Sinorhizobium medicae: Smed_3981
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Entry
Smed_3981 CDS
T00555
Name
(GenBank) GntR domain protein
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_3981
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Smed_3981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
Rrf2
HTH_11
HTH_5
HTH_41
HTH_Crp_2
MarR
MarR_2
TrmB
2_5_RNA_ligase2
Fe_dep_repress
PaaX
TFIIE_alpha
HTH_54
HTH_28
RPA_C
Motif
Other DBs
NCBI-ProteinID:
ABR62789
UniProt:
A6UGK9
LinkDB
All DBs
Position
pSMED01:431641..432342
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AA seq
233 aa
AA seq
DB search
MGLQEGTPRKGLPDIVFERMHRAIKSGAYKPDERLPTEHELATEFEVSRPIVREALRRLR
EQGLIYSRRGAGSFVRATGLREPLGFGQLENVADLLNCYEFRLTLEPAAAAAAALRHDET
SLAAIRRALELLRDATNRQSHREDADFQFHLAIARAAQNSYFSTAMEALKEHIAVGMKFH
GISVKREASGLSRVFAEHEAIADAIAAGNAEDARILMLKHLTGSRDRLFLASQ
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgggactgcaggaagggaccccccgcaagggcctgcccgacatcgtgttcgaaagaatg
caccgggcgatcaagtccggcgcttataagcctgacgagcgtttgccgaccgaacatgag
ctggcgacggagttcgaggtatcccgaccgatcgttcgtgaggcattgcggcgcctcagg
gaacagggactcatttactcgcggcgcggcgcggggagtttcgtgcgcgccacgggactt
cgcgaaccgctgggcttcggtcagctggaaaacgtcgccgatctcctgaactgctatgag
ttccggctgacactggaacccgccgccgcggccgccgccgcgctccggcacgacgagacg
agccttgcagcgatccgccgggcgctcgaactgctgcgtgacgccaccaatcggcagtct
caccgcgaggacgctgacttccagttccatcttgcgatcgcccgcgctgcccagaacagc
tacttctcgaccgccatggaggcgctgaaggaacacattgccgtcggcatgaagttccat
ggcatctcggtgaagcgcgaggcaagcggcctctcgcgcgtgttcgcggaacacgaggcg
attgccgacgccatcgccgccggcaacgccgaagacgctcgcatattgatgctgaagcat
ctgaccgggtcgcgcgaccgcctgttcctcgcctcgcagtag
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