Sinorhizobium medicae: Smed_6308
Help
Entry
Smed_6308 CDS
T00555
Name
(GenBank) transcriptional regulator, GntR family
KO
K05836
GntR family transcriptional regulator, histidine utilization repressor
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_6308
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Smed_6308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_Crp_2
HTH_IclR
HTH_24
MarR_2
MarR
DUF1293
AbiEi_4
TrmB
HTH_23
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABR64905
UniProt:
A6UMM5
LinkDB
All DBs
Position
pSMED02:complement(1222543..1223274)
Genome browser
AA seq
243 aa
AA seq
DB search
MNTLSDSASPLYEKVKDFVLGNIGSGKWARNSRLPSENELVSALGVSRMTVHRALRELTS
EGHLRRIQGVGTFVAPPRPRSTLIEISNIITEIKTRGSRHRAEVVVLERIARPEPELLLA
FEFETVKPVDHSVVIHFENDLPVQLEERYVNPNLVSGYADQDFTTVATYDYLQNATPLTE
VEHLISALPAGADQAGLLHIRPGDCCLVLHRKTWTGPVVATVNTFTYVGSRYSLGSRYLH
GGK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctttcagattccgcatcgccgctctacgagaaggtaaaagactttgtcctc
ggtaacatcggcagcggcaaatgggcgcgcaacagccggcttccctcggagaacgaactc
gtttcggcactcggtgtctcgcgcatgaccgttcaccgggcgctgcgggaactcacctcc
gaggggcatctgcgccgcattcagggggtgggcaccttcgttgcgccgcccaggccccgg
tcgacgctgatcgagatcagcaacatcattaccgaaatcaagacgcgcggtagccggcac
cgcgccgaggtggtcgtgctcgagcggatcgcgcgaccggaaccggagcttctgctcgcc
ttcgaattcgagacggtaaagcccgtcgatcattccgtcgtcattcatttcgagaacgac
ctgccggttcagcttgaggaacgttacgtcaatcccaacctcgtttccggctatgccgac
caggattttactaccgtcgccacctatgactacctgcagaacgccacgccgctgaccgag
gtggagcatctcatcagcgctctgccggccggcgcggaccaggctggtctgctgcacatt
cgccccggcgactgctgcctggtcctgcaccgcaagacctggacaggaccggtcgtcgca
accgtcaataccttcacctatgtcggcagccgttattcgctcggcagccgctatctgcac
ggcggcaagtga
DBGET
integrated database retrieval system
