Sinorhizobium meliloti 1021: SMa0870
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Entry
SMa0870 CDS
T00058
Symbol
nodD1
Name
(GenBank) NodD1 nod-box dependent transcriptional activator
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
sme
Sinorhizobium meliloti 1021
Module
sme_M00664
Nodulation
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sme03000
]
SMa0870 (nodD1)
Transcription factors [BR:
sme03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SMa0870 (nodD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AAK65134
RhizoBase:
SMa0870
UniProt:
P03031
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All DBs
Position
pSymA:481810..482736
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AA seq
308 aa
AA seq
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MRFRGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGREL
IPTPRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVA
REAPGVSFELLPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNKK
LLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGTN
RIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILLQEASR
IDPQSDTC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaggggcctagatctaaacctcctcgtcgcgctcgacgcactgatgaccgag
cgcaagctcacggccgccgcacgccggatcaacctcagtcaaccggccatgagcgcggct
atcgcgcgcctgcgcacctatttcggcgacgagctgttttcgatgcagggccgcgaactt
atcccgacaccgcgtgccgaggcacttgccccagccgtgcgcgacgccttactgcacatt
cagctttccgtcattgcctgggatccactaaacccggcccagtcggatcgccgtttcagg
atcatcctttcggatttcatgatacttgtattctttgcgaggatcgtggaacgcgtggct
cgggaggctcccggcgtcagcttcgagttgctgcctctcgatgatgatccccatgagctt
ctccggcgcggggatgttgattttctgatttttccagacgtgttcatgtcgagcgcgcat
cccaaagcgaaattgttcgacgaggcactcgtgtgcgtcggctgccccaccaacaagaag
ctattggggaacatctcgttcgagacctatatgtcgatggggcatgttgcagcccagttc
ggacgagaaatgaagccctccgtcgagcaatggctattgcttgagcacggcttcaatagg
cgtatcgagcttgttgtgccaggttttaccttaatcccacgcctattgtcgggtactaac
cgaatagcaactttaccattgcgtttggttaaatatttcgaacaaacgataccactgcgc
atagtcacatctccgctgccgcccctctttttcactgaagctatccagtggcccgccctt
cacaacactgatccaggaaacatttggttgcgggagatactgttgcaagaggcgtcgcgc
attgatcctcagtcggacacctgttag
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