Sinorhizobium meliloti 1021: SMc01645
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Entry
SMc01645 CDS
T00058
Symbol
prbD
Name
(GenBank) PrbD ABC transporter ATP-binding protein, mediates the uptake of proline betaine at both high and low osmolarities
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
sme
Sinorhizobium meliloti 1021
Pathway
sme02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMc01645 (prbD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sme02000
]
SMc01645 (prbD)
Transporters [BR:
sme02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SMc01645 (prbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
oligo_HPY
AAA_22
RsgA_GTPase
AAA_23
AAA_16
AAA_25
nSTAND3
nSTAND1
ATP-synt_ab
DUF87
ABC_ATPase
Mg_chelatase
AAA_15
NB-ARC
Sigma54_activat
AAA_24
NACHT
ATPase
MMR_HSR1
AAA_5
sCache_3_2
DUF2813
Motif
Other DBs
NCBI-ProteinID:
CAC46836
RhizoBase:
SMc01645
UniProt:
Q92NE8
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All DBs
Position
2440335..2441966
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AA seq
543 aa
AA seq
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MPELLSVKNLKIEATSYPPGEPPKVVTLVEDVSFDLQKGKVLGLIGESGAGKSTIGLSAL
AYGRGGCRITGGEVLLNGRDILKLGRGGINSVRGRHVCYVAQSAAAAFNPAHKLGDQVIE
ASLRHGIMNRDEATKRALYLFRVLGLPNPETFGDRYPHQVSGGQLQRAMTAMALCPNPEL
IVFDEPTTALDVTTQIDVLAAIKHAIEETDTAALYITHDLAVVAQISDDIMVLRHGKTVE
YGTTKQVIEAPREEYTRALVSVRQAKRDEAPDQTDTLLKIEHVHAGYANGFKVLHDVSMH
LPKGQTLAIVGESGSGKSTLARVITGLLPPSEGRITFEGKELPKALKGRTNDELRRIQMI
YQMADTAMNPRQTVREIVGRPLSFYFGMHGAKKTERVKELLDQIEMGTRFLDRYPAELSG
GQKQRVAIARALAAKPELILCDEPTSALDPLVAEGILNLLLKLQEETAVSYVFITHDIAI
VRAIADSVAVMHRGRLVRFGPKSKVLSPPFDDYTDLLLKSVPEMEIGWLEKVLKTRRMES
AGN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgctttccgtcaagaacctgaagatcgaagcgacgagctatccgccgggc
gaaccgccgaaagtggtgacgctggtcgaggacgtttccttcgatcttcaaaagggcaag
gtgctgggtctgatcggcgagtccggcgccggcaagtcgacgatcggcctctcggcgctc
gcctatggccgcggcggttgccgcatcaccggcggcgaggtgctgctcaacggccgcgac
atcctgaagctcggccggggcggaatcaattcggttcgtggacgtcatgtctgctacgtg
gcgcaatccgccgccgcagccttcaatcccgcccacaagctcggcgaccaggtgatcgag
gcgtctctgcgccacggcataatgaaccgtgacgaggcgaccaagcgtgcgctctatctc
ttccgggtgctcggccttcccaatccggaaaccttcggagaccgctacccccatcaggta
tcgggcggacagttgcagcgcgccatgaccgccatggcgctctgccccaacccggaactg
atcgtcttcgacgagccgaccacggcgctcgacgtcacgacccagatcgacgtgctcgcc
gcgatcaagcacgcgatcgaggagaccgataccgcggccctctacattacccacgatctt
gcagtcgtcgcccagatctccgacgacatcatggttctgcgccacggcaagaccgtcgag
tacggcaccaccaagcaggtgatcgaggctccgagggaagaatacacccgcgccctcgtc
agcgtccgccaggcgaaacgcgacgaagctccggaccagaccgacacgcttctcaagatc
gaacatgtgcatgccggttacgccaacggcttcaaggtattgcacgacgtctcgatgcac
ctgccgaagggccagacactggcaatcgtcggcgaatcgggctcaggcaaatcgacgctc
gcgcgcgtcatcacgggcctgctgccgccgagcgaagggcgcatcaccttcgaaggaaag
gaactgccgaaggcgctgaaaggcaggacgaacgatgagctgcgccggatccagatgatc
tatcagatggccgacacggcgatgaatccgcgccagacggtgcgcgagatcgtcggccgg
ccgctctccttctacttcggcatgcacggcgccaaaaagaccgagcgggtgaaggaactg
ctggaccagatcgaaatggggacgcgcttcctcgatcgttacccggccgagctctccggc
ggacagaagcagcgcgtcgctatcgcccgggcgctcgccgccaaaccggagctcatcctg
tgcgacgagccgacctcggcgctcgatccgctggtggcggaaggcatcctcaacctgctc
ctgaagctgcaggaggaaaccgcggtttcctatgtcttcatcacccatgacatcgccatc
gtccgggcaatcgccgacagcgtcgccgtcatgcatcgcggccggctggtgcgtttcggc
ccgaaatcgaaggtcctttcgccgcccttcgacgattataccgatcttctcctgaagtcg
gttcccgaaatggaaatcggctggctggaaaaggtgctgaagacgcggcggatggagagc
gccggcaattga
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