KEGG   Sinorhizobium meliloti 1021: SMc01929
Entry
SMc01929          CDS       T00058                                 
Name
(GenBank) Hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sme  Sinorhizobium meliloti 1021
Pathway
sme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMc01929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sme03019]
    SMc01929
Messenger RNA biogenesis [BR:sme03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SMc01929
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Lactamase_B_3
Other DBs
NCBI-ProteinID: CAC45860
RhizoBase: SMc01929
UniProt: Q92QN7
LinkDB
Position
1394904..1396571
AA seq 555 aa
MAQDEELVFLPLGGVGEIGMNLGLYGYGRPGHRQWIMVDCGVTFPGPELPGVDLVLPDIA
FLAEQRRNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRAFEKSRSEIP
ITIFKQGDRINVGPFSVEAVGVNHSIPEPMALVIRTQLGTVVHTGDWKIDLEPSLGPLTD
ESRFRQIGEEGVLALVCDSTNALREGVSPSERQVSESLAKIIADAEGRVGITTFSSNVGR
IRSVAEAAEAAGREVLLLGSSMKRVVDVARDVGLMEGVKPFLAEDEFGYIPRDKVVVILT
GSQGEPRAALAKIARDEMRNVAFSAGDTIVFSSRTIPGNEKAINDIKNGLIEQGIHIITD
SEALVHVSGHPRRTELQQMYQWVKPQILVPVHGEAAHLTAHAELGLQSGIPSVPRLRNGE
MLRLAPGPAEVIDEAPHGRIYKDGTLIGDFEEMGIGERRKLSFAGHVSVSVVLDSRYDFL
GDPDVVPIGLPEFDDEGEAMEDTLYDAVLGAVESIPRAKRKDLAMLQEAVRRAVRSTTNQ
VWGKKPVVTVFITKV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcgcaggatgaagaactggtgttcttgccgctcggcggcgtcggcgaaataggcatg
aatctcggcctttacggttatggaaggccaggccaccgccaatggatcatggtcgattgc
ggcgtgaccttccccggcccggaattgcccggcgtagatctggttctgcccgatatcgcc
tttctggccgaacagcgccgcaacctgaaggcgatcatcatcacgcatgcgcatgaggac
cattacggggctctgaacgatctgtggccgggcctgaacgttcccgtctacgcctcgccc
tttaccgcgggcatgctggaggccaagcgcgcattcgaaaagtcccgcagtgagatcccg
atcacgatcttcaagcagggcgaccgcatcaatgtcgggcctttcagcgtcgaagccgtg
ggggtcaatcattcgatccccgagccgatggcgctcgtcatccgtacgcaactcggcacc
gtcgtgcacacgggcgactggaagatcgatctcgagccttcgctggggcccctgaccgac
gagtcgcggtttcgccagatcggggaggaaggcgtcctcgcgctcgtctgcgattcgacc
aatgccttgcgcgaaggcgtgtcgccgtccgaacggcaagtctccgaaagtctcgccaag
atcattgccgatgccgagggccgcgtcgggatcaccaccttctcctccaatgtcgggcgc
atccgctctgttgcggaagcggcggaggctgcggggcgggaggtgcttctactcggcagt
tcgatgaagcgcgtcgtcgacgttgcgcgcgatgtcgggctcatggaaggcgtgaagccg
ttcctcgcagaggacgagttcggctacatcccgcgcgacaaggtcgtggtcatcctgacg
ggcagccagggcgagccgcgcgcggcccttgccaagatcgctcgcgacgagatgcgcaac
gtggcgttttcggccggcgacacgatcgtattttcgtcgcgcaccatccccggcaacgaa
aaagcgatcaacgacatcaagaacgggcttatcgagcaaggcatccacatcatcacggat
agcgaggcgctggtgcatgtttccggccatccgcggcgcaccgagctccagcagatgtac
caatgggtgaagccgcagatcctcgtgccggtgcatggcgaggcggcgcatctgacggca
catgcggagctcgggctgcaatcgggcatcccgagcgtgccgcggctgcgcaatggcgaa
atgctacgacttgcgccgggccccgcggaagtcatcgacgaggcgccgcacggccgcatc
tacaaggacggcaccctcatcggcgatttcgaagagatggggataggcgaacgccgcaag
ctttcctttgccggccacgtctccgtcagtgtcgtactcgacagccgctacgactttctg
ggtgacccggacgtcgtgccgatcggccttccggaattcgacgacgaaggcgaggcgatg
gaggacacgctctatgatgcggtgctcggcgccgtggaaagcatcccgcgggcaaagcgg
aaggacctcgcgatgctgcaggaagccgttcgccgcgccgtgcgcagcaccacgaaccag
gtctggggcaagaagccggtcgtgacggtttttatcacgaaggtctga

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