Sulfitobacter mediterraneus: JNX03_06260
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Entry
JNX03_06260 CDS
T07747
Name
(GenBank) acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed00280
Valine, leucine and isoleucine degradation
smed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JNX03_06260
Enzymes [BR:
smed01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
JNX03_06260
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
DUF3182
GARS_A
DUF2118
Motif
Other DBs
NCBI-ProteinID:
QRD43677
LinkDB
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Position
complement(1275293..1277239)
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AA seq
648 aa
AA seq
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MFDTILIANRGEIACRVMETAQAMGVRCVAVYSDADRAAKHVQMADLAVHIGGSAPAESY
LKGDVIIQAALETGAQAIHPGYGFLSENPDFVEAVEKAGLTFIGPSASAIRAMGLKDAAK
ALMVEAGVPVVPGYHGADQDDALLAAEAEKIGYPVLIKAVAGGGGKGMRLVEKAGAFQAA
LDSARSEAKTAFGNSDVLVEKFVTKPRHIEVQVFGDGTKAVHLFERDCSLQRRHQKVIEE
APAPDMPQDVRDAMGQAAVRAAEAIGYAGAGTVEFIVDGSGGLRADGFFFMEMNTRLQVE
HPVTELITGVDLVEWQLRVAAGESLPKQQGELSISGHAFEARLYAEDVPKGFLPATGTLT
HLQFTPQTRADSGVRAGDTISPFYDPMIAKVIVHGPNRDVALSRLRAALSGCQVGGTVTN
LAFLGALAAHEGFGKGEVDTGLIARDIDALTAAPEIAPRHAALAGMAALGLLETQAETGF
TLWRALRRQIMLGWGGEEHLLKVRVISPDEQHWTLGEDEVQALRRGGRWTIGGQPAADVA
ISGATVTVFEGYGMAFDVIDPLLRAAGAQGDGNLIEAPMPGLVRAVDAKVGQAVAKGDRL
AVLEAMKMEHSLLAARDGVVAEVLATAGDQVEAGAALVRLEAEEEAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacacgatccttattgcgaaccggggcgagattgcctgccgggtgatggaaacg
gcgcaggctatgggtgtgcgttgcgtggcggtgtattctgatgcggaccgcgcggcaaaa
catgtgcagatggcagatctggctgtgcatattggcggctccgccccggcggaaagttat
ctgaagggtgatgtgatcattcaggcggcgctggagaccggcgcacaggcgatccatccc
ggctatggctttctgtccgagaaccccgattttgtggaggccgtcgagaaggccggtttg
acctttatcgggccatcggcatcggccattcgggcgatgggcctgaaggatgcggccaag
gcgttgatggtggaggccggcgtgccggtggtgccgggctatcatggggcggatcaggac
gatgcgctgctggcagccgaggccgagaaaatcggctatccggttctgatcaaggcggtc
gcaggcggcggcggcaagggcatgcgattggtcgaaaaggcgggcgcgttccaggcggcg
ctggactcggctcgctctgaggccaagaccgcctttggcaattcggatgttctggttgag
aaatttgtgaccaagccgcgccatatcgaggtgcaagtctttggtgatggcaccaaggcg
gtgcatttgttcgagcgcgattgttccttgcagcgccgccatcagaaggtgatcgaagag
gcacccgcgccggatatgccgcaggatgtgcgcgatgccatgggccaggcggcggttcgg
gccgccgaggcgattggctatgccggggccggcaccgtagagtttatcgtggacggctcg
ggcggattgcgcgcagatggtttctttttcatggagatgaacacccgcttgcaggtggaa
caccccgtgaccgagttgatcaccggtgttgatctggtggaatggcagctgcgcgtggcg
gcgggcgagagcctgccgaagcagcagggcgaattgtcgatcagcggtcacgccttcgag
gcgcggctttatgccgaggatgtgccaaagggatttttgcccgcgaccggcacgttgacg
catttgcagttcaccccgcagacccgtgccgacagcggtgtgcgggcgggcgataccatc
agcccgttttatgatccgatgattgccaaggtgattgtgcatgggccgaaccgtgatgtg
gccctgtcgcgcctgcgtgcggcactgagcggttgtcaggtgggcggcaccgtgaccaat
ctggccttcctcggcgcgcttgccgcgcatgaagggtttggcaagggcgaggtcgataca
ggcctcattgcccgcgacattgatgcgctgacagccgcaccggagattgcaccgcgccat
gcggcgctggccggaatggcggcgctgggcctcttggagacccaggccgagacgggattc
accctgtggcgggcgctgcggcgtcagatcatgctcggctggggcggcgaggaacatctg
ctgaaagtgcgggtgatctcaccggatgaacagcattggaccttgggcgaggacgaagtg
caggccctgcgccggggggggcgctggaccattggcggccaacctgcggcggatgtggcc
atctcgggcgcgacagtcactgtgtttgagggttacggaatggcctttgacgtgattgac
ccgctgttgcgggcggcaggggcgcagggtgacggcaaccttatcgaggcgccaatgccc
ggtttggtccgcgccgttgatgccaaagttggtcaggccgtggccaagggcgaccgcttg
gcggtgcttgaggcgatgaagatggagcattctttgttggcggcccgtgatggggttgtg
gccgaggttctggcgacagcaggtgatcaggttgaagctggggcagcacttgttaggttg
gaggccgaagaggaggccgctgcatga
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