Sinorhizobium meliloti GR4: C770_GR4Chr1955
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Entry
C770_GR4Chr1955 CDS
T02405
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C770_GR4Chr1955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeg03400
]
C770_GR4Chr1955
DNA repair and recombination proteins [BR:
smeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C770_GR4Chr1955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C770_GR4Chr1955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
UB2H
SWI2_SNF2
Microtub_bd
YscJ_FliF_C
Motif
Other DBs
NCBI-ProteinID:
AGA06883
LinkDB
All DBs
Position
2033558..2036515
Genome browser
AA seq
985 aa
AA seq
DB search
MARSTKNSPKKSSAPDGFEEAPQAPLSGTPLSGNVSDWVKQLESEAEASTFESRREVASK
AGRHRKKVEISASKSARGTSMGGTTDPKTRAAAGLNPVAGLDVALEDADKLTSGSGVTAT
VEALAKLIESGNPLFKDGKLWTPHRPARPEKSEGGIAIRMQSDYEPAGDQPTAIADLVDG
LTSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPDNAVE
YFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDVIIVASVSCIYG
IGSVETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFPAHL
EDAAWRISMFGDEIDSITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLNAAIKAIKEEM
SQRLAELERAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRRPGEPPPTLFE
YIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRP
DTIAVSATPGAWEMEQAGGVFAEQVIRPTGLIDPPVEVRSAKTQVDDVLGEIRETAAAGY
RTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLR
EGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADTITGSMQRAMEE
TSRRREKQMAYNAEHGITPESVKAKISDILDSVYERDHVRADISGVAGKGFADGGHLVGN
NLQAHLNALEKQMRDAAADLDFEKAARLRDEIKRLKAAELAVLDDPMAREEAKSQESSKR
ASKGVPGTTDSLPLVGSVGEAKSDGEGKTQSYFQKPSLDNMGPGTDTERPLFRKPELDEM
GRDVAIPSSRGREEGARKADEGQSLFRKNTLDEMTVGRTEKPVPGQAPEKPTLTRAKPGV
GSYEDPAEEKRRKSRTKGKTGRPGR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcaacgaagaattccccgaagaaatcgtcggcacccgacggtttcgaagaa
gccccgcaggcgccgctttccggtacgccgctctccggcaatgtctccgactgggtgaag
cagctcgaatcggaagcggaagcgagcaccttcgagagccggcgcgaggttgcctccaag
gccggcaggcatcgcaagaaggtggagatctccgcgtcgaaatcggcccgcggcacatcg
atgggcggaacgaccgatccgaagacgcgagcggccgcggggctcaatccggtggcaggc
ctcgatgtcgccttggaggatgccgacaagctcacctcgggctccggcgtcaccgccacc
gtcgaggcgcttgcgaagctcatcgagagcggcaatccgctgttcaaggacggcaagctc
tggacgccgcaccgcccggcccggcctgaaaagtccgaaggcggcatcgcgatccgcatg
caatcggactacgagccggccggagaccagccgacggcgatcgcggacctggtcgacggc
ctcacctcgggcgagcgcaatcaagtgctgctcggcgtcaccggctcgggaaagaccttc
accatggccaaggtgatcgaggcgacacagcgcccggccgtcattctggccccgaacaag
acgctcgcggcgcagctctactccgagttcaagaacttcttcccggacaacgcggtcgaa
tatttcgtctcctattacgattactaccagccggaagcctacgtcccgcgctcggacacc
tatatcgagaaggaatcctcgatcaacgagcagatcgaccgtatgcgccactcggcgacg
cgttcgctgctcgaacgcgacgacgtcatcatcgtcgcctcggtctcctgcatttacggt
atcggctcggtcgagacctatacggcaatgaccttccagatgagtgtcggcgaccggctc
gatcagcggcaactcctggccgacctcgtagcgcagcaatacaagcgccgcgacatggat
tttcagcggggctccttccgcgtgcgcggcgacacgatcgaaatctttcccgcccacctg
gaagatgccgcttggcgcatctcgatgttcggagacgagatcgactcgatcaccgagttc
gatccgctcaccggccagaagaccggtgacctcaagtcggtgaagatctacgccaattcg
cactatgtgacgccgcggccgacgctgaacgccgcgatcaaggcgatcaaggaggaaatg
agccagcgcctcgccgaactggaacgcgccgggcgccttctggaagcgcagcggctggaa
cagcgcacccgttacgacatcgagatgctcgaggccaccggctcctgccagggcatcgag
aactattcgcgctatctcaccggccgcaggccgggcgagccgccgccgacgctgttcgaa
tatattcccgacaatgcgctgatcttcatcgacgagagtcacgtcaccattccgcagatc
ggcggcatgtatcgcggcgacttccgccgcaaggcgacgctcgccgaatacggtttccgc
ctgccctcctgcatggacaaccggccgctgcgcttcgaggaatgggacgcgatgcgcccc
gacaccatcgccgtgtcggcaacccccggcgcctgggagatggaacaggccggcggcgtc
ttcgccgaacaggtgatccgtccgaccggcctcatcgatccgccggtggaggtgcgctcc
gccaagacgcaggtggacgacgtgctcggcgagatccgcgagaccgcagccgcgggctac
cgcaccctcgtcaccgtgctcaccaagcgcatggccgaggacctgaccgaatatctgcac
gaacagggcgtgcgggtgcgctacatgcattccgacatcgacacgctggagcgcatcgag
atcatccgcgacctgcgcctcggcgccttcgacgtgctggtcggcatcaacctcctgcgc
gagggtctcgatattcccgaatgcggcttcgtcgccattctcgacgccgacaaggaaggc
ttcctgcgctcggaaacgtcgctcatccagacgatcggccgcgccgcccgtaacgtcgac
ggcaaggtcatcctctatgccgacacgatcaccggctcgatgcagcgggcgatggaggag
accagccgccgccgcgagaaacagatggcctacaatgccgagcacggcatcacgcccgaa
tcggtcaaggcgaagatctccgacatcctcgattcggtctacgaacgcgaccatgtccgc
gccgatatctccggcgtcgccggcaagggctttgccgatggcggccacctcgtcggcaac
aatctccaggcgcacctcaacgcactcgaaaaacagatgcgcgacgccgccgcggacctc
gacttcgaaaaggccgcacgcctgcgcgacgagatcaagcgcctcaaggcggccgaactg
gcagtgctggacgatccgatggcgcgagaggaagcgaaatcgcaggagagcagcaagcga
gccagcaagggggtgcccggcacaacggactccctcccccttgtggggagtgttggggag
gcgaaaagcgatggggagggaaagacacagtcctacttccaaaagccctcgctcgacaat
atgggaccggggaccgacaccgaacgtcccctcttccgcaaacccgaactcgatgaaatg
ggccgcgacgtggcgatcccttcttcccgcggccgagaagaaggtgcccgaaaggcagat
gaggggcagtcgctattcaggaaaaacaccctggacgaaatgaccgtcggccgcacggag
aagccggtaccgggacaggcaccggagaagccgaccctcacccgcgccaagccgggcgtg
gggtcctacgaggatccggcggaggaaaagcggcgcaagagccggacaaagggcaagaca
gggcgtccgggacggtga
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