Silurus meridionalis (southern catfish): 124376415
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Entry
124376415 CDS
T08004
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
Organism
smeo
Silurus meridionalis (southern catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_4
LRR_8
Sif
Motif
Other DBs
NCBI-GeneID:
124376415
NCBI-ProteinID:
XP_046691444
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Position
22:1035518..1072586
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AA seq
1307 aa
AA seq
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MDPTIENAGTLPGDSQTQLKRSNSPDDSCVSMKSESSMNSPLEFKDGDRSSGHSQTQLKR
PDSPLDSCVSMKSESSMNSPPEFKDGDRSSGHSQTQLKTVDSLVHRSVCASINSPPEFKD
GDPKSGHSQTQLTRSDLLLDSHRVFMKSELSMNSPLEFKDGDPQSGHSALERVTEKTEQK
IRIRDTGYTSVTTGPHVQERCKLNLVKKFQHLNEVMTNRRNPTLLNEIYTDLYITEGDSG
KVNNEHEVRQIEAASRRAATAETPIKCSEIFKPLSEEDKPIRIVLTKGVAGIGKTVSVQK
FILDWAEGKTNQDVLLIFPLPFRELNLMKNQKRSLVELLHFFLKEQKETNISRLDKVLFI
FDGLDECRFSLDFRNTVRLCDVTEPASVDVLLINLIKGNLLPSALIWITSRPAAADQIPP
ECVDRVTEVRGFNDPQKEEYFRKRISDQSLSSRIITHLKSLRSLYIMCHIPVFCWISATV
LERMLGEAESGEIPKTLTQMYTHFLIIQTNFIRKKYTKSQEADKEMLLKLGKLAFQQLMK
GNLIFYEEDLMECGIDVKEASVYSGVCTQIFREEFGLHQSKVYCFVHLSIQEHLAALYVH
LTFINEKKNVLKNNLFYKILMLFRKPKMSDVHKSAVDQALQSKNGHLDLFLRFLLGLSLE
SIQNLLQTIMTQTGSSSHKTQETVVYIKKKIRKNPSTEKSINLFHCLNELEDHSLVEEIQ
LYLQSGNLQKSKLSSSQWSAVVFVLLTSAQEQDVFDLNKYSSKHCTSEEVLLKLLPVVAA
SRKADCSNCDLKEKGCSALASVLSSESSSLRELDLSKNKLRDTEVKCISAGLGNPHCNLE
ILSLCYCGVSDEGIAALTSALRSNPSHLRELDLTGNYLRDSGVERLSDVLENPQCKLEIL
RLYDCVSDEGCAALTSALRSNPSHLRELDLCKNKLGDSEVECLSAVLKNPHCKLEILRLC
GCGVSDEGCAALTSALGSNPSHVKKLDLTGNTLGDKGVKCLSAVLENPHCKVETLRLRRC
DVSDEGFATLTSALRSNPSHLRELDLSENKLKDSAVQCLSAVLENPHCKLEILSLCRFYM
SDEGIAALTSALRSNPSHLRELDMSGNKLRDSGVKHFSAVLENPQFNLEILRLCGCEISD
EGCAALTSALRSNPSHLRELELTGNTLRDSGVKHLSAGLENPQCKLEILRLRNCGVSEAG
CDALALALRSDPSHLRELDLTENELKSSGVKRLSAGLENPHCKLEKLRLCNCGVTDEGCV
ALASALKSNPSHLRELNLSGNKLKDSEKKLLSSLKDDKRYKLQILMM
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggaccctacaatcgaaaatgctggcacattacctggagacagtcaaacccagctaaaa
agatccaactcaccggacgacagctgtgtctccatgaagagtgaatcctctatgaattct
cctctggaattcaaggatggagatcgctcatctggacacagtcaaacccagctaaaaaga
ccagactcaccgttagacagctgtgtctccatgaagagtgaatcctctatgaattctcct
ccggaattcaaggatggagatcgctcatctggacacagtcaaacccagctaaaaacagtc
gactcactggtacacagaagtgtctgtgcatctataaattctcctccagaattcaaggat
ggagatcccaaatctggacacagtcaaacccagctaacaagatctgatttactgttagac
agccaccgtgtcttcatgaaaagtgaattatctatgaattctcctctagaattcaaggat
ggagatccccaatctggacacagtgccctagagcgagtgacagagaaaacagaacagaag
atcagaatcagagatacagggtatacatctgtaaccactggacctcatgttcaggagaga
tgcaaattaaatctggtaaagaagtttcagcacttgaatgaggtgatgacaaaccggaga
aacccaacacttctcaatgagatctacacagatctctacatcacagaaggagacagtgga
aaagtcaataatgaacatgaggtgagacagatcgaggcagcatccaggagagcagcaaca
gcagaaacacctattaaatgcagtgagatctttaagcccttatctgaagaagacaaaccc
atcaggatcgttctgacaaagggagtcgctggcattggaaaaacagtctctgtgcagaaa
ttcattctagactgggctgaagggaaaacaaatcaggatgttctgctcatatttccactt
cctttcagagagctcaatctgatgaagaatcaaaaacggagcctggtggagcttcttcac
ttctttttgaaggagcaaaaagaaacaaatatttccagactggacaaagttctgttcatt
tttgatggtttggatgagtgtcgtttctctctggatttccggaacacagtgagattgtgt
gatgtaactgaaccagcatcagtagatgttctgctgataaacctgatcaaaggaaacctg
cttccctctgctctcatctggatcacctccagaccagcagcagctgatcaaatcccccct
gagtgtgtagatcgagtcacagaggtacgagggttcaatgaccctcagaaggaggaatat
ttcaggaagaggatcagtgatcagagcctgagcagcagaatcatcacacacctgaagtca
ttaagaagcctttacatcatgtgccacatcccagtcttctgctggatttcagccactgtt
ctagagagaatgttgggtgaagcagagagtggagagatccccaagactctgactcaaatg
tacacacacttcctcatcattcagaccaacttcataagaaagaagtacacaaagagccaa
gaggcagataaagaaatgcttctgaaactggggaaactggcttttcagcagctgatgaag
ggcaacctgatcttctatgaggaagacctgatggagtgtggcattgatgtgaaagaagca
tcagtgtattcaggtgtgtgtacacagatcttcagagaggagtttgggcttcaccagagt
aaagtgtactgttttgttcatctgagcattcaggaacatctcgcagctctgtatgtgcac
ctgacttttattaatgaaaagaaaaatgttctgaagaacaatctgttttataaaatttta
atgctgttcaggaaacccaagatgtcagatgttcacaagagtgctgtagatcaggcttta
cagagtaaaaatggacatctggatctttttcttcgctttcttctgggtctctcactggag
tccattcagaacctactacaaaccataatgacacagacaggaagtagctctcacaaaaca
caggaaacagttgtttacatcaagaagaagattagaaaaaatccctcaacagagaaatcc
attaatctgttccactgtctgaatgaactggaagatcattctctcgttgaggaaatccaa
ctgtacctgcaatctggaaatttacaaaaaagcaaactgtcttcttctcagtggtctgct
gtggtgtttgtgttactgacatcagcacaggaacaggatgtgtttgaccttaataaatat
agcagcaaacactgtacatcagaggaggttctactgaagctcctgcctgtggttgcagca
tccagaaaagctgattgtagtaattgtgacctgaaagaaaaaggctgttcagcattggcc
tcagtgctcagctctgaatcctccagtctcagagaactggatctttctaagaataaactc
agagacacagaagtaaagtgtatttcagctggactggggaatcctcactgtaacctggag
atactgagcttgtgttattgtggtgtctcagatgaaggtattgctgctctgacttcagct
ctgagatcaaacccctcacatctgagagaactggatctgactgggaattacctaagagac
tcaggagtggagcgtctctctgatgtactggagaatcctcaatgtaaactggagatactg
aggttgtatgattgtgtctcagatgaaggttgtgctgctctgacttcagctctcagatca
aacccctcacaccttagagaactggatctgtgtaagaataaactcggagactcagaagtg
gagtgtctctcagctgtactgaagaatcctcactgtaaactggagatactgaggttgtgt
ggttgtggtgtctcagatgaaggttgtgctgctctgacttcagccctgggatcaaacccc
tcacatgtgaaaaaacttgatctgactgggaatacacttggagataaaggagtgaagtgt
ctctctgctgtactggagaatcctcactgtaaagtggagacactgaggttgcgtagatgt
gatgtctcagatgaaggttttgctactctgacttcagctctgagatcaaacccctcacac
ctgagagaactggatctgtctgagaataaacttaaagattcagcagtgcagtgtctctct
gctgtactggagaatcctcactgtaaactagagatactgagcttgtgccgattttatatg
tcagatgaaggtattgctgctctgacttcagctctgagatcaaacccctcacacctgaga
gaactggatatgtctgggaataaactcagagactcaggagtgaagcatttctctgctgta
ctggagaatccacaatttaacctggagatactgaggttgtgtggttgtgaaatctcagat
gaaggttgtgctgctctgacttcagctctgagatcaaacccctcacacctgagagaactg
gaactgactggaaatacactcagagactcaggagtgaagcatctctctgctggactggag
aatcctcaatgtaaactggagatactgaggttgcgtaactgtggtgtctcagaggcaggt
tgtgatgctctagctttggctctgagatcagacccctcacacctgagagaactggatctg
actgagaatgaactcaaaagttcaggagtaaagcgtctttctgctggactggagaatcct
cactgtaaactggagaaactgaggttgtgtaattgtggtgtgacagatgaaggttgtgtt
gctctggcttcagctctaaaatcaaacccctcacacctgagagaacttaatctgtctgga
aataaactcaaagactctgaaaagaagctgctctccagtcttaaagatgataaacgttac
aaactccagatcctgatgatgtaa
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