Silurus meridionalis (southern catfish): 124378017
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Entry
124378017 CDS
T08004
Symbol
pcdh8
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8
KO
K16499
protocadherin delta 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124378017 (pcdh8)
Cell adhesion molecules [BR:
smeo04515
]
Cadherins
Protocadherins
124378017 (pcdh8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
124378017
NCBI-ProteinID:
XP_046693420
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All DBs
Position
24:14114393..14118403
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AA seq
949 aa
AA seq
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MEMKNFLLGFSLVLIHSAWTVRGTTTKYYTYEEDAPGTFIGNLSTDLKLDLSEDPHTRFR
FMQEANASLIRLRQSDGLLTVGERIDRENLCGSSAQCVLTADVVVFSKEKFHLIHVEIHV
RDINDHAPVFPRGETRLEISENTDVDARFPIEVAADLDVGNNYIQTYQLINSSHFGIEVG
TGEDGKKFAQLVLAQKLDRELEDIYTLQVVASDGGSPPKSGSITVRVKVLDSNDNSPQFE
HDTIRVELHEDAPVGFLLLRVQALDPDHGENGDVRYDLADGESNEITSTFEVDPYSGALS
LRSSVDYETKKTYELRIRAYDLGSDSVPSTCTVTVEIVDVNDNAPEVTIKPMAPRSADVA
YITEAAAVDSFVALVSATDRDSGANGYVRVGLHGHAHFRLQQAYGDTLMIVTTAALDREK
MPEYNLTVVAEDLGSPPFKTFTQYTIRVSDENDNVPSFSKAVFEVSVMENKAPGSYVASL
VARDPDEGDNGKVTYTLLENEIEGVPVSSFISIDSDSGTLYTMRPLDHEYVKQIEVAIQA
TDGGSPPLSSTALVKVRVVDENDNTPFFVHPMLVNGSADIXLPCNAPAGYMALKLEGLDN
DDAMNAELSYSILEDEALLFVVNQNTGEMALKHDLALVFGDTLHVKVAVSDRGRTPLSHT
ASIHFVVSEAMPLEEQVVVVLEASQKQTTPDFDVSFIIIGLLVAACAVLLVAIVAVALSR
WNCHRDVNSISKISGGNFRKTQLPTHSIDSSDSSSLSGGSVTVTEQISSSRDESSFTYED
EQSRDSDSKIFRPLLNKGHFEPVALWQGERYTLQMSEIGSVDQSSIKDSGKGDSDSNDSD
SDSGKAIRKIAPVAHQQASGSLYTGPMDRARVCRPREIPTHTTSTHVGNSGYTVAYRTLG
HGHHPAATNQGPPFRDYICNTVFNQTKPLSFTGWGHNPPITISIISRDS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaaaattttctcctgggttttagtttagttctgatccattccgcatggacg
gtaagaggcacaacaacgaagtattacacgtacgaagaagacgcaccaggaaccttcatt
ggaaacctttcaacggatctgaagctcgacctgtctgaagatccgcacaccagattcagg
ttcatgcaggaggcgaacgcatcactaatccgcctgcgccaaagcgacgggctgctcacg
gtgggagagcgcatagaccgcgagaacctgtgcggctcctccgcgcaatgcgtgctcacg
gcggacgtggtggttttctccaaggaaaaattccatttgatccacgtcgagatccacgtg
agggacattaacgatcacgcgccggtgttcccacgcggagagaccaggctcgagatttcc
gagaacacggacgtggacgcgcgttttcccatcgaagtcgccgccgacctggacgtagga
aacaattacatccaaacctatcagttgattaacagcagtcatttcggcattgaggtggga
accggtgaagatggcaagaagtttgctcagctcgtgcttgcgcagaagcttgatcgtgag
cttgaagatatctacacacttcaagtggttgcgagcgacggtggaagtccacccaagtct
ggatcaataactgtgcgcgtaaaagttttggactcgaacgacaacagtccgcagttcgag
cacgacacgatcagagtcgagctgcacgaggacgcgcctgtcggtttcctgctgctccgg
gttcaagccttggaccctgatcacggtgaaaacggggacgtgcgctacgatctcgcggac
ggcgaatccaacgagatcacaagcacattcgaggttgatccctattccggagcgttgagc
ttgaggtcctcggtcgactacgagacgaagaaaacttacgagctgcgcatcagggcatac
gatctgggttccgactcggtgccttcgacctgcacggtcacggtggagatcgtagacgtg
aacgacaacgcgccagaggtcacgatcaagccgatggccccgaggagcgcggatgtggcg
tacatcacggaagcggctgcggtggacagtttcgtcgcgctcgtgagcgccacggatcga
gactcgggcgcaaacgggtacgtgcgcgtcggcctgcacgggcacgcgcacttccgactc
cagcaggcgtacggagacacgctcatgatcgtcaccacggctgcgctggaccgcgagaag
atgcccgagtacaacctcaccgtcgtagcagaagatctcggctcgccgccgttcaaaacc
ttcacccagtacacgatccgagtgagtgatgagaatgacaatgttccgtccttcagcaag
gccgtcttcgaagtttcagtgatggagaacaaagcaccaggatcctacgtggcttctctg
gtagctcgagaccctgatgaaggagacaacggcaaggtgacttatacgcttctcgagaac
gagattgaaggtgttcctgtgagttctttcatctcaatagactcagattctgggactctg
tacacaatgaggcctctggaccatgagtatgtcaagcagatcgaagtggccatccaagca
acagatggtggttcccctccactctccagcacagcgctggtcaaggtcagggttgtggat
gagaacgacaacacacccttctttgttcaccccatgctggtcaatggttcagcagacata
nctttaccatgcaacgctcctgctggttacatggctctgaaactagaaggacttgataat
gatgatgcaatgaacgctgagctctcctacagcattttggaggacgaggctctcctgttt
gttgtgaatcaaaatacaggtgagatggcactaaagcatgacctggcactggtatttgga
gacacactgcatgtcaaagtggcagtaagcgaccgtggcagaacacctctttcccacaca
gcctcaatccactttgtggtttcggaagccatgccgttagaagagcaagtggtggtagtt
cttgaggcgagtcaaaaacagaccacgcctgattttgatgtttccttcataatcatcggg
cttctggttgccgcatgtgccgtattgctggtcgccatcgtggctgtcgctctctcacgc
tggaactgccacagggatgtcaactcgatcagcaaaatatctggggggaacttcagaaaa
actcaattaccaacacacagcattgactcctcggattccagcagcctctccggaggtagt
gtaacagtcaccgaacaaatctcctcttcaagggatgaatcatctttcacttatgaagat
gaacaaagcagagattctgacagtaagattttccgacctcttctcaataaagggcatttt
gagccggttgccctttggcaaggggaacgatatacacttcagatgagtgaaatcggatct
gttgatcagtcgagcattaaggacagtgggaaaggagacagtgactcgaatgacagcgac
tctgatagtggaaaagccattaggaaaattgctcccgttgcacatcagcaagctagcggt
tccttgtacactggaccaatggatagagccagagtatgcagacctagagagattccaaca
cacactacaagcacccatgtgggcaacagtgggtacactgtagcatatcggactctggga
cacggccaccatccagctgccaccaatcaaggaccacccttcagagactacatttgtaat
acagtctttaatcaaacaaagcccctgtctttcacaggatggggacacaaccctcctatt
actatcagcatcatatcccgagacagttaa
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