Silurus meridionalis (southern catfish): 124378647
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Entry
124378647 CDS
T08004
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00310
Lysine degradation
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124378647 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124378647 (setdb2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
124378647 (setdb2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124378647 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
124378647 (setdb2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
124378647
NCBI-ProteinID:
XP_046694351
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All DBs
Position
24:complement(14836219..14847120)
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AA seq
606 aa
AA seq
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MNIILESEISLNSAWRNDSFEEVLIGEDILTVSVSDSHCTIVKMKEPPVPEDTSHDDASR
NPEPGSDISQTSPSGRNDATLSGKLDTYDYMTLLSPTYLISDDQLAPVSPVQFSYQQHEC
CPDCMSHLPSHSDHFLGHNPLRVPLLCRFQRHCAKPLAFSAQEELDTDVLYKAPCGRGLR
CMDEVYQFLRQTKSLGVLQQTNFSFNPQVLPERQAQPRPLAPASPSPTTSIFERDISRGM
EAVPVTLCNDLDGVRPKEFRYRKNRWPHGCFLSKAPFFRTCCDCKDGCTNPSSCVCLQLS
LKAGAKADQLYSHLRLNQPVASGLYECGPWCSCKKSSCQNRVVQHGLRARLQVFRTNDKG
WGVRCRDDLDEGTFVCTYAGVVLRLGRNSEEPLLCKISKEDQLSDDEVEVVEEWTLSSGQ
KKTIAETLDTSPPLYVPVIQRPADQLSTQLDGQREQLEHTDNQDKSNDCSSPNSNHTEIK
NYRCEEVARKRLRLDDKGNGGGVRRDQTVPRAEGKPGCQEKIYYLDASKEGNVARFINHS
CNPNLFVQNVFVDTHDPKFPVIAFFTCRSIRAGTELTWNYSYKSGSDPEHEVPCLCGSND
CQAVII
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattctagagtcggagatctcactcaattcagcatggaggaatgattctttt
gaagaggtgctgatcggagaagacatcctgaccgtgtcagtatcagactcgcattgcact
atcgtgaaaatgaaggaaccgcctgtgccggaagacacctcacatgacgacgcatcaagg
aaccctgagcccggttcagatatcagtcaaacgtctccctcaggcagaaacgatgctacg
ttatcagggaagttagacacgtacgactatatgaccctgctgtcgccaacatatctcata
tcagatgaccagctggcccccgtatcacccgtccagttttcttatcaacagcatgaatgc
tgcccagactgtatgtctcacctcccgtctcactcggaccactttctcggccacaacccc
ttgcgagtgcctcttctttgccgtttccagcggcattgcgccaagccactcgcgttttca
gcgcaagaggaattggacaccgacgtgctctataaagctccctgtgggcggggcctgcgc
tgcatggatgaagtgtatcaatttttacgccagaccaaaagcctcggggtcctgcagcag
accaacttcagcttcaatccacaggttctaccagaacgccaggcccagccaagaccgctt
gctcctgcttcaccttctcctacaaccagtatttttgaaagagacataagtcgggggatg
gaagccgtcccggttactctgtgtaacgacttggatggcgtgcgaccaaaagagtttcgc
taccgtaagaatcgctggccacacggctgcttcctaagcaaggcgccgtttttccggacg
tgttgcgactgcaaagatggatgcacgaatccttccagctgtgtgtgtcttcagctgtct
ctaaaggccggggcaaaggcagaccagctttatagtcacctccggttaaatcaacccgtg
gcctctgggctgtatgaatgtggtccgtggtgtagttgcaagaaaagcagttgtcagaat
cgtgtggtccagcacggactccgtgctcgcctgcaggtgtttcgcaccaacgacaaggga
tggggtgtgcgttgccgtgatgacctcgacgagggcacctttgtctgcacttacgcaggt
gttgttctccgacttgggaggaactcggaggagccccttctctgtaaaatctcgaaggag
gatcagctttcggacgacgaggtggaggtggtggaggagtggacactttcctcagggcag
aagaaaacgatcgctgagacactggatacctcgccaccactttacgttcctgtgatccag
aggcctgcagaccagctctctacacagctggatgggcagagggaacagctggagcacacg
gataaccaggacaaatcgaacgactgttcatcacctaattccaatcatacagaaataaaa
aactatcgttgcgaagaggtggcgaggaaaaggctccggttggacgacaaaggaaacggc
ggcggcgtacgccgagatcagacggtgccgagagcagaaggaaaacccggctgtcaggaa
aaaatctattacctcgacgcttcgaaagaaggaaacgtggcacggtttattaaccacagc
tgtaatccaaacctcttcgtccagaacgtctttgtggacacccatgatcccaaattccca
gtgattgctttctttacatgcaggtcgatcagggcaggaaccgagctgacctggaattat
tcctataaatctggaagtgatcctgagcatgaggtaccatgtctgtgtggttcaaatgac
tgccaagcagttatcatctga
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