Silurus meridionalis (southern catfish): 124378906
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Entry
124378906 CDS
T08004
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378906 (lrsam1)
04121 Ubiquitin system [BR:
smeo04121
]
124378906 (lrsam1)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124378906 (lrsam1)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
124378906 (lrsam1)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124378906 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
zf-C3HC4_3
LRR_4
LRR_1
SAM_1
Prok-RING_4
SAM_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
124378906
NCBI-ProteinID:
XP_046694696
LinkDB
All DBs
Position
25:9314034..9332374
Genome browser
AA seq
724 aa
AA seq
DB search
MPLFYKKKKPSVESRKRLEYQLCLSKEAGADDILDISNCELAEVPTSVFSICKVLQKKVL
ILCGNELKTLMPKNCAISTLATIKVLDLHENKLTSLPDDIGQLPFLQVLNAENNQIKALP
TSIGDLRNLQTLNMKGNCLRELPSSVGCMSSLRTLDLSENSIRELPKELANVRTLESLSL
DACVMNYPPASVCTSGTEEIQRFLCSELGLEYCPPSQYLLPVLENDSSKPSPDCVDGEDL
VWQCKFMDYEKRKEQKQMEKLNFEKELEEKQREQTQLLLLNNSRKEGMLLSVKLEQERVE
QGVNQQQRFQEAERQKLLEKVRQAEAGISTRISNLLLDNKRQAKSAEFLQVLEEDRIRME
QLTAITQEEASSLRKKDVAVAMQTMLSEGYSLRLLQEASENRRQNMVSEACRSMDTLDRK
FEQVLALQQLDKSKAISQILQEEEMQKAAFEALQLQRDSVHGYIRNQIMLIEAELMQLTK
LEVKRRNLDAETLQESLAAQRTALSDMLQQLLKQKDQREMELKQVLMELELKSDSTQQNY
WMIQYQRLLDAKPLSLRMQEAGVDKELVKLLCKLSAQHYLPVIAHHRITAEALCYMTTKD
LSKLGISEVGIQKALLNWAREQPCSPKSSPTFQEEQEPGPSIPLTPPQQQLTPPLTPSTP
ITPTAPSPMDTPGTNECVVCMEDRSLVVFLPCGHICCCQVCSDALQSCPLCRSCISQRIR
LYHG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttctacaagaagaagaaaccaagtgtggagtccaggaaacgcctggagtat
cagttgtgcctgtctaaagaagccggagcagatgacatcctggacatttcaaactgtgag
cttgcagaggtgccaaccagtgtcttctccatctgcaaagtgctccagaagaaggtgctc
atcctctgtggaaatgagctcaagacactgatgcctaaaaactgtgccataagcactcta
gcaactataaaggttttggacctgcatgagaacaagctcacttcactcccagatgacatt
ggacagcttccatttctccaggtgttgaatgcagaaaacaaccagatcaaggcacttcca
acctctataggggatcttcggaatctacaaacgctgaatatgaaagggaactgcctccgt
gaactgccctcatctgtgggatgcatgagcagtctgcgcaccctggacctgagtgagaac
agcatcagagaactgcccaaagagttggccaacgttcgaaccctggagagcttgtctctt
gatgcatgtgttatgaattacccacctgcctcagtctgcacatcaggcacagaagaaatc
cagcgctttctctgctcagaactggggttggaatactgtcctccttcacagtacctgctg
cctgtgttggaaaatgatagcagcaagccgagtccagactgtgtggatggagaagactta
gtctggcagtgcaaatttatggactatgagaaaagaaaggaacagaagcaaatggagaag
ctgaactttgagaaggagctggaagagaaacagagagagcaaacacagctccttcttctt
aacaactcccgcaaagaggggatgctgctgtctgtcaaactggagcaggagcgtgtagag
cagggagtcaaccagcagcaaaggttccaggaagctgagagacagaagctattggagaaa
gtccggcaggctgaagccggcatctccacccgtatctccaatctgctgctggacaacaaa
cgtcaagcaaaaagtgctgaatttctgcaggtgttagaggaagatcgaattcgaatggag
caacttactgccatcacacaggaggaagccagttctctgagaaagaaagatgttgcagtt
gctatgcagaccatgttatcagagggctactcactgagattactgcaggaagccagtgag
aacaggagacaaaatatggtgtctgaagcctgcaggagtatggatactttggacaggaag
tttgagcaggtcttggctctacagcagcttgataaaagcaaagccatcagccagatcctt
caggaggaagagatgcagaaggcagcttttgaggccttgcagctccaaagggacagtgta
catggctatattcgtaaccagattatgctaattgaggcagagttaatgcagctgacaaag
ctggaggttaaaaggaggaatctggatgcagaaaccttgcaggagtcactggcagcgcag
aggacggctctgtcagatatgcttcagcagctgctgaaacaaaaggaccagagagagatg
gaactcaaacaggttttgatggaattggagttgaagagtgattccacacagcaaaactac
tggatgatccaatatcaaagactgctggatgccaagccactgtctctgcgcatgcaggaa
gctggtgtagataaggagctggtgaagttgctgtgtaagctttcggctcagcattacctg
ccagtcatagctcatcatcgaatcacagcagaggctctgtgttacatgaccaccaaagac
ctcagcaagttggggatcagtgaagtaggaatacagaaagctctcctaaactgggccaga
gaacaaccatgttctcctaagagttcccctacgttccaagaggaacaagaacctggtcca
tccattcccctcacaccgccgcaacagcagctgaccccacctctgacccccagcaccccg
attacccctacagccccaagccctatggacacaccaggcacaaacgagtgtgtggtgtgt
atggaggataggtccctggtggtcttcttgccatgtggtcatatatgctgctgccaggtc
tgcagtgatgctctgcagtcatgcccactgtgccgcagttgcatctctcagcggatccgc
ctttaccatggctaa
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