Silurus meridionalis (southern catfish): 124380195
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Entry
124380195 CDS
T08004
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
smeo
Silurus meridionalis (southern catfish)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
124380195
NCBI-ProteinID:
XP_046697003
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Position
26:18074011..18085029
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AA seq
580 aa
AA seq
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MSSALGKDKDCKEKEAKALSGKERDKEHKGPTGLGKDGKEPKTKGKDAKDGKKDSSGAPP
AVAFSVDNTIKRPNPSTGMRKKSSNAEVAKELAKCRDENSTRLDLSKRSIHLLPSTIKEL
TLLTELYLYSNKLQSLPAELGCLSGLATLALSENSLTSLPDSLDNLKRLRMLDLRHNKLR
EIPAVVYRLTSLTTLYLRFNRITAVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLIT
LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRS
LSKCRELEELNLENNNISLLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM
EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDIC
GLASLEVLILSNNLLKKLPHGIGNLRKIRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ
LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSK
LSIMSIENCPLSQLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgctttaggcaaagacaaagactgcaaagagaaggaggccaaagcgctctcg
ggtaaagagcgcgacaaggagcacaaggggcccaccggcctcgggaaggacggcaaggag
cccaaaaccaaagggaaagacgccaaagatgggaagaaagactcgagcggggcgccaccg
gccgtcgctttctccgtggacaacacgattaagcggccgaacccctcgaccgggatgcgc
aagaagtccagcaacgccgaggtggccaaggagctcgctaagtgccgagacgagaactcg
acccgcctggacctgtctaagcgctccatccacctgctcccctccaccatcaaggagctg
acgctgctcaccgagctctacctgtacagcaacaagctgcagagcctcccggccgagctg
ggctgcctgtcgggcctggcgacgctggcgctgagtgagaactcgctcaccagtctgccc
gactcgctcgacaacctcaagcggctgcgcatgctcgacctgcggcacaacaagctgcgc
gagatcccggccgtggtctaccgcctcacgtccctcaccacgctgtacctgcgcttcaat
cgcatcaccgccgtcgagaaggacatccgcaacctcagcaagctcaccatgctgagcatc
cgcgagaacaagatcaaacagctgcctgctgagatcggagagctgtgtaacctgatcact
ctggacgtggctcacaaccagctggagcaccttcctaaagagatcgggaactgcacgcag
atcaccaacctggacctacagcacaacgagctcctggaccttcccgagactatcggcaat
ctgtcgagtataaaccgtctggggctgcgctacaacaggttgtctgccatccccagatct
ttatccaagtgtcgggagctggaggagttaaacctcgagaacaacaacatctccctgctg
cctgagggtcttctctcgagcctggtgaacctgacgagtctgacgctggcgcgcaactgt
ttccagtcgtacccggtgggcggcccgtcgcagttctccaccatctactcgctcaacatg
gagcacaaccgcatcaacaagatcccgttcggcatcttctcacgagccaaagtcctcagc
aagctcaacatgaaggacaaccagttgacgtcgctgccgctggacttcggcacatggacc
agcatggtggagctgaatctcgccaccaaccagctgaccaagatccctgaggacatctgc
ggcctggcttccctcgaggtcctcatattatccaacaacctactgaagaagttacctcac
ggcatcgggaacctgcggaagatacgggagctggacctggaggagaacaagctggagtcg
ctcccgaacgagatcgcctacctgaaagacctgcagaaactcgtcttgaccaacaatcag
ctgaccacgttgccgagagggatcggtcacctgaccaacctgactcacttgggactggga
gagaacctcctgcagcacctgcctgaggagatcggaactctggagaacctggaggagttg
tacctgaacgacaaccccaaccttcacggtctgcccttcgagctggcgctgtgcagcaag
ctgtccatcatgagcatcgagaactgccctctgagccagctcccgccacagatcgtcgcc
ggaggcccgtccttcatcatccagttcctcaagatgcagggcccgtaccgcgccatggtc
tga
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