KEGG   Silurus meridionalis (southern catfish): 124382240
Entry
124382240         CDS       T08004                                 
Symbol
sdha
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo00020  Citrate cycle (TCA cycle)
smeo00190  Oxidative phosphorylation
smeo01100  Metabolic pathways
smeo01200  Carbon metabolism
Module
smeo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
smeo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smeo_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    124382240 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    124382240 (sdha)
Enzymes [BR:smeo01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     124382240 (sdha)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA DAO FAD_binding_3 HI0933_like
Other DBs
NCBI-GeneID: 124382240
NCBI-ProteinID: XP_046700387
LinkDB
Position
29:complement(5256960..5271780)
AA seq 662 aa
MAALLATSRVLGKKVLLSNSLPAGCPASLRKLHFSIYGKRGGAKLSDAISTHYPVVDHEF
DAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMEEDDWRWH
FYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEDGKVYQRAFGGQSLKFGK
GGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMDEGKCVGVIALCMEDG
SIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYG
AGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPEKD
HVYLQLHHLPPLQLASRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVI
THKDGEDKVVPGLYACGESGCASVHGANRLGANSLLDLVVFGRACALTIAENNTPGEKLE
PLKPNAGEESVANLDKIRFADGSTRTSEIRLNMQKTMQSHAAVFRNGDVLKEGCIKMDAV
YQTLDDVKTFDRGIVWNTDLVETLELQNLLLNAVQTINAAEARKESRGAHAREDFKTRVD
EYDYSKPLQGQQKKPFEEHWRKHTLSYADLKTGKVTLEYRPVIDDSLNAEDCAAIPPAIR
SY
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcggcgctcttggcaacttcccgtgtcctcggaaaaaaggttttattatcaaactcg
ttgcccgccggttgcccagctagcctccggaagcttcatttctccatttatggcaaaaga
ggtggagcgaagctctcagacgctatatctacacattatccggtggtagatcatgagttt
gatgctgttgtggtgggagcaggtggcgctggacttcgggctgcttttgggttgtctgaa
gccggtttcaatacagcatgcattaccaaactgttccctacgcgctctcacacagtggct
gcacagggcgggatcaacgcagcacttggtaacatggaggaagatgattggcgctggcac
ttttacgacacagtaaaaggatccgattggttgggggaccaggatgccattcactacatg
actgaacaggctcctgctgctgtagtggagttggaaaactttggtatgccatttagccgt
acagaggatggaaaagtctaccagcgtgcgtttggaggtcagagtttgaagtttggtaaa
ggcggccaagcccacaggtgctgctgcgtggctgacaggacgggtcactctcttctacac
acgctctatggacggtctctgaggtatgacacaagctattttgtggagtattttgccctg
gacctactgatggacgaagggaaatgcgtaggagtcatcgccttgtgcatggaagacggt
tctattcaccgcttcagggccaaaaacacagtaattgccacaggtgggtacggacgcact
tatttcagctgcacatcagctcacaccagtacaggagatggtactgccatggtgacgcgt
gccggcctgccatgccaggacctggagttcgttcagtttcaccccacaggcatctacgga
gctggctgtctgatcacagagggatgtcgaggtgaaggtggaatcctgattaacagcgag
ggtgagaggtttatggaacgctatgctcccaacgctaaagatctggcctccagggatgtg
gtttcacgctccatgactatcgaaatccgtgaaggaagaggtgttggcccagagaaagac
cacgtgtacctccagctccaccatctcccacctctgcagctggcttcccgtctgccagga
atctctgaaactgccatgatattcgccggagtggacgtcaccaaagaaccaattcctgtc
ctacccacggttcactacaacatgggaggcatccccaccaactacaagggacaggtcatc
actcataaggatggtgaggataaagtagtgcctgggttgtatgcctgcggtgaatctggc
tgtgcctctgtacacggtgccaaccgcctgggtgccaactcgctgctggatctcgtggtg
tttggccgtgcttgtgctcttaccattgctgaaaacaacacaccaggagagaagcttgaa
cccctgaagcctaatgcaggagaggaatccgttgctaacctggataaaatccgcttcgct
gatggctctacaagaacttctgagatcaggctcaacatgcagaagaccatgcagtctcat
gcagcagtgtttcgtaatggggacgtcttgaaggaaggctgcattaagatggacgccgtg
tatcagacattagacgacgtgaagacgtttgacagaggtattgtttggaacaccgatctc
gtggagactctggagttgcagaacctgttgctgaatgctgtgcagacgatcaacgcagct
gaggctcgcaaagaaagcaggggggctcatgcccgcgaagatttcaaaactcgtgtggat
gaatatgactactcaaagccactgcagggtcagcaaaagaagccttttgaagagcattgg
aggaaacacacactttcatacgcagatctcaagacaggaaaggtcactctggaatacaga
cctgtgatcgatgactctctgaatgccgaagactgcgccgccattccacctgcgattcgc
tcctattaa

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