Silurus meridionalis (southern catfish): 124386094
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Entry
124386094 CDS
T08004
Name
(RefSeq) zinc finger C3H1 domain-containing protein isoform X1
Organism
smeo
Silurus meridionalis (southern catfish)
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Gene cluster
GFIT
Motif
Pfam:
zf-C3H1
TPR_19
Motif
Other DBs
NCBI-GeneID:
124386094
NCBI-ProteinID:
XP_046705679
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Position
5:28643689..28659796
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AA seq
1963 aa
AA seq
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MDPRLSCGSPREDGELEDGEICDDEAEEKQQRPPQGARPGAASRKPKTSTPRSKPTGMGP
GKDFRSPPPLFRQGPMIHGNFPVCSSGPDRLEPSSPRTSFWERSHRALGRLRYRGRPGEN
RGENRGDRARGAARGRNIHRRDSFNWKQKPVGRAAPRKPPYISSKPENGMDESFEDLLMK
YKQIQLELECIRNQERRALKPSVDSPHREQEDTTTAETLPGLAEGAESDLPEIREELEER
KAFQAFNLRPLRQKLLTPAERDALNTKTTQGAEQKDGEHNEENNEEVKMEVEKSPVEPTT
QNDAEEEEEEEEEDSSDLSISLSKETNRTRGKDEDDELSELQLRLLALQSASQRWQQKEQ
QVMKESKEKLNRAKTTPEHYRVTTRSASAGRGRPGSGLKGQEKGKPPGRLGTERGKTAPK
GHPAKHTLSPVSKQAWRKQQLRTWKLQQEAQKQKSEEDEEKKKREEEIRKIRDLSNQEEQ
YNRFMKLVGGKHHTHIKFIDPEHRKLLLKQGLDFVGNLYQYDNYDEVAMDTDSETNSPAA
SPAHEPFVSVGSLYTVPASVFSLGSAPLRQGLSQYCVDPVGVVSLTPPPPPPPMPPPEES
ERPPKPPFADEEEEEEMMLREELLKSLANKRAVRAEDTSSNSGPPSPIRPVAPPTIRALP
TASSASLGFSTGSVLSRNSSKFARGAGASRVPLVLPRHKAVVVRLNASDDSDSELEASSS
AQCVFGGLESMIKEARRTVEAARPRPVPVAEKENNPLRIPDTLPEGTVMEYRLLRAELTS
RENQRVRNSDSAASSPVGFDLDVDVLGKASELGDMEEKLARHHAQLQKDQTLLNQLHQQE
LRKKESLKLAEAKVVRLKEQLLAAEKVASANRVLLRKLQEQVQRVQHRVAVKQHQAMRME
RELLCNTGAVSGNYKRNNTQLSVGKRARVDVSDSHYADLMAQKRRLQQLESEYALKIQKL
KEAQALRQASAPIMPCSVTQPSLHDLTQDKLTLTSDDPGDDPDTEGAEPQPADGNTSTRR
RSFRESGSFTKPNLSHGETPATPTTPTTPTTSSKQATPPAELLLFGLKVEDLRLRYQQCE
MLPDLLRQELRLQGGALLNIHPSDRIIQVDFDPMAPQQVRSELKPVPFGPYRSPLLVFRS
YRFSPYFRTKEKLSLSSITYSHAIEPRKCFCRFDLTGTCNDDDCQWQHMRNCSLNGNQLF
QDILSYSLPLIGCSDQSSTNDINCSTEKYIKKLFGANKDRMGSDQKAVLLVSKVNESLRH
VPPFTTYKQRRKWRPEPHRTTPDPNTAAESEEENITIPSAAEEDVSVSECRLVSDVCVTQ
DDKRYFDSETDDISNLEYSVLDSPRDRQLWIKLAYRYLNQKDTSVVSECVDAALNTLSRA
LEDNREDEELWCHYLTLFSCRGSTDDVREMCDMAVEHAAHYTVWWTYLSIESSFDGKDAV
CKRMLQFLVDAAGSAVEELSSFHLLETLLYRAQLSVFTGRVHNARHILQGALMIEGECRV
SGHLTLSHLCLAWLSYIHLCEFGMLPAHLYDPANSNPSHIVSLETFLFPWRTSEDIKTPP
ERLITLFQDAISSCVDEGVSPAERTLACLPLHLNLLHLYRVLGRLKEAIALCESMLDVVP
HCCPLLEALSEIHAAGGDADEAASVWLCAHRLRPHDARVFYSLCKCLHTQEKHDEMDTLF
KQFVCFLVNGVEDLSPAVVLRHLLGVTSEDLRLPVPSLPEQLQDQLPYLHLIHSFWQSVR
GTVVEAVEAFEAALGAISDLEVVKKLWLDYLLFTSSKLAGRDLRVFSDLVQRCLNTTPCR
ISLPHHSATYWTCYSFHNQVISFYLSFLPPSLHSSALERFRHTMPNNSELCLRVLQQEWS
DENVEHLKLQTRLMTAAVPTCLSAWRIAVAVQTQQKCRVEVQKLYQQALQKLPLCAALWR
DWLLFEAAAGGKTDTLNKLVVKCQDVGVSLSEPLSVNSHTQDS
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaggcttagctgcggctctccgcgggaggacggcgagctggaggacggggaa
atctgcgatgacgaggcggaggagaagcagcagcggccgccgcagggcgcgaggcctgga
gccgcgtcacggaaacccaaaacctccacaccgcgatccaaacccaccggtatgggaccg
gggaaggacttccgctctccaccgccgctcttcagacaagggcccatgatacacggcaac
ttccccgtgtgttccagcgggccggaccggttagagccgtccagtccacgaaccagcttc
tgggagcgcagtcacagggcactgggccgcctccggtaccgggggagacccggggagaac
cgcggggagaaccgcggggacagagcgcgaggggccgcgaggggaagaaatatacaccgg
agggattcattcaactggaaacagaaaccagtcggccgtgcggcgcctcgcaaaccgccg
tacatctcctccaaaccggagaacggcatggacgagagcttcgaggatctcctcatgaag
tacaaacagatccagctggaactcgagtgcatccgcaaccaggagaggagagcgctgaaa
cccagcgtagactcgccgcacagggagcaggaggacacgaccactgccgagacgctgccg
gggctggcggaaggggcggagtcagacctcccggagatcagggaggagctggaggagagg
aaggcgttccaggcgtttaacctccgacctctcagacagaaactactgacacctgcagag
agagacgcactcaacacgaagaccacccagggggcggagcaaaaggatggggagcataac
gaggagaacaatgaggaggtgaagatggaggtggagaaaagtcctgtcgaaccgacaact
cagaacgatgctgaagaagaggaggaggaggaggaggaagattcatcagacctgagcatc
tcactaagcaaagagacaaacagaactcgtggcaaggatgaagatgatgagctctcggag
ctgcagctgcgtctcctcgctctacagtcggccagtcagaggtggcagcagaaggagcag
caggtgatgaaggagagcaaagagaaactgaatcgtgccaaaaccacgcccgagcactac
cgggtcaccaccaggtcagcctctgccggcaggggtcgcccagggtcagggctcaaaggt
caagagaagggcaaacctccaggtagactgggcacagagcggggcaaaacagcacctaaa
ggacatccagctaaacacaccttgagcccagtgtcgaagcaggcatggagaaagcagcag
ctgcgtacgtggaagctgcagcaggaggcacagaagcagaagagcgaggaagacgaggag
aagaagaagagagaggaggaaatacgcaagatcagagacttatccaatcaggaggagcag
tacaaccgctttatgaaacttgtgggagggaaacaccatacacacatcaaatttatagac
cctgaacacaggaagttgttgttgaagcagggactcgactttgtgggtaatctgtaccag
tatgacaattatgatgaggttgccatggatacagacagtgagacaaactctccagctgcg
tctccagcgcatgagccgtttgttagtgttgggtctctgtacacggttccagcgtctgtg
ttctctttaggctccgcccctctccgacagggcctttctcagtattgtgtggacccagtg
ggtgtggtttcactgaccccgcctcctccaccccccccaatgcctcctccagaggaatcg
gagcgtccacccaaacctccttttgctgatgaagaagaagaagaggagatgatgctgagg
gaggagcttctgaaatcgctagctaacaaacgtgccgtgagagcagaggacacatccagc
aacagtggtcctccctctcccatcagacctgtagctccacccaccatcagagccctgccc
actgcatcttctgcctctctcgggttcagcactggctccgtcctctctcgtaattccagc
aagtttgcccggggagccggggcatccagagtgccactggtgctgccgcgacacaaagcc
gtggtggttcgtctgaacgcgtctgatgacagcgactctgagttggaggcctcgagctcg
gcgcagtgtgtgttcggggggctggagtccatgattaaagaggctcggagaactgtagag
gcggcgagaccgaggcccgttcctgtggctgagaaggagaacaacccactgaggattcct
gacactttacctgagggaactgtaatggagtaccgcctcctgagggcggagctaaccagt
cgggagaatcagcgtgtcaggaattctgattctgctgcttcctctcctgtcggatttgac
ttggatgtggatgttctgggaaaagcatctgaacttggagacatggaggagaaactcgcc
agacaccatgctcagctgcagaaggaccagactctgctcaatcagctccatcagcaggag
ctcaggaagaaagagtctctgaaactggctgaggctaaagtggtgagactgaaggagcag
ctgcttgcggctgagaaggtggccagcgcaaaccgggtgctgctgagaaaactgcaggaa
caggtccagcgtgtgcagcatcgtgtggcagtaaaacagcaccaggccatgcggatggag
agagagctgctgtgtaacacaggagcagtgagtgggaactacaaacgcaacaacacacaa
ctctctgtagggaaacgtgcgcgtgtggacgtgtccgactctcactacgctgatctgatg
gctcagaagaggcgtctacagcagctggagagcgagtacgccctgaagatccagaagctg
aaggaagctcaggcgttgcgtcaggcgagcgctcccatcatgccctgcagcgtcacacag
ccctcgctccacgacctcacgcaggacaaactcacgctcaccagcgacgaccccggtgac
gaccctgacaccgagggggcggagcctcagccggccgacggcaacacctccacgcgccgc
cgctctttccgcgagtccggctcctttactaaacccaacctgagccacggcgagactccg
gccacacccaccacaccgaccacgcccaccacatcctccaaacaagccacgccccctgca
gagctgctcctgttcggcctgaaagtggaggacctgcggctgcgctatcagcagtgtgag
atgctcccagatctcctgagacaggaactgcgtttacaagggggcgctctgctgaacatc
catcccagtgacaggataattcaggtggactttgaccccatggcccctcagcaggtccgg
agcgagctgaaaccggttcccttcggtccataccgcagtcctctcttggtgttcagatcg
tacaggttcagtccgtatttccgcactaaagagaagctttctctgagctccatcacctac
agtcacgccatcgagccgcgcaaatgcttctgtcgcttcgacctgacgggaacctgcaac
gacgacgactgccagtggcagcacatgagaaactgctctctgaatggaaaccagttgttc
caggacatcctgtcctacagccttcctctgattggctgctcagaccagagttccaccaat
gacatcaattgctctacagagaagtacatcaagaagctgtttggagcaaataaagaccgg
atgggttcggaccagaaagcagtactgctagtcagtaaagtcaacgagagcttacggcac
gtgccaccgtttaccacttacaaacagaggaggaaatggagaccggaaccacacagaacc
acaccagacccaaacactgcagctgagagtgaggaggagaacatcaccataccttctgct
gctgaggaggatgtgagtgtgtctgagtgcaggttagtgtcggatgtgtgtgtgactcag
gatgataagcgatactttgacagtgagacggacgacatttcgaatctggagtacagtgtg
ttggacagcccgagagacagacagctgtggatcaaactcgcctacagatacctcaaccag
aaggataccagcgtggtgtctgagtgtgtggacgctgcactaaacacactctcgcgtgct
ctggaggataatcgtgaggatgaggagttgtggtgtcactacctcacactgttctcatgc
cgaggcagcactgacgatgtccgggagatgtgtgatatggctgtggagcacgcagcacac
tacactgtgtggtggacttacctgagcatcgagagctcttttgatggaaaggatgccgtg
tgtaaacggatgctgcagttcctggtggatgctgcagggagtgctgtggaggagctctca
tcctttcacctgctggagacgctgctgtaccgagctcagcttagtgtgtttacagggcga
gtgcacaacgcccgacacatcctgcagggtgcgctcatgattgagggagagtgtcgcgtg
tcaggacatctcactctgtctcacctctgtctcgcgtggctctcctacattcacctgtgt
gagtttgggatgcttccggcgcacctgtacgacccggctaactccaacccgtcccacatc
gtcagcctggagaccttcctgtttccctggaggacgagcgaagatataaaaactcctcct
gaacgtctcatcacgctgttccaggatgcgatatcgagttgtgtagatgagggtgtgtct
ccagctgaacgcactcttgcatgtttgcctttgcacctcaacctgctccacctgtacaga
gttctgggaaggctgaaggaagccatcgcactgtgtgagagcatgctggatgtggtccct
cactgctgtcccctgctggaggctctaagtgagattcatgctgcaggtggagatgcagat
gaggcagcgagtgtgtggttgtgtgcacacaggctccgcccacacgacgcccgagtgttt
tacagtctgtgtaaatgtctacacacacaggagaaacacgatgagatggacacactcttc
aagcagtttgtgtgtttcctggttaatggtgttgaagatctctctcctgcagtggtgtta
cgacacctgttgggtgtcacatctgaggacctgcgtctccccgtcccgtctctccctgag
cagctccaggaccagctcccttacctgcacctcatacacagtttctggcagtcggtgcga
ggcactgtggttgaggcagtggaggcttttgaggcagcacttggggcaatttcagatctg
gaggtggtgaagaagctctggcttgattatctcctctttactagcagtaagctggcaggc
cgagatctgcgagtgttcagtgatttggtgcagcgctgtctgaacaccacaccctgcagg
atcagcctcccacaccacagcgccacctactggacctgctacagcttccacaaccaggtg
atctccttctatctgagttttcttcctccatcacttcactcatctgctttggagagattc
agacacactatgcccaacaactctgaactctgcctcagggttctgcagcaggagtggagt
gatgagaatgtggaacacctgaagctacagacacgtctgatgactgcagcagtccccacc
tgtctgtctgcctggaggatagcggttgctgtacagacgcagcagaagtgcagagttgaa
gtgcagaagctctatcagcaggctctccagaagttgccgctgtgtgctgctctgtggaga
gattggctcctgtttgaagctgcagctggaggtaaaactgacacactgaacaaactggta
gtgaaatgccaggatgtgggagtgagtctgagtgagccgctcagtgtaaactctcacact
caggactcctga
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