KEGG   Silurus meridionalis (southern catfish): 124386324
Entry
124386324         CDS       T08004                                 
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
  KO
K16499  protocadherin delta 2
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:smeo04515]
    124386324 (pcdh10b)
Cell adhesion molecules [BR:smeo04515]
 Cadherins
  Protocadherins
   124386324 (pcdh10b)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 CDC13_N
Other DBs
NCBI-GeneID: 124386324
NCBI-ProteinID: XP_046706039
LinkDB
Position
5:2017834..2042277
AA seq 1052 aa
MEMLLLWLALCLAHRVASQIRYSVPEETERGTFVGNIAEDLGLDLTKLASRRFQTAPGSR
GSPYLDVNVESGALLVRERIDRERVCKQSASCVLHLEVFLEDPLELFRVEVEVNDVNDNA
PSFPESDVTVEISESATPGTRFPLEAAFDPDVGSNGLRTYEITANGHFALDVQTQTDGNK
FAELVLEKPLDREQQAVHRYVLTAVDGGQPARTGTALLVVRVLDSNDNVPTFDRAVYSAS
LAENAPAGTLVIQLNATDSDEGSNGEVVYSFGSHVSSRARELFDVDARTGRIEVRGEVDF
EESNLYQLYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIAFSTVTESVSESAAPGTVIA
LLSVTDKDSGDNGRTRVEILGDVPFRLKSEFGNYYTVVTDGPLDREIADAYTVTVTARDG
GSPPLSSSKSVEVRVSDENDNAPAFSQPIYDVHVTENNVPGAYIYAVSARDPDAGDNSRV
TYTVLDRDIQGMSVLTYVSVNPENGYLYALRSFDYEQLKEFSFTVEARDAGSPELHSNAT
VHVVVVDQNDNAPAVIAPLGKNGTAREPLPRSAEPGYLVTRIVATDADDGENARLSYSIQ
RGNEDGLFRMDWRTGELRTARRVSAAKRDAQQHQQRRLYELLVEVRDHGQPPLSCSAVVQ
VALVDGLPAAASAEGRGGGGGGDRERGGAARAKDASLDLTLILIVALGSVSFVFLLAMIA
LAVRCRKDKKLNVYAGCNASCCLCCGRQARSSRGVSSGNGGSKKKQKKQKKLSKSDIMLV
QSANSADVSAHAGVGCGVGSAQVPVEESGSFGSLRRGQNYCYQVCLTPESANTDLLFLKA
CGAGASRAATDTEHSPRGGIHTTYTEQQQPDIISNGSLLSSETKHQRAELSYLVDRPRRV
NSSAFQEADIVSSKDSGHGDSEQGDSDHDATHRGHSSGADLFSNCTEECKALGHSDRCWM
PSFVPTESRQGADYRSNLHVPGMDAVPDSEVFEGDAFTGDQSFSTFGKEPLHTYQHQQHL
QASTLDTRELHALLSNSRTPYKANYLSRKRIC
NT seq 3159 nt   +upstreamnt  +downstreamnt
atggagatgctcctgctttggctcgcgctgtgtctggcgcacagggtcgcctcgcagatc
cgttactcggtaccggaggagacggaacgaggaacattcgtgggtaatatcgccgaggac
ctgggtctggacctgaccaaactcgcttcccgtcgtttccagacggcgccgggctcacgc
gggagcccgtacctggacgtgaacgtagagagcggcgcgctgctggtgcgagagcgcatc
gaccgcgagcgcgtgtgcaagcagagcgcgtcgtgcgtgctgcacctcgaagtcttcctg
gaggatccgctcgagcttttccgagtcgaggtcgaggtgaacgacgtgaacgacaacgcg
cccagcttcccggagagcgatgtcacggtggagatcagcgagagcgccacgcccggcacg
cgtttcccgctggaagcagccttcgacccggacgtgggaagcaacgggctcaggacgtac
gagatcaccgcaaacggtcactttgcgctcgacgtgcagacgcaaacggacgggaacaag
ttcgcagagctggtgctggagaagcccctggacagagagcagcaggcggtgcaccgctac
gtgctcacggcggtggatggcgggcaaccggcgcgcacgggcacggcgctcttggtggtg
cgcgttctcgactcaaacgacaacgtgccaacgtttgaccgggccgtgtactcagcgagc
ctggctgagaatgcgcccgcgggcactctggtgatccagctcaacgcgaccgactcggac
gagggctctaacggagaggtggtctactcttttggcagtcacgtgtcgagccgcgcgcgc
gagctgttcgacgtggacgcgcgcacgggccgcatcgaagtgcgcggcgaggttgacttc
gaggaaagcaacctctatcagctctatgtgcaggccaaggacatggggccaaacgctgtg
cccgcacactgtaaagtcctcgtgaaagtcacggatgtcaacgataacgcgccggagatc
gccttcagcaccgtgacagagtccgtgagcgagagcgcggccccgggcacagtgattgcg
ctgctgagcgtcaccgacaaggactctggagacaacgggcgaacgcgcgtcgagatcctc
ggtgacgtgccgttcaggctcaagtctgagtttggaaactattacacggtggtcacggat
ggcccgctggaccgcgagattgccgatgcgtacacggttacggtgacggctcgcgacggg
ggctcgcctccgctctcctcgagcaagtcggtggaggtgcgcgtctcggacgagaacgac
aacgcacccgcgttctcgcagcccatttacgacgtgcacgtcacggagaacaacgtgcct
ggcgcctacatctacgccgtgagcgcgcgggatccagacgccggcgataactccagggtg
acctacacggtcttggaccgcgacattcagggcatgtcggtcctcacatacgtgtccgtg
aacccggaaaacggctacctgtacgctctgcgctctttcgactacgagcagctcaaggag
ttcagcttcacggtggaggcgcgggacgcaggaagccccgagctgcactcaaacgccacc
gttcacgtagtcgtagtagatcagaatgacaatgcgccggccgtaatcgcgcctctgggc
aaaaacgggacagccagagagcctctgcctcgttcagccgaaccgggctacctggtcaca
cgtatagtcgccacagacgcagacgacggtgagaacgcgcgtctttcctacagcatccag
cgcggaaacgaggacggattgtttcgcatggattggcgcacgggggaattgcgcacggct
cgcagagtgtctgcggctaaacgggacgcgcagcagcaccagcagaggcgcctgtacgag
ctactagtggaggtgagagatcacggccagccgccgctctcgtgcagcgccgtggttcag
gtcgcactggtggacgggcttccagcggcggcctcggcggagggacgcggaggagggggc
ggcggcgatcgcgagcgtggtggagctgcccgtgccaaagacgcgagcctggacctcaca
ctcatcctgatcgtcgctctcggctcggtttcgtttgtctttttgctcgccatgatagcc
ctcgccgtgcgctgccgcaaagacaagaaattgaacgtgtacgcgggatgcaacgcgtcc
tgctgcctctgctgtgggcgacaggcgcgctcctcccgcggcgttagcagcggcaacggt
ggcagcaagaagaagcagaagaagcagaaaaaacttagcaagtcggacatcatgctggtg
cagagtgccaactcggcagacgtgagcgcgcacgctggagttggctgcggagtcgggagc
gcgcaggtgcccgtcgaggagtccgggagctttggctctctgcggcgcggccaaaattac
tgctatcaggtctgcctcacccctgagtccgccaacaccgacctgctcttcctgaaagca
tgcggagcgggagcgagccgcgcggccacggacaccgagcacagcccacgaggaggaata
cacaccacatacacggagcaacagcagccggacatcatctctaacgggagccttttatcc
agcgagacgaaacaccagcgggccgagctcagttacctggtggacagaccgaggcgtgtg
aacagttcggcattccaggaagcggacatcgtgagctcgaaggacagtggacacggagac
agtgagcagggagacagcgatcatgacgccacgcatcgtgggcactcctccggagcagat
ttattttcgaactgcacggaggagtgtaaggcgctgggccactcggaccgctgctggatg
cccagcttcgtgcccaccgagtctcggcagggcgccgactaccgcagcaacctgcacgtg
cctggcatggacgccgtgcccgactctgaggtatttgagggtgacgcgttcacgggcgat
cagtcattctccacgttcggcaaagagccgctccacacataccaacaccaacagcacctt
caagcctccacgctagacaccagagagctccatgcgctcctgtctaactcgcgcacgcct
tacaaagccaactatctgtcgcggaaaaggatttgttag

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