Silurus meridionalis (southern catfish): 124386394
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Entry
124386394 CDS
T08004
Symbol
ccdc88b
Name
(RefSeq) coiled-coil domain containing 88A isoform X1
Organism
smeo
Silurus meridionalis (southern catfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HOOK_N
Motif
Other DBs
NCBI-GeneID:
124386394
NCBI-ProteinID:
XP_046706178
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All DBs
Position
5:complement(21182621..21203320)
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AA seq
1640 aa
AA seq
DB search
MKDSWSEKSPGEMNKMDDNFTETLDEFMGSALVTWVHLFEDMVGDEGQNYMEVNSNSQNA
LNAQYLQLTNGIYLNEVMRIIDPNPNVEQIYHNVRDDKILRVQNFSILNRHLRSYYQENL
QQLVLMPLPNVAVLGRDPLTEGALEELRRLLLLLLGCAVQCETKQTFIQQIQSLNIETQA
ELALCIQEVTQDPSAVLPLHYGEMCALDGLELQTLLGSLARQIQSLLAQRDMHLERIAEL
SVQCESVSSPTTPPTGPWHNAPEGLSIQLADSKAKLRRLKQELEDKEDQLIDYKREIQTM
EVELKKLQCENRALQGEVRVSRSLRDEVDCLRERANKADQLQTELKTCTHRLRSMELYRT
QLKEQQQYCASLQENKALLEEQLDDTRVRCSALRELEKDNLLLRQKLMDLEAERDVERQR
VDELLEMNMRLQMDLKRPSLSVDVTQRVTHPHVLYSELESDEELQEPKTPEHHEGEHKPL
SVEVNEASSLRLLGAENENAELRRRLERLQAEQEALQTQSPEVTETLQRQTDKLKQLEEE
HQNTLKEFQNLKNENSSLKRSLEELEKIRLQEKQERSPGEVEKEIPRGECEGKDMGKEEE
ADKREKRKQEMIRAQREDGEGEEVLLKEKKEETENDPETKERGEAEGQKWTGTGKDKPES
MTTKEESKSDDEMPMQKGKQEENAREIETEVNKLHREIHALTTQLQQAVEEADQQTNLVQ
ELHSKLGEQTKKTRETEQKLALLEAESQRLKKAAESLTEARKQIEILQCESMHQEEELMR
LRSQAELQKMEAAVIPQLEGERAALERERETLKATIDSLRASVRKGDQVELNNQTLKAEL
ERLGRNLDSARRREEELEAELKESSFEIDSLSKRRDEAMLEVSRLEQEKEACQSELDCQR
REQRQKEREMARLRQQLESTTSALEHANQRACSLELQHRRVCQELKELKETVVQLEELQK
ENQQMNAQNAENSTQITSLTQELASERVQSQKLTTQVAELNQSLEELDGKLKMANSQLTQ
LQTEHARVVSEVAAFSCNSGTEVAEDSKSNRQSPMQRENQEDPHISSKDRIAESQTSENA
AIVASSEDTQSLEDNKKQSPKINSESQHHASVKLLSMEKENAMLQQERQTLLSQLAQSQT
VCTHLREQLDSLQRHSISLQESCSKLQDLNTKLQVEQTSLSSQNASVLARCREIEVRCAT
LEADSKVWQKEKEESAVRCESLRRDHERLTALQQRQEAELEELLAKHSQLKSSGRGLEAQ
YRELEARHKELMKSKAKLEEAEEEIQAERERMERAVQEQTVREKELERLRMENERYVNQQ
KEWVQVQSELLAQVSVLRSEMSTAQIERTKLEGELNMLKEQNQQLDLNNVRLNSQHQLLT
QLKGNMEEENRHLVEQNQSLAKENRALLERSLESRDQHHNQQREYLDKLNELRREKQKLV
EKIMDQYRVLEPGMSATKQPKKSNWIADRMKKLIKPKGGKEGRAHFITIGSMDILEEPGD
SVPSSPLTSAHSQEQDPSSAPASPSTLRRVSSQGDPDEPSKVVLRSARRKLGSSRHGWGL
GKGREGGVSQSFSPGDRRSRPLQRLNPPSSALWEKDHDGSPTPSEEGRGESEENTTSEHS
DSRVSSGAEDFHSSFDKPQD
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattcttggagtgagaagtcacctggtgagatgaacaagatggacgataacttc
acggaaacgttagatgagtttatgggaagcgcacttgttacatgggtgcatctttttgag
gacatggttggtgatgagggccagaactacatggaggttaactccaactcccagaatgca
ctgaatgcacagtacctgcaactaacgaatggcatctacctcaatgaagttatgagaatc
attgatcctaatcccaatgtagagcagatctatcacaacgtgagagacgacaagattctt
cgggtgcagaacttctccatcctcaaccggcaccttaggtcttactatcaggaaaatctt
cagcagttggttttgatgcctcttcctaatgttgcggttttggggcgagatccactcacg
gagggggctctggaagagctaagaaggttgctgctgcttttattgggatgtgcagttcag
tgtgagacgaagcaaacgttcattcagcagatacagtccctcaacatcgagactcaggca
gaacttgctctctgtatacaggaggtgactcaagacccgagtgcggtcctgccactgcat
tatggagagatgtgcgcattggatgggttggaattacagacactgctcggctctcttgct
cgtcagatccagagccttttggctcagcgagacatgcatctagagagaatagcagagctg
agtgtgcagtgcgagtccgtttcgtcccccacgacgccccctacgggcccctggcacaat
gctcctgagggactgtccatccaactggcagatagcaaagccaaactacggcgactcaaa
caggaactggaggataaagaagatcaattaatcgattacaagcgagaaatacaaactatg
gaggtggaattaaagaaactgcagtgtgagaaccgggcactgcagggtgaggttcgtgtc
agtcggagtctgcgagacgaagtggactgtctgcgtgagcgtgcaaacaaagcagaccag
ctacagacagagctgaaaacctgcacacatcgtctgcggagcatggagctctaccgcact
caactgaaggagcagcagcaatactgtgcttcactgcaggagaacaaggccctgctggaa
gagcaactggatgacacacgagttcgatgttctgccttacgggaactggaaaaagacaat
ctattgctcagacagaaactcatggatttggaggcggagagggatgtggagaggcagagg
gtcgatgaactgctagaaatgaatatgagactgcagatggatctgaagcgcccatctctt
tctgttgatgtcacacagcgagtgactcatcctcatgtcctctactcagagctggaatct
gatgaagagcttcaggaacccaaaacccctgagcatcatgaaggtgaacacaagccactg
agtgttgaggtgaatgaagcgtcctcgctaagacttctgggagctgagaatgaaaacgcc
gaactgagaagacgtctcgagcgccttcaagccgagcaagaggctctgcagacacaatct
cctgaggtgacagagactcttcagagacagacagacaaactcaaacaactggaagaagag
caccagaataccctcaaagagtttcagaacctgaagaatgaaaattccagtctaaagaga
agccttgaagagctggagaaaatcagactccaagaaaagcaggagaggtcacctggagag
gttgagaaagagattccaagaggcgagtgtgaaggaaaagacatgggaaaagaggaggag
gcagacaaaagggagaagagaaagcaggagatgataagagcacaaagggaggatggagaa
ggagaagaagtcctcctaaaagagaaaaaagaggagaccgaaaatgatccagagacaaaa
gaacgaggagaagcagaaggacagaaatggactgggacaggtaaagataaacccgaaagc
atgacaacaaaggaggaaagcaaatcagatgacgagatgcccatgcaaaaaggaaaacaa
gaggaaaatgcaagagagatagagacagaggtgaataagctccacagggaaattcatgct
ctaaccactcagctccagcaggcagtagaggaggcagatcagcaaacaaatctggttcaa
gagctacactccaaactgggtgagcagactaagaagactcgggagacagagcagaaactg
gctcttctggaagctgagagccagagactgaagaaagcagcagaaagcctcacagaggcc
aggaaacagatagagattttgcagtgcgaatccatgcaccaggaggaggagctgatgcgc
ctgcgcagtcaagcagagctgcagaagatggaggctgcagttattcctcagctagaggga
gagagagctgcactggaaagggagagagaaaccctcaaggctaccatagattctcttcga
gcttcagtgcgcaagggtgatcaggttgagttgaacaatcaaactctaaaggcggagttg
gaacgtttaggccggaatttggactctgcccgtcgacgagaggaagaactagaagctgag
ctgaaggagtctagctttgaaatcgactctttgagcaagaggcgggatgaagccatgctg
gaggtttcacggctggagcaggagaaggaggcctgtcagtctgagctcgactgtcaacgt
cgtgagcagagacagaaggagcgtgagatggccagacttcggcagcagctagaaagcacc
acctcggccctggaacatgccaaccagagggcctgcagcctggagctccagcacagacgg
gtgtgtcaggaacttaaagagcttaaagagaccgtggttcaactagaggaactacaaaaa
gagaaccaacaaatgaatgcacaaaatgctgaaaacagcacacagatcacttctctaaca
caggagttagccagcgagagagtacaatctcagaagctgaccactcaggttgctgagtta
aaccagtcacttgaagaattggacggcaagcttaaaatggccaactcacaactcacacag
ttgcaaactgagcatgccagagtggtgtcagaggtcgctgccttttcctgcaattcaggc
actgaggttgctgaagattcaaaatcaaacagacaaagtccaatgcagagagaaaatcaa
gaggatccacatatcagctctaaggatcggattgcagaaagccagacgtcagaaaatgct
gctattgtcgcttcctctgaggacacacaatccctagaagacaataaaaaacagagtcct
aaaattaacagtgagagccagcaccatgcaagtgtgaaactgctcagtatggagaaagag
aatgccatgctgcagcaggaacggcagacattgctgtcacaactggcgcagtcacagaca
gtctgtactcatctgcgagaacagctggactcgctgcaacgtcactctatcagcctgcag
gagagctgctctaaactgcaggaccttaacaccaaactacaggtggagcagacttcttta
agctcccaaaatgcctctgtgttggcacggtgcagagagatcgaggtgcgctgcgctact
ctagaggctgattctaaggtgtggcagaaggagaaagaagaatcagcagtgcgttgcgaa
tcattgagacgggaccatgagaggctgacagctttacagcagaggcaggaggcagagctg
gaagagctactggccaaacacagtcagctaaagagcagcggtcgaggtttagaggctcaa
tacagagaactagaggccaggcataaagagctgatgaagagcaaagctaagctggaggag
gctgaggaagagatacaagcagagagagagagaatggagagggccgtacaggagcagact
gtaagagagaaagagctggaaaggctgagaatggagaatgagaggtatgtgaaccagcaa
aaggagtgggtccaggtgcagtcggagttactggcccaggtttctgttctgcgtagtgaa
atgagcacggcccagatagagcgaaccaaactggagggagaactcaacatgctcaaagaa
cagaaccaacaacttgacctcaacaatgtccgcctcaacagtcagcaccagcttcttact
cagttgaaagggaatatggaggaggaaaacaggcacctggtagagcagaaccagagtcta
gccaaagagaaccgagcccttctggagcgcagcctggagagccgagatcagcaccacaac
cagcagagagaatacctcgataaactgaacgagctacgcagagagaagcagaaactggtg
gagaagataatggatcaatatcgtgttctggagcctggcatgtctgcaaccaaacaaccc
aagaagtctaattggatcgcggaccgaatgaagaagctgataaagcctaaaggaggcaag
gaaggtcgagctcactttatcaccataggcagcatggacatcctggaggagcctggagac
tcggtgccgtcgtccccccttacatcagctcacagtcaggagcaagaccccagcagtgcc
ccagcgtctccttcgaccttgaggagagtgtcctctcagggagatccagacgagccatcc
aaagtggttctgaggtcagcacgacgtaaactgggctcctccagacatggctggggttta
ggcaagggtcgagagggaggcgtgtcccaatcgttcagtccgggagatcgtcgctcacgg
ccacttcagcgcttaaacccgccatccagtgccttgtgggaaaaagaccacgacgggagt
ccaacacctagtgaggaaggaagaggtgagagtgaagagaacaccacttctgagcactca
gatagtcgcgtctcctccggagctgaagattttcattccagttttgacaaaccccaggac
tag
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integrated database retrieval system
