Silurus meridionalis (southern catfish): 124387605
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Entry
124387605 CDS
T08004
Symbol
parp2
Name
(RefSeq) poly [ADP-ribose] polymerase 2 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03410
Base excision repair
smeo04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124387605 (parp2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124387605 (parp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124387605 (parp2)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124387605 (parp2)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124387605 (parp2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
124387605 (parp2)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124387605 (parp2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124387605 (parp2)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124387605 (parp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
WWE
DUF3450
RL11D
Motif
Other DBs
NCBI-GeneID:
124387605
NCBI-ProteinID:
XP_046707982
LinkDB
All DBs
Position
6:5725758..5739867
Genome browser
AA seq
642 aa
AA seq
DB search
MRRTRSCNKPEVKEELGTEWAWQDDDGQWVSYPSEVCSEINTAVQAGKKRVCVSLVQKYE
LDLVKMTQTNTKTKYRRQIRKTGCDDEGEGPSGLRVKEEEMPVTKKRRGGVKECGNTEEQ
DSKEMLKTIVMKGKAPVDAECKAKLGKAHVYSEGEDVYDVMLNQTNLQFNNNKYYLIQLL
QDDQVQVYSVWMRWGRVGKAGQNSLVPCGSDLVKAKEVFMKKFFDKTKNEWTQRANFEKI
PGKYDMVFMDYSFRGREENMAVMSTPYEIKPSQLDVRLQSLMELICDIKAMEECVLEMKF
DVKKAPLGKLTVEQIRAGYASLKRIEECLRKKSSKKQLLEACNQFYTRIPHDFGLRTPPI
ICNEEDLKKKIALLETLSDIEVAVKMVLSESVSDENPLDKHYRSLNCLLQPLDPHTHEYQ
VIVKYLQSTHAATHTDYTMTVLDIFSVEREAEKDNFLSHLHNRTLLWHGSRLSNWVGILS
QGLRVAPPEAPVTGYMFGKGIYFADMSSKSANYCFTTPKNNVGLLSLSEVALGDCNELLD
ANYDADKLPSGKHSTKGLGQTAPDPNHSITLDGVKVPFGPAVRTSVGQSGGYTLLYNEFV
VYNPAQIRIKYLLRIQFNYSALCSIVCGAKARVWGLKRASGG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaactcggagctgcaacaaacctgaggtgaaggaagaactgggaacagagtgg
gcgtggcaggatgatgatggacagtgggtgtcatacccctctgaggtgtgttctgagatc
aacactgcagttcaggctgggaagaagcgtgtgtgtgtgtcgcttgttcagaagtatgag
ctggatctggtgaagatgacccagaccaacactaagactaaataccgccgtcaaatccgt
aagacagggtgtgatgatgaaggtgaggggccgagtgggctcagggttaaagaggaggaa
atgcctgttactaaaaagagacgaggaggagtgaaggagtgtggaaacacagaggaacag
gacagtaaagaaatgctaaagacaatcgtgatgaaggggaaagctccagtcgatgcagag
tgtaaagccaaactgggaaaggcacatgtctacagtgagggggaggatgtgtatgatgtg
atgttaaaccagactaacctgcagtttaacaataataagtactacctgatccaacttctg
caggatgaccaggtccaggtctacagcgtgtggatgaggtgggggcgagtgggaaaagca
ggacagaacagtttggtaccctgcggttcggatctggttaaagccaaagaagtctttatg
aaaaagttctttgataagactaaaaacgagtggacacagcgagcaaactttgagaaaatt
cctggaaaatacgacatggtgtttatggactacagcttcagaggcagagaggagaacatg
gcagtgatgtccactccctatgagataaaaccatcacagctagatgtcagacttcagtct
ctcatggagctgatctgtgacattaaagccatggaggagtgtgtgctcgagatgaagttt
gacgttaaaaaagctcctctcgggaagctgactgtggagcagattcgagcaggctatgcc
tctctgaagagaatcgaagagtgtctgagaaagaaaagcagcaaaaaacagcttctggag
gcctgcaaccaattttacactcgtataccacatgacttcggtttgcgaactcctccaatt
atctgcaatgaggaggatctgaagaagaaaatcgctctgctggagactctcagtgatatc
gaggttgcagtgaagatggtactgtcagaatcagtgagtgatgaaaaccctctggataaa
cactacaggtctctaaactgtcttctccaacccctcgatccacacacacacgaataccag
gtgattgtgaaatatctgcagtcgactcacgcagctactcacactgattacaccatgaca
gtgctggacatctttagtgtagagcgagaagcagagaaagacaatttcctgtctcatctt
cacaacaggacattactgtggcatggttctcgtctgtctaactgggtggggattctcagt
cagggtctccgagttgcacctcctgaagctccagtcacaggctatatgtttggaaaaggg
atttattttgctgacatgtcgtctaagagtgctaactactgtttcaccactccgaagaac
aacgtgggattactgtcactgagcgaggttgctctcggagactgtaacgagcttctggat
gctaattacgatgctgacaaactgccttcagggaaacacagcactaaaggtctgggccag
accgccccggaccccaaccactccatcactctggatggtgtgaaggttcctttcggacct
gcagtgagaaccagcgtgggacagagcggcggatacacactcctgtataatgagtttgtg
gtgtacaaccctgctcagatacgcataaaatacctgctgaggatccagtttaattattca
gctctgtgcagtatcgtgtgtggggctaaagcgcgcgtctgggggctgaagcgcgcgtct
gggggctga
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