Silurus meridionalis (southern catfish): 124388113
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Entry
124388113 CDS
T08004
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124388113 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124388113 (lamc1)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
F420_ligase
Death
Motif
Other DBs
NCBI-GeneID:
124388113
NCBI-ProteinID:
XP_046708741
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Position
6:complement(1884667..1938978)
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AA seq
1623 aa
AA seq
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MRFLRNSSAQLSERGARVPGEARGRTEATMRGVALVLSLVAVCATRVHAAMDECVDEQNR
GPQRCMPEFVNAAFNVTVVATNTCGSPPEEYCVQTGVTGVTKSCHICDARDPRQHHSAVY
LTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFVIYKR
TREDGPWIPYQYYSGSCEKTYSKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTL
EGRPSAYNFDSSAVLQDWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGR
CKCNGHASECVKNEYSKLVCNCKHNTGGDDCNECKPFYNDRPWRRATADNANECLPCNCN
GKSRECDFDLSLYRATGHGGRCRNCADNTDGPNCERCLANYYRMGPDQRCLACNCNPVGS
LSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSTQECDVNTGRCQC
KGNVDGFSCDRCKLGFFNLDSQNPQGCTPCFCFHHSTVCESAEGYSIHRITSTFDRGDED
WKGQQRDGSSVPVQWSPSSQEISLISEDYFPMYFVAPEKFLGNHFLSYGQNLTLNFRVER
RDARLSAEDVVLEGAGHRIAVPLIAQGNSYPGDQMQTFVFRLHHTPDSPWRPELQHAEFQ
KLLHNLTAIKIRGTYSERSAGYLDNVSLVTARRGHGDPARWVERCTCPPGYEGQHCGRCA
LGYRRSRPALGQFSPCEACNCNGHSDTCDPETGMCDCQDNTAGMSCERCKDGFYNNATVG
SPSVCIKCPCPAGATCAVVPKTREVVCTNCPAGTTGKRCELCDDGFFGNPQASSGPTRPC
RACNCNNNIDPNAVGNCDRDSGECLKCIYNTNGFFCDRCKEGFYGNALASNPADKCKPCA
CSPYGTVNGDSTCMQVTGQCECLPHVINRDCSACEAGFYNLQSKEGCQRCNCNPVGSTNG
QCDIASGQCECQPGVTGQHCDRCEVNFFGFGSSGCKPCDCDPEGSRTAQCRDDGRCECRS
GFVGTRCDMCEENYFYNRSISRCQQCPNCYSLVRDKVNQQRQKLHDLQNLIDNLGSQDTV
SDKAFEDRLKEAEKTIMDLLKEAQASKEADKDLLDRLKSVNDTLTTQWNRLENIRNTVED
TGNLADRARGRVRDTEKLIERARDELDKAKDAISKVDIKIPTTTGDPNNMTLLAEEARSL
AEKHKTDADQIEKIAKDANDTSTKAYNLLMKTLDGESKINKDIDDLNKKYNDAKDLAKNL
EKQATKVRSEAEEAGDKAMKIYANLTSLPPFDLKSLEDEANKIKKEASDLDKLIDKTEKE
YVDLREDLRGKENDVRRLLEKGKTEQQTADQLLARADAAKALAEEAKEKGTATFKEAEAI
LNNLRDFDRRVNDNKTTAEEALKRIPQINATINAANEKTRQAEAALGNAEADAKDAKSKA
EQAEKIASNVQKGSAKTKADAEKAFADTMKLDDEVKDMMKQLADAENELEKKQDEAAQDM
MMASMASANAKEADENARKAKNSVRTVLDAITTLLSQLGNIDKVDLSKLDQIDRSLQDAK
DKMAGSDLDRKLKELEDISKSQEDMIGDYDRQIREIRADIANLNDIKNTLPNGCFNTPSL
ERP
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgagattcctgcgtaacagctcagcacagctttccgagcgaggcgcacgggttccggga
gaagcgagaggacgcacggaggcaacaatgcgcggcgtggccctcgtgctgagtttggtg
gccgtgtgcgcgacgcgcgtccacgcggccatggacgagtgcgtggacgagcagaaccgt
gggcctcagcgctgcatgcctgagttcgtgaacgcggcgttcaacgtgaccgtcgtggcg
accaacacgtgcggctctccgcccgaagagtactgcgtgcagaccggcgtcaccggcgtc
accaagtcgtgccacatctgcgatgcccgcgatccgcgccagcatcacagcgccgtctac
ctcaccgactacaacaaccaagccgacaccacctggtggcaaagccagaccatgctcgca
ggggtccagtatcccaactccatcaacctcaccctgcacttaggaaaggcctttgacatc
acctacgtgcgcctgaagttccacaccagccgcccggagagcttcgtcatctacaagcgc
acgcgcgaggacggcccgtggattccgtaccagtactacagtggctcgtgcgagaaaacc
tacagcaaggtgaacagaggcttcatccgcaccggcgaggacgaacagcaggcgctctgc
acggacgagttcagtgacatctcgccgctcaccggcggaaacgtggccttctcgacgctc
gagggacgccccagcgcgtacaacttcgacagcagcgcggtgctccaggattgggtgacg
gcgacggacatccgagtgaccctgaacaggctgaacacattcggagacgaagtcttcaat
gaccccaaagtgctcaagtcatactactacgctatctccgactttgccgtaggaggacgg
tgcaagtgtaacggccatgccagtgagtgcgtgaagaacgagtacagcaagttggtgtgt
aactgcaagcacaacaccggaggcgacgactgcaacgagtgcaagccattctataacgac
cgcccgtggcgacgggccactgccgacaacgccaacgagtgcctgccatgcaactgcaac
ggcaagagcagagaatgcgacttcgacctgtccctgtaccgcgccacggggcacggaggc
cgctgccgaaactgcgccgacaacacggatggccccaactgtgagcgctgcctggccaat
tactaccgaatgggtccggatcagcgctgcctggcctgcaactgcaacccagtcggctct
ctgagcactcagtgcgacaacacagggcgttgcagctgcaagccgggtgtcatgggtgac
aagtgcgaccgctgtcagcccggatatcactcgctgaccgaagcaggctgcaggccctgt
tcctgcaacccttcgggaagcacacaggagtgcgacgtcaatacgggacgctgccagtgc
aagggaaacgtagacggattcagctgcgacaggtgtaaactgggcttcttcaacctggac
agccagaaccctcagggatgcacgccttgcttctgctttcatcattccacagtgtgcgag
agcgcagagggctacagcatccaccgcatcacgtccaccttcgatcgaggtgacgaagac
tggaagggtcagcagagagatggctccagcgtgccagtgcagtggtctccgagctctcag
gagatctcgctcatttcggaggattacttccccatgtattttgtggctccagagaagttt
ttggggaaccacttcctgagctacggccagaacctgacgctcaacttccgggtagagcgc
cgtgacgcgcgtctctcagccgaggacgtggtgctggagggagctgggcaccgcatcgcc
gtgccccttatcgcccagggaaactcgtatcctggagaccagatgcagacctttgtgttc
aggcttcatcacaccccagattcgccctggagaccagagctgcaacatgcagagttccag
aagcttctccacaacctgactgccatcaagatccgtggaacctacagcgagagaagtgcc
ggatatctggataacgtgtccctggtgactgcgcggcgaggacacggggatccggcgcgc
tgggtcgagaggtgtacgtgtcctcccggttacgagggtcagcactgtgggaggtgcgct
ttggggtacaggcgaagccgaccggcgctgggccagttcagcccttgtgaagcctgcaac
tgcaacggccacagcgacacctgtgaccctgaaacaggaatgtgcgactgccaggacaat
acagccggcatgagttgcgaaaggtgtaaggacggtttctacaacaatgccacggtcggt
tcaccttcagtctgcataaagtgcccgtgtcccgcaggcgccacttgcgccgtcgtgccc
aaaaccagagaggtggtgtgcaccaactgtccagccggcaccacagggaagcggtgcgag
ctgtgcgacgacgggttcttcggcaaccctcaggcctccagcggtcccacgaggccgtgc
cgggcgtgcaactgcaacaacaacattgacccgaacgccgtgggcaactgcgaccgcgac
agcggcgagtgcctgaaatgcatctacaacaccaacggcttcttctgcgaccgctgcaaa
gagggtttctacggcaacgccttggccagcaaccccgccgacaagtgcaaaccttgcgct
tgctcaccgtacggcacggtgaacggagactcgacgtgcatgcaggtcacggggcagtgc
gagtgcctccctcacgtcatcaacagagactgcagtgcctgcgaggccggcttctacaac
ctgcagagcaaagaaggctgccaaaggtgcaactgcaaccccgtcggctccaccaacggc
cagtgcgacatcgcgagcggccaatgtgagtgtcagcctggagtcacggggcagcactgc
gatcgctgcgaggtcaacttctttggcttcggctcgtccggatgcaaaccctgtgattgt
gaccccgagggctcccggacggctcaatgcagagacgacgggcgttgcgagtgtcgctct
ggcttcgtcggtactcgctgcgatatgtgcgaggagaactacttctacaaccgctccatt
tccagatgccagcagtgtcctaactgctacagcctcgtcagggacaaggtgaaccagcag
aggcagaagctccacgacttgcaaaatctgatcgacaacctgggcagccaggatacagtg
agcgacaaggccttcgaggaccgcctcaaagaggcagagaaaaccatcatggatctcctc
aaggaggctcaggccagcaaagaggcggacaaagacctcttggatcgcttgaagagcgtc
aacgacacgctgacgacgcagtggaaccggctggagaacatcaggaacaccgtggaggac
accggaaacctggcggacagggcgcgcggcagagtgcgcgacacggagaagctgatcgag
cgcgctcgggacgagctagacaaggcgaaggacgccatcagcaaagtggatataaaaatt
cccacaaccactggagatccgaacaacatgacgctcctggctgaggaggcacgcagtctg
gcagagaagcacaagacggacgcggatcagatcgagaagatcgcgaaagacgccaacgac
acttcgacgaaggcctacaacctgctcatgaagactttggatggcgagagcaaaatcaac
aaggacatcgacgacctgaacaagaagtacaatgatgccaaggatctggcgaagaacctg
gagaaacaggccaccaaagtacgctccgaagccgaagaagcgggagacaaggctatgaag
atctacgcgaacttgaccagcctgcctccgtttgacctcaaatcgctcgaggacgaagcc
aataaaataaagaaggaggcgtcggacctggataagctcatagataagactgagaaggaa
tacgtcgatctaagagaagacttgcgaggaaaagaaaacgatgtccgccgactgctagag
aaggggaagaccgagcaacagacagcggatcagttgctggctcgagccgatgctgccaag
gccctggccgaggaggcaaaggagaaaggcacggccaccttcaaggaggcagaggccatt
cttaacaacctccgggacttcgaccggagagtgaacgacaacaagacgacagccgaagag
gccctgaagcgcatcccacagatcaacgcgacaatcaacgctgccaacgagaagacccgg
caggcagaggccgccctcggcaacgcagaggccgacgccaaagacgccaaatccaaagcg
gagcaagcggagaaaatagccagcaacgtccagaagggttctgccaaaaccaaggcagat
gccgaaaaagccttcgccgacaccatgaagttggacgacgaggtaaaggacatgatgaag
cagctggcagacgctgagaacgagctggagaagaagcaagacgaagccgctcaggacatg
atgatggcttctatggcatcagccaacgccaaggaagcggatgaaaacgcccgcaaggcg
aagaactcggtccgcactgtcctcgatgccatcaccaccctgctcagccagctcggcaat
atcgacaaggtggacctgagtaagctggaccagatcgaccggtcgctgcaggacgcgaag
gacaaaatggccggcagcgacttggacaggaagctgaaggagctggaagacatttccaag
agccaggaggacatgatcggcgattacgaccggcagatccgcgagatccgcgccgacatc
gccaacctcaacgacatcaaaaacaccctgccgaacggctgcttcaacacgccgtccctc
gagcggccttaa
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