KEGG   Silurus meridionalis (southern catfish): 124388113
Entry
124388113         CDS       T08004                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04510  Focal adhesion
smeo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124388113 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124388113 (lamc1)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B F420_ligase Death
Other DBs
NCBI-GeneID: 124388113
NCBI-ProteinID: XP_046708741
LinkDB
Position
6:complement(1884667..1938978)
AA seq 1623 aa
MRFLRNSSAQLSERGARVPGEARGRTEATMRGVALVLSLVAVCATRVHAAMDECVDEQNR
GPQRCMPEFVNAAFNVTVVATNTCGSPPEEYCVQTGVTGVTKSCHICDARDPRQHHSAVY
LTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFVIYKR
TREDGPWIPYQYYSGSCEKTYSKVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTL
EGRPSAYNFDSSAVLQDWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGR
CKCNGHASECVKNEYSKLVCNCKHNTGGDDCNECKPFYNDRPWRRATADNANECLPCNCN
GKSRECDFDLSLYRATGHGGRCRNCADNTDGPNCERCLANYYRMGPDQRCLACNCNPVGS
LSTQCDNTGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSTQECDVNTGRCQC
KGNVDGFSCDRCKLGFFNLDSQNPQGCTPCFCFHHSTVCESAEGYSIHRITSTFDRGDED
WKGQQRDGSSVPVQWSPSSQEISLISEDYFPMYFVAPEKFLGNHFLSYGQNLTLNFRVER
RDARLSAEDVVLEGAGHRIAVPLIAQGNSYPGDQMQTFVFRLHHTPDSPWRPELQHAEFQ
KLLHNLTAIKIRGTYSERSAGYLDNVSLVTARRGHGDPARWVERCTCPPGYEGQHCGRCA
LGYRRSRPALGQFSPCEACNCNGHSDTCDPETGMCDCQDNTAGMSCERCKDGFYNNATVG
SPSVCIKCPCPAGATCAVVPKTREVVCTNCPAGTTGKRCELCDDGFFGNPQASSGPTRPC
RACNCNNNIDPNAVGNCDRDSGECLKCIYNTNGFFCDRCKEGFYGNALASNPADKCKPCA
CSPYGTVNGDSTCMQVTGQCECLPHVINRDCSACEAGFYNLQSKEGCQRCNCNPVGSTNG
QCDIASGQCECQPGVTGQHCDRCEVNFFGFGSSGCKPCDCDPEGSRTAQCRDDGRCECRS
GFVGTRCDMCEENYFYNRSISRCQQCPNCYSLVRDKVNQQRQKLHDLQNLIDNLGSQDTV
SDKAFEDRLKEAEKTIMDLLKEAQASKEADKDLLDRLKSVNDTLTTQWNRLENIRNTVED
TGNLADRARGRVRDTEKLIERARDELDKAKDAISKVDIKIPTTTGDPNNMTLLAEEARSL
AEKHKTDADQIEKIAKDANDTSTKAYNLLMKTLDGESKINKDIDDLNKKYNDAKDLAKNL
EKQATKVRSEAEEAGDKAMKIYANLTSLPPFDLKSLEDEANKIKKEASDLDKLIDKTEKE
YVDLREDLRGKENDVRRLLEKGKTEQQTADQLLARADAAKALAEEAKEKGTATFKEAEAI
LNNLRDFDRRVNDNKTTAEEALKRIPQINATINAANEKTRQAEAALGNAEADAKDAKSKA
EQAEKIASNVQKGSAKTKADAEKAFADTMKLDDEVKDMMKQLADAENELEKKQDEAAQDM
MMASMASANAKEADENARKAKNSVRTVLDAITTLLSQLGNIDKVDLSKLDQIDRSLQDAK
DKMAGSDLDRKLKELEDISKSQEDMIGDYDRQIREIRADIANLNDIKNTLPNGCFNTPSL
ERP
NT seq 4872 nt   +upstreamnt  +downstreamnt
atgagattcctgcgtaacagctcagcacagctttccgagcgaggcgcacgggttccggga
gaagcgagaggacgcacggaggcaacaatgcgcggcgtggccctcgtgctgagtttggtg
gccgtgtgcgcgacgcgcgtccacgcggccatggacgagtgcgtggacgagcagaaccgt
gggcctcagcgctgcatgcctgagttcgtgaacgcggcgttcaacgtgaccgtcgtggcg
accaacacgtgcggctctccgcccgaagagtactgcgtgcagaccggcgtcaccggcgtc
accaagtcgtgccacatctgcgatgcccgcgatccgcgccagcatcacagcgccgtctac
ctcaccgactacaacaaccaagccgacaccacctggtggcaaagccagaccatgctcgca
ggggtccagtatcccaactccatcaacctcaccctgcacttaggaaaggcctttgacatc
acctacgtgcgcctgaagttccacaccagccgcccggagagcttcgtcatctacaagcgc
acgcgcgaggacggcccgtggattccgtaccagtactacagtggctcgtgcgagaaaacc
tacagcaaggtgaacagaggcttcatccgcaccggcgaggacgaacagcaggcgctctgc
acggacgagttcagtgacatctcgccgctcaccggcggaaacgtggccttctcgacgctc
gagggacgccccagcgcgtacaacttcgacagcagcgcggtgctccaggattgggtgacg
gcgacggacatccgagtgaccctgaacaggctgaacacattcggagacgaagtcttcaat
gaccccaaagtgctcaagtcatactactacgctatctccgactttgccgtaggaggacgg
tgcaagtgtaacggccatgccagtgagtgcgtgaagaacgagtacagcaagttggtgtgt
aactgcaagcacaacaccggaggcgacgactgcaacgagtgcaagccattctataacgac
cgcccgtggcgacgggccactgccgacaacgccaacgagtgcctgccatgcaactgcaac
ggcaagagcagagaatgcgacttcgacctgtccctgtaccgcgccacggggcacggaggc
cgctgccgaaactgcgccgacaacacggatggccccaactgtgagcgctgcctggccaat
tactaccgaatgggtccggatcagcgctgcctggcctgcaactgcaacccagtcggctct
ctgagcactcagtgcgacaacacagggcgttgcagctgcaagccgggtgtcatgggtgac
aagtgcgaccgctgtcagcccggatatcactcgctgaccgaagcaggctgcaggccctgt
tcctgcaacccttcgggaagcacacaggagtgcgacgtcaatacgggacgctgccagtgc
aagggaaacgtagacggattcagctgcgacaggtgtaaactgggcttcttcaacctggac
agccagaaccctcagggatgcacgccttgcttctgctttcatcattccacagtgtgcgag
agcgcagagggctacagcatccaccgcatcacgtccaccttcgatcgaggtgacgaagac
tggaagggtcagcagagagatggctccagcgtgccagtgcagtggtctccgagctctcag
gagatctcgctcatttcggaggattacttccccatgtattttgtggctccagagaagttt
ttggggaaccacttcctgagctacggccagaacctgacgctcaacttccgggtagagcgc
cgtgacgcgcgtctctcagccgaggacgtggtgctggagggagctgggcaccgcatcgcc
gtgccccttatcgcccagggaaactcgtatcctggagaccagatgcagacctttgtgttc
aggcttcatcacaccccagattcgccctggagaccagagctgcaacatgcagagttccag
aagcttctccacaacctgactgccatcaagatccgtggaacctacagcgagagaagtgcc
ggatatctggataacgtgtccctggtgactgcgcggcgaggacacggggatccggcgcgc
tgggtcgagaggtgtacgtgtcctcccggttacgagggtcagcactgtgggaggtgcgct
ttggggtacaggcgaagccgaccggcgctgggccagttcagcccttgtgaagcctgcaac
tgcaacggccacagcgacacctgtgaccctgaaacaggaatgtgcgactgccaggacaat
acagccggcatgagttgcgaaaggtgtaaggacggtttctacaacaatgccacggtcggt
tcaccttcagtctgcataaagtgcccgtgtcccgcaggcgccacttgcgccgtcgtgccc
aaaaccagagaggtggtgtgcaccaactgtccagccggcaccacagggaagcggtgcgag
ctgtgcgacgacgggttcttcggcaaccctcaggcctccagcggtcccacgaggccgtgc
cgggcgtgcaactgcaacaacaacattgacccgaacgccgtgggcaactgcgaccgcgac
agcggcgagtgcctgaaatgcatctacaacaccaacggcttcttctgcgaccgctgcaaa
gagggtttctacggcaacgccttggccagcaaccccgccgacaagtgcaaaccttgcgct
tgctcaccgtacggcacggtgaacggagactcgacgtgcatgcaggtcacggggcagtgc
gagtgcctccctcacgtcatcaacagagactgcagtgcctgcgaggccggcttctacaac
ctgcagagcaaagaaggctgccaaaggtgcaactgcaaccccgtcggctccaccaacggc
cagtgcgacatcgcgagcggccaatgtgagtgtcagcctggagtcacggggcagcactgc
gatcgctgcgaggtcaacttctttggcttcggctcgtccggatgcaaaccctgtgattgt
gaccccgagggctcccggacggctcaatgcagagacgacgggcgttgcgagtgtcgctct
ggcttcgtcggtactcgctgcgatatgtgcgaggagaactacttctacaaccgctccatt
tccagatgccagcagtgtcctaactgctacagcctcgtcagggacaaggtgaaccagcag
aggcagaagctccacgacttgcaaaatctgatcgacaacctgggcagccaggatacagtg
agcgacaaggccttcgaggaccgcctcaaagaggcagagaaaaccatcatggatctcctc
aaggaggctcaggccagcaaagaggcggacaaagacctcttggatcgcttgaagagcgtc
aacgacacgctgacgacgcagtggaaccggctggagaacatcaggaacaccgtggaggac
accggaaacctggcggacagggcgcgcggcagagtgcgcgacacggagaagctgatcgag
cgcgctcgggacgagctagacaaggcgaaggacgccatcagcaaagtggatataaaaatt
cccacaaccactggagatccgaacaacatgacgctcctggctgaggaggcacgcagtctg
gcagagaagcacaagacggacgcggatcagatcgagaagatcgcgaaagacgccaacgac
acttcgacgaaggcctacaacctgctcatgaagactttggatggcgagagcaaaatcaac
aaggacatcgacgacctgaacaagaagtacaatgatgccaaggatctggcgaagaacctg
gagaaacaggccaccaaagtacgctccgaagccgaagaagcgggagacaaggctatgaag
atctacgcgaacttgaccagcctgcctccgtttgacctcaaatcgctcgaggacgaagcc
aataaaataaagaaggaggcgtcggacctggataagctcatagataagactgagaaggaa
tacgtcgatctaagagaagacttgcgaggaaaagaaaacgatgtccgccgactgctagag
aaggggaagaccgagcaacagacagcggatcagttgctggctcgagccgatgctgccaag
gccctggccgaggaggcaaaggagaaaggcacggccaccttcaaggaggcagaggccatt
cttaacaacctccgggacttcgaccggagagtgaacgacaacaagacgacagccgaagag
gccctgaagcgcatcccacagatcaacgcgacaatcaacgctgccaacgagaagacccgg
caggcagaggccgccctcggcaacgcagaggccgacgccaaagacgccaaatccaaagcg
gagcaagcggagaaaatagccagcaacgtccagaagggttctgccaaaaccaaggcagat
gccgaaaaagccttcgccgacaccatgaagttggacgacgaggtaaaggacatgatgaag
cagctggcagacgctgagaacgagctggagaagaagcaagacgaagccgctcaggacatg
atgatggcttctatggcatcagccaacgccaaggaagcggatgaaaacgcccgcaaggcg
aagaactcggtccgcactgtcctcgatgccatcaccaccctgctcagccagctcggcaat
atcgacaaggtggacctgagtaagctggaccagatcgaccggtcgctgcaggacgcgaag
gacaaaatggccggcagcgacttggacaggaagctgaaggagctggaagacatttccaag
agccaggaggacatgatcggcgattacgaccggcagatccgcgagatccgcgccgacatc
gccaacctcaacgacatcaaaaacaccctgccgaacggctgcttcaacacgccgtccctc
gagcggccttaa

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