Silurus meridionalis (southern catfish): 124389706
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Entry
124389706 CDS
T08004
Symbol
col10a1a
Name
(RefSeq) LOW QUALITY PROTEIN: collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
smeo
Silurus meridionalis (southern catfish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
124389706
NCBI-ProteinID:
XP_046711107
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Position
8:3326296..3331263
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AA seq
651 aa
AA seq
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MDLRVASFLLLLVALVAGHGERYMVKKVVKAPYAVKSHVVSVAGEPGIPGEPGEAGPPGP
PGPPGQNGEGLPGPQGPPGQPGPAGYSAPGKPGTPGGPGKPGADGAPGPKGDTGAPGPQG
PRGAPGPSGSPGPAGLSSTGKPGAAGLPGSMGPXGEPGAKGHPGIPGAPGQKGDRGIGIQ
GPAGETGATGPMGPVGAPGQPGVGKPGKPGYPGEPGKGGSPGRDGEPGPMGPTGPKGHTG
APGVGMPGKPGENGAPGLPGPMGHKGPQGATGAPGAPGSPGYGNPGASGSKGDTGPVGSP
GATGQKGEPGARGPTGYTGATGPVGPAGSQGPRGFPGEKGATGEKGETGPIGPQGFKGHK
GDQGAPGGDGKQGYPGATGPQGQRGPTGAPGSKGETGEAGATGAPGATGPVGPKGHTGNT
GPAGETGPEGAPGARGATGPAGPPGATGAKGHPGLPGTPGPAGLAAKGIPGPQGPPGLPG
SDGADGEPGPAGPPGPPGPPGEVIIAETKGTFVSEPFMKSPMSAFSALTTTPYPPAGSPI
KFDHIIYNGENHYDPETGIFTCQVPGVYYFSYSMHVNGANALVALYKNENPIMFTYDEYN
KGFLDQMSGSSVLQLNEQDTVYVQIHNDDANGVFAAENVHCTFSGFLIAST
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacctacgagtagcaagctttctccttctcctggtggccctggttgccggccatggc
gagagatacatggtgaagaaagtggtgaaggccccttatgccgtgaaaagtcatgtggtt
tctgtagctggagagcctggtattccaggtgagccaggtgaagctggacctccaggacct
cccggaccccctggccagaatggtgaaggacttccagggccccagggaccacctgggcag
cctggacctgctggatactcagcacctggaaagccaggcactccaggtggaccaggcaaa
ccaggtgcagatggtgcacctggacctaagggagatactggtgcacctggtcctcaggga
ccaaggggtgctcctggaccttctggcagtcctgggcctgcaggtctatcgtctactggc
aaacctggagcagctggtttgcctggatcaatgggtccannaggagagccaggtgctaag
ggacatccaggtattcctggtgccccaggacaaaaaggagacagaggtattggcattcaa
gggccagcaggtgagactggtgcaactggacctatgggacctgtaggtgcacctggtcag
cctggtgtaggtaaacccggtaaacctggctacccaggtgagccaggtaagggaggttca
cctggtcgtgatggagaacccggtcctatgggaccaactggaccaaaaggccacactgga
gctcctggagttggaatgccaggtaaaccaggtgaaaatggtgctccaggattgccaggt
cctatgggacataaaggtcctcagggagcgactggtgctcctggtgctcctggtagtcca
ggatatggtaacccaggtgcttccggttcaaagggtgatacaggtcctgtaggtagccct
ggtgcaaccggtcagaaaggtgagccaggtgcaaggggaccaacaggatacacaggtgca
actggcccagtgggtccagctggttctcagggtcccagaggtttcccaggtgagaaagga
gctacaggtgaaaagggcgaaacaggtccaattggtcctcaaggctttaagggacataag
ggagatcagggggcaccgggaggtgatggcaaacaaggatacccaggtgcaacagggcca
caaggccaaaggggacctacaggtgctccaggtagcaaaggggaaactggtgaggcaggt
gcaactggtgctccaggtgcaactggacctgttggacctaagggtcatacaggaaatact
gggccagctggtgaaacagggcctgaaggtgccccaggggcaagaggagctactggccct
gctggtccaccaggtgcaacaggagctaaaggtcaccctggtcttcctggcacacctggc
cctgcaggtcttgctgctaaaggaattcctggacctcaaggtccaccaggacttcctgga
tcagatggtgccgatggtgaacctggaccagctggccctcctggcccacctggtcctcct
ggtgaggttattattgcagaaacaaagggaacttttgtcagtgagccttttatgaagtcc
ccaatgtctgcctttagtgccttaactacaacaccttatcccccagctggtagccctatt
aaatttgaccatattatctacaatggtgagaatcattatgatcctgagacaggcatcttt
acctgccaggttcctggagtgtattacttctcatacagcatgcacgtaaatggagctaat
gcgttggtggcactgtacaaaaatgaaaacccaattatgttcacttatgatgagtacaac
aagggcttcctggatcagatgtctggtagttctgtccttcagcttaatgagcaggacact
gtttatgtccagatccataatgatgatgcaaatggtgtctttgctgctgaaaatgtccac
tgcactttcagtggtttcttgattgcttccacgtga
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