Silurus meridionalis (southern catfish): 124390474
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Entry
124390474 CDS
T08004
Symbol
nfkbiab
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b
KO
K04734
NF-kappa-B inhibitor alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04210
Apoptosis
smeo04620
Toll-like receptor signaling pathway
smeo04621
NOD-like receptor signaling pathway
smeo04622
RIG-I-like receptor signaling pathway
smeo04623
Cytosolic DNA-sensing pathway
smeo04625
C-type lectin receptor signaling pathway
smeo04920
Adipocytokine signaling pathway
smeo05132
Salmonella infection
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124390474 (nfkbiab)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124390474 (nfkbiab)
04621 NOD-like receptor signaling pathway
124390474 (nfkbiab)
04622 RIG-I-like receptor signaling pathway
124390474 (nfkbiab)
04623 Cytosolic DNA-sensing pathway
124390474 (nfkbiab)
04625 C-type lectin receptor signaling pathway
124390474 (nfkbiab)
09152 Endocrine system
04920 Adipocytokine signaling pathway
124390474 (nfkbiab)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124390474 (nfkbiab)
09171 Infectious disease: bacterial
05132 Salmonella infection
124390474 (nfkbiab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124390474 (nfkbiab)
04131 Membrane trafficking [BR:
smeo04131
]
124390474 (nfkbiab)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
124390474 (nfkbiab)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
124390474 (nfkbiab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
124390474
NCBI-ProteinID:
XP_046712386
LinkDB
All DBs
Position
8:514873..518155
Genome browser
AA seq
380 aa
AA seq
DB search
MNKVLCRAELEIPHPDPERLLYARGRLNNSSTRAEQLRSDRTSHTHTSLHLSLSIFLLLS
SKMSLYRNIVGTSAMDYSSDGRAHKAGTAVDERLDSGLDSLREDEAEDYCESAREEPVSD
EFARLSVEEERWRTEITEDGDTYLHLAVIHEAQDMALKMIEMSIKHPFLNQQNYQRQTAL
HLAVITEQPLVVERLLKAGCNPTVVDNNGNTALHIACGKGSLTCFGLLTQNCSAFLPSIL
QTPNYNGQKCLHVVALHGFLSMVESLICFGADINEQEQCNGRTALHLAVDLQNLELVKLL
ISKGADVNSLTYGGYSAYHLTHGRQNADIQKALHDVTDQSLRDLPESESEDSDDEYVYDY
DSYELHSDEEYDDIKVMGQE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagttctctgcagggctgagctggaaatcccccacccggacccggagcgcctc
ctctacgcacgcggaaggttaaacaactcctccacccgagcggagcagctcagatcagat
cgcacttctcacacacacacatctctccatctctctctctctatctttctcttgctctcc
tcgaaaatgtctctttatcggaatattgtcggcacgagcgcgatggattacagttcggac
gggcgcgcgcacaaggctgggacggcggtcgacgagcgtctagacagcgggctggactcc
ctgcgcgaggacgaggccgaggattactgcgagagcgcgcgcgaggagcccgtgagcgac
gagttcgcgaggctgagtgtggaagaggagcgctggaggaccgagatcacggaagacgga
gacacatatttacatctggctgtcattcatgaagcccaagacatggcgctgaaaatgatc
gagatgtccatcaagcacccattcctcaaccaacagaactaccagagacagacggcgctg
cacttggccgtgatcacagagcagccactggtggtggagcgtctgctcaaggccggctgc
aaccccacagtagtggataacaacggcaacacggcactgcacatcgcctgcgggaaagga
tcgctcacgtgtttcgggctgctcacccaaaactgctcggcattcctgccttccattctg
cagacaccaaactacaacggtcagaaatgcttacacgtggtggctttacacggatttctc
tcgatggtggaaagcctcatctgttttggtgcagatattaatgaacaggagcagtgtaac
ggaaggacggctcttcacttagctgtggacctgcaaaacctcgagctggtgaagcttctg
attagtaaaggtgcagatgtgaacagcttgacgtacggtggttactctgcatatcatctc
acgcacggacgccagaacgccgacatccagaaggcgctgcacgacgtcacggatcagagc
ctgagggacctgcccgagagcgagagcgaggacagtgacgatgaatacgtatacgactac
gacagctacgagctgcactctgatgaagagtatgatgacattaaagtgatggggcaggag
taa
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