Silurus meridionalis (southern catfish): 124392206
Help
Entry
124392206 CDS
T08004
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124392206 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124392206 (lamb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Utp12
Motif
Other DBs
NCBI-GeneID:
124392206
NCBI-ProteinID:
XP_046714925
LinkDB
All DBs
Position
10:complement(10111392..10130015)
Genome browser
AA seq
1848 aa
AA seq
DB search
MDLIYLISKAKMWISAVLLVFLLVPAHLQEECKGSSCHPTLGDLMVGRAAQLSASSTCGL
KRPQNYCILGYLEDEQKCFTCDSRSPYNRYNNPTSHQIENIITTFELERKMKWWQSENGV
HHVSIQLDLETMFQFSHLVMTFKSFRPAAMLVERSKDFGHTWKVYRYFSDDCVTNFPGIS
EGPAETIDDLICDSRYSGAEPSTDGEVVLKALDPNFDIENPFDPAIQELITMTNLRVNFT
RLLTLGDDLLGRKRRHPQEKYYYALYDMVVRGSCFCNGHASQCMPVYNTRGDTLNEPGMV
HGRCVCQHNTMGNNCEKCQDFYNDSPWRPAGSTDPHVCKRCNCNGHSERCHFDQQRYIAT
GQVSGGVCDDCRNNRMGAQCELCKPHYYKDPLRSQNDPHGCIPCTCHSDGSVDGGLCDPV
SGQCVCKQNVEGEHCDRCKIGYYSLSQDNPKGCQSCMCNFLGTINTSPCDQNTGQCNCNH
LAQGPECDQCIPGYWGLGNTVYDCLPCDCDIGGAFTTLCISDNGQCQCRANMVGRRCSEP
EPGYFLAPIDFYLYEAESAVPLDTKCFSDLVVPPLYPTPSRPLPYCPPGSKAREPTPPPY
YEPEPTVQETYDPYTSEPSVYENVWPPVAYQTLPPAVTLPSCVNYFKSRGYDVEFRDGRF
VAVKREGRRKRRQGQSTISLQPGFLHQVILRPHTPDELITWTGPGVVRVQDGAGLRFIIT
NIPLTLNYHLVVRYELENTDGWTATIKIVPLGSPDENCPFDPSEKTFMLPITSRAAMLDP
SVCLSSGVRYYVDITFENPDPYCSSHILIDSMGLIPKMESLPNFCSDADLAQYQQYRCVE
LGAQVGEHTLPEVCEKLVASMSAYIHNGAIPCRCNHVGSLSSACSKFNGQCNCKPNVVGR
CCDTCAPLTYGFGQNGCSPCNCEPLGSKAEFCDHKTGQCQCHNGVTGRQCDRCLPGYYSF
PNCKPCQCNGLADHCDDSGVCLNCRGHSAGSHCERCVEGYFGDPVLRQPCKTCMCPGIIG
SGRFFADSCRGDTNSITVACQCKTGHQGLRCDKCAPGYYGNLLLPGANCKECPCNNNIDP
SDGEACDPITGECLRCLRNTFGPQCQTCKPGYHGNALLQDCRECSCDQQGTDISKCPLGG
PCICDEVTGQCPCRRGVVGIRCDRCEDGYWNMSGISGCQPCNCHTGHSVNNLCDKITGQC
PCETGYGGKQCMECAANHFGNPDIQCISCDCEMQGSIYPGCDPDTGECLCRAGVSGNFCE
KCAPGYDPIFPMCEPCHPCYHQWEKNATDITQAMEIMQSVLSKHGGNLLHSDKRHQEKIQ
KLNEKLRSLVSMLGNDQVGLKSIANFLNQIRNLTETTDPNTIIIDPSNLLESEIDNIHHE
FKRLLDDLQKKIKDSQKVDLGEITDALEKIRNLHNDFLKDEERVKKARNNIDASRQTRQD
TKKELAKCQLRPLDVLERKVKELSVTKLNEEICGAPSDAECEKAVCGGALCGKCGGPSCT
GSLPVALNATETAKKIKAGIRSLLQNLTGADTKINDIKNINNDVKNKAQNMMNKIIKSKN
KFEKAKNDTKKLIESVREYLRAEAMEPDDIDKVASAVLDIKLPSSPDEIKKMIEDIQKMM
KNFTHITEDLKDLEDKAKLAEDLKNKANEILNRTKDTDVGYIEKVLNDTAKLQDKIKQKL
NESEDNINATTELLDQTGVKLKNVEEDLGTPRTKTLEEQIEALKNKTEMNRAQALEAKIA
ADAALANVTEANKDLGDVEEQLEKLKNISQGLNDTRTEHLKKIKKEAENMAKDVESKMNQ
IEVLEKRIQNAVLHKMNKIKELEVLLAEAMSLKEYIAEKADNYSQCGT
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggatctgatctatttaatttccaaagcaaaaatgtggatatctgcagtgctgcttgtt
tttctgttggtgccagctcacttacaggaagaatgtaaggggagctcgtgtcaccccacc
ctaggtgatcttatggtgggccgtgctgctcaactctccgcctcatccacatgtggccta
aaaaggccccaaaactattgtatcctgggatatctggaggatgaacagaaatgtttcacc
tgtgactcaaggagcccctacaatcgatacaacaaccctactagccatcaaattgaaaat
atcattaccacctttgagctagagcgtaagatgaaatggtggcagtctgagaacggtgtg
catcatgtcagcattcaactagacttggagactatgtttcagtttagccacttagtcatg
acattcaagagtttcagacctgctgcaatgctggtggagaggtcaaaggattttggtcac
acttggaaggtgtatcgatacttttctgatgactgtgttaccaacttcccaggaatctca
gaaggccccgcagaaactatagatgatcttatttgtgacagccgctactctggagctgag
ccttctactgatggcgaagtggtgttaaaggctttggaccctaactttgatattgaaaat
ccattcgaccctgccattcaagagctcatcaccatgactaacctgcgagtgaactttaca
cgtttgctcacactgggtgatgacttgttggggaggaaaaggaggcacccacaggagaaa
tactactatgccctctatgatatggtggtcagagggagctgtttttgcaatggccacgcc
agccaatgtatgcctgtttacaacacacgtggagataccctgaatgaacctggcatggtt
cacggtcgatgtgtgtgtcaacataacactatgggaaacaactgtgaaaagtgccaggat
ttttacaatgactccccctggaggccagctgggagcactgacccacatgtttgcaaaagg
tgcaattgcaatggccactctgagcgatgtcactttgaccaacagcgctacatagccact
ggacaggtcagtggtggtgtgtgtgatgactgtagaaataaccgcatgggcgctcagtgt
gagctctgcaaaccacactattacaaggaccccctgcgttctcaaaatgatccgcatggc
tgcataccttgcacctgccactctgacgggtctgtggatggtgggctgtgtgatccagtg
agtggtcagtgtgtgtgtaaacagaatgtagagggtgaacactgtgaccgatgcaagatt
ggatactatagtctcagccaggataaccccaagggctgtcagagttgtatgtgtaacttc
ttgggcactataaacacctccccatgtgaccagaacacaggacaatgtaattgtaaccac
ttggcccaaggaccagaatgtgaccagtgtataccaggctactggggactaggaaataca
gtttatgactgtctaccttgtgactgcgacatcggaggagctttcactactctgtgtatc
tcagacaatggccagtgtcaatgcagagccaatatggtgggacgtcgctgtagcgaacct
gaacctggttacttcctggcccccattgatttttatctctatgaggctgaaagtgctgtt
cctctggacaccaaatgcttctctgacctggttgtacctcccctgtatcctactccatct
cgtccacttccctactgtcccccaggatcaaaggctcgtgagcctacaccgccaccttat
tacgaacctgagcctacagtgcaggagacatatgacccctacacctctgaaccttccgtt
tatgagaatgtttggcctcctgtagcatatcagactttacctcctgctgtcactctaccg
agctgtgtgaactacttcaaaagcagaggctatgatgtagaattcagggatgggagattt
gtagcggttaagcgtgagggccgtcgaaaacgaagacaaggccagagtaccatttccctg
caaccaggattcctccatcaggtcatcctacgaccacataccccagatgaacttattact
tggactggaccaggagtggtgcgggttcaagatggagcaggactccgattcattatcacc
aacatcccactgactcttaactatcatcttgttgttcggtatgagctggagaacacagat
ggatggacagccacaataaaaattgtgccattaggatctcctgatgaaaactgtccattt
gatccatcagagaaaacctttatgcttcctatcactagcagggcagccatgttggatcct
tctgtatgtctcagttctggtgtgaggtactatgtggatatcacttttgaaaatccagac
ccttattgcagctcacatattctaatcgactctatgggacttattccaaagatggagtct
ctgccaaatttctgctctgatgcagacctggctcagtaccagcagtatcgctgtgtggaa
ttgggtgcacaggtaggagaacataccctacctgaggtgtgtgaaaaactggtagccagc
atgtcagcatacatccacaatggtgcaattccttgtagatgcaatcatgtgggatcactt
agctcagcctgtagtaaatttaacggacaatgcaactgcaaacccaatgtggttggccgc
tgttgcgacacctgtgctcctttgacctatgggtttggacaaaatggctgctcaccatgt
aactgtgagccactcggttccaaagctgagttctgtgaccataaaactggacagtgccaa
tgccataatggagtcacaggtagacaatgtgataggtgtctgcctggatattatagtttt
cctaactgcaaaccttgtcagtgtaatgggctggctgaccactgtgatgactctggagtg
tgtctaaactgcagggggcattcagctggatcccactgtgaaaggtgtgttgaaggttac
tttggcgatccagtactaaggcaaccctgcaagacatgcatgtgtccaggcataataggc
agtggtcgtttctttgctgactcctgcagaggggacacaaattcaataaccgtggcctgt
caatgcaagacggggcatcaaggcttacgctgtgataagtgtgcacctggttactacggt
aacctgcttttaccaggcgctaattgtaaagaatgcccctgcaacaacaacattgatccc
agtgatggcgaggcatgtgatcctataactggagagtgtcttcgctgcttgcgtaacacc
tttgggcctcagtgccagacctgtaagccaggatatcatgggaatgcactgctccaggac
tgcagagaatgctcatgtgaccagcaaggcacagacatatctaaatgcccactgggcggc
ccctgcatttgtgatgaggtgaccgggcagtgcccatgtcgtcgtggtgtggtaggcatt
cggtgtgatcgctgtgaggatggatactggaatatgagtggaatttcagggtgtcagccc
tgtaactgtcacacaggccattctgtcaataatctttgtgacaagattactgggcagtgt
ccttgtgaaacaggatatggtggtaaacagtgcatggagtgtgcagccaatcattttgga
aaccctgacattcagtgcatttcctgtgactgtgaaatgcagggctctatttacccaggc
tgtgatcctgacactggtgaatgtctgtgtcgggctggagtaagtggcaatttctgtgaa
aagtgtgccccaggatatgatccaatcttccctatgtgcgagccatgccacccttgttac
catcaatgggaaaaaaatgccacagacattacacaggctatggaaatcatgcagtcggtg
ctctcgaaacatggtggaaatctgttacatagcgacaagcgacaccaagaaaaaatacaa
aagttaaatgagaagcttaggagcctggttagcatgctaggcaatgaccaggttggcctg
aaaagcatagcgaatttcctgaatcaaatcaggaacttaacagagaccactgatccaaac
acaataattattgatccatctaatttgctggaaagtgaaattgataacattcatcatgag
ttcaagaggctactggatgatctgcaaaagaaaattaaagactcccaaaaagtagatcta
ggagagataacggatgcactggagaaaatccgtaatctccataatgacttcctgaaagat
gaagaacgggtgaagaaggcaagaaataatatagatgcttccaggcagacccgacaggac
acaaaaaaagaactggctaaatgccagttgaggcccttggatgtactggagaggaaggtc
aaagagctcagtgtgaccaaacttaatgaggagatttgtggtgcaccaagtgatgcagag
tgtgaaaaggctgtgtgtggtggtgctttgtgtgggaagtgtggcggaccatcgtgtaca
ggaagtcttcctgttgccctcaacgctacagaaacagcaaagaagatcaaagcaggcatt
cgaagcctcctccaaaatctgactggagcggatacaaagatcaatgacatcaaaaatata
aataacgatgtgaaaaacaaagcccagaacatgatgaataaaatcatcaagagtaagaac
aagtttgaaaaggccaagaatgacactaaaaaactcatagaaagtgtcagggagtacctc
agagccgaggcaatggaaccggacgacattgataaggtagcctctgccgtgttggatatt
aagcttcccagttctccagatgagatcaagaagatgattgaggatattcagaaaatgatg
aaaaacttcacacacattacagaagacctgaaggacttggaggataaggccaaattagcc
gaggacttaaaaaacaaggctaatgaaatcctgaacagaactaaggacacagatgttgga
tacatagaaaaagtcctgaatgatactgccaaactccaagacaagataaaacagaagctg
aatgaatccgaagacaacataaatgctaccactgaattacttgaccagactggtgtaaaa
ctaaagaatgttgaagaagatttaggcacgcctaggacaaaaacacttgaagaacaaatt
gaggctctgaaaaataaaacagaaatgaatagagctcaggcattggaggcaaaaattgca
gctgatgcagcattagccaatgttacagaggctaacaaggatcttggagatgtagaggag
cagttagaaaaactgaaaaacatctctcagggactaaatgatacaagaactgagcacctg
aagaaaataaaaaaggaggctgaaaacatggcgaaagatgttgaatctaaaatgaatcaa
attgaagtcttggagaaaaggattcaaaatgcagtactacataaaatgaataaaatcaaa
gaattggaagttctgttggcagaagcgatgagcttgaaagaatatattgctgagaaagcg
gacaattattcgcagtgtggcacctaa
DBGET
integrated database retrieval system
