Silurus meridionalis (southern catfish): 124393330
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Entry
124393330 CDS
T08004
Name
(RefSeq) protocadherin beta-16-like
Organism
smeo
Silurus meridionalis (southern catfish)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
He_PIG
MIG-14_Wnt-bd
RibLong
Motif
Other DBs
NCBI-GeneID:
124393330
NCBI-ProteinID:
XP_046717031
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Position
11:complement(5487678..5575762)
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AA seq
806 aa
AA seq
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MRMVNIITSFSILCSLAWVCNIICAVRADLSYTFPEERKQQYVIGNIAKDLGLDIKRLSA
RKARIETEGSTKRYCEINVSNGNLVVAETIDREELCGSKISCILNYELVLENPLDVHRIS
LEIEDVNDNAPRFTKKRITFNIMESADKGERFPLDEAHDSDIGQNAVQGYSLERNAHFIL
SVKENADGGKYAELILDKELDREQTKEIDLIFTAIDGGTPQRSGTALIHINVLDVNDNTP
VFSQSVYKVTLAENSPLGSEVITVSATDADEGVNGEVSYELSRISDKAAKIFSIDKTTGH
ITVGGNIDYEEETSYEIRVQAIDGSGLASTAKLIIDITDVNDNAPRIILKSLNSQISENS
SIRSEVAIINVQDNDSGDNQKVRCSIQENVPFQMNPSIKNYFSIVTTSLLDREKTSDYNI
TIIATDGGSPPLSTSITFHLSVSDINDNPPVFEQLSYTAYVTENNKPGTSISAVIARDPD
WRQNGTVLYSLVPSEIHGVPLSSFVSINSDTGVIHAVRAFDYEKFRDFKVLVSARDNGSP
PLSSNVTVSVFISDENDNAPQILYPAPDGKTLMTEMVPKATHSGSLLSKVIAVDADSGQN
AWLSYQIIKSTDPGLFTIGLHSGEIRTQRDIIESDSMKQNLVISVKDNGQPPLSATCSVY
LLISDNLAEVPELKDMTYEESNSKLTFYLIIALVSVSTFFLTFIILILAVRFCHRRKPRL
LFDGAVAIPSAYLPPNYAEVEGAGTLRSSYNYDTYLTTGSRTSDFKFITSYNDATLTAGE
TLKNVKNETLSASLITLNNAGEENED
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggtaaatataataacttcattttcgatattatgttccttggcttgggtatgc
aacattatttgcgctgtacgcgcagatttgagctacacctttccggaagaaaggaagcaa
caatatgtgatcggaaatatagcaaaggatctcggacttgacataaaacgattgtctgct
cgtaaagctcgaatagagacagaaggcagcactaaacggtactgcgaaattaatgtgagt
aatggaaatttggttgtggcggaaacaatagaccgagaggagctctgtgggtcgaaaatt
tcttgcattcttaattatgagcttgtgttggaaaatcctcttgatgtgcatcgcatttca
ctggagattgaggatgtaaacgacaacgcgccgagatttaccaaaaaaaggattacgttt
aatataatggaatcggccgataaaggagaacgtttccctttggatgaagctcacgactct
gacataggccaaaacgcggttcagggatattcacttgaaagaaatgctcattttattttg
tcagttaaagaaaacgcggacggaggaaaatacgctgaactcattttggataaagagctg
gatcgtgaacagacgaaggaaatagatttaatatttactgcgattgatggagggactcca
cagaggtctggtactgctcttatccatatcaatgttcttgatgttaatgacaataccccg
gtttttagtcagtctgtgtataaggttactctggctgaaaactcaccgttgggttcagaa
gtaattacagtgagcgctacagacgctgatgagggagtgaacggggaggtcagttatgaa
ttgagtcgaatatctgataaagcagcaaaaatattttctattgacaagacaactggtcat
attacagtaggcggaaacattgattatgaagaagaaacctcatatgaaataagagtgcag
gccatcgatggttctggtttagcatccactgcaaaattaattatagacattactgatgta
aatgataacgcacccagaattattcttaaatctctgaatagtcaaatatctgagaacagt
agcataagatcagaggtggctataattaatgttcaggataacgattcaggagataatcaa
aaagtccgatgttccattcaagaaaatgttcctttccaaatgaacccatctattaaaaac
tatttttctatagttaccacaagcttattagacagagagaagacatccgattataatata
accatcattgctactgatggaggctctccacctttatcaacatccataaccttccatcta
tctgtatctgacatcaatgacaatccaccggtctttgagcagctgtcatacactgcatat
gtaacagaaaacaataaaccaggaacatctattagtgctgttattgcaagagatccagac
tggaggcagaatggtacagtactgtattctctggtgcccagtgagatacatggagttcca
ctgtcatcatttgtatccattaattcagatactggagtgatccatgctgtgagggcattt
gattatgaaaaattcagagactttaaagtcctggtttcagccagagacaatggttctcct
ccactcagcagcaatgtgactgtgagtgtgttcatatcggatgagaatgataatgcacca
cagattttatatcctgctccagatggaaagactttaatgaccgagatggtccctaaagct
actcattctggatctctgctttccaaagtgatcgctgtggatgctgactctggacaaaat
gcatggttgtcatatcagatcatcaaatctactgatccaggacttttcactattggtctc
catagtggtgagatcaggactcagagggacattattgaatctgacagcatgaaacagaat
cttgttatctcagtgaaagacaatggacaacctcctctttctgctacgtgttctgtatat
ttacttatttctgataatcttgctgaagttccagaactgaaagacatgacctatgaggag
agcaattccaaactgactttctatttgatcatcgctctggtttcggtctccaccttcttc
ctgactttcattattctgatcctggctgtgaggttttgccacaggagaaaacccagactg
ttgtttgatggagcagtggccattcccagtgcatatctccctcccaactatgcagaagtg
gagggagctggaactctccgcagttcttacaattatgacacgtatttaactacagggtca
cgcaccagtgacttcaagttcatcacatcttacaatgacgccacacttactgctggagaa
actctgaagaacgttaaaaatgagactttatctgcaagtttgattacacttaacaatgca
ggagaggaaaatgaggactaa
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