Silurus meridionalis (southern catfish): 124396243
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Entry
124396243 CDS
T08004
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124396243 (irf2bp1)
04121 Ubiquitin system [BR:
smeo04121
]
124396243 (irf2bp1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124396243 (irf2bp1)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Atypical E3
124396243 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
124396243
NCBI-ProteinID:
XP_046721297
LinkDB
All DBs
Position
13:19185041..19188633
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AA seq
598 aa
AA seq
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MSSSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIEMLIDTARQLK
RTHVMQDGRSPGPQSGGKHGPGAKDAALDGSRNTERFERSRGEFVPARLPNGLPRLEDGA
VAEVSRQSPNARRTMVAGVPPNLMAQGIVGTPHGLLIGARSSGAPLALSAPILSELGKRQ
AMGVGMSFVTSDFEKDLKEKQRNAEALAELSESVRNRADDWAGRPKSVRDTLLALSSCVP
FNVRFKKDHGLVGRVFAFDAKLGVDFELKVFVEYPCGSGNVFSSLLALVKQMFQDSQKDS
GKVISSGFKYVEYEKRHGVGDWRLLSELLSDGLRVFKEPPIPDSLPQPYLDAACAMLPTA
LCHLGRPGQARMRRRKASPDPDAAERLTAEDQIRQHWYPSMSSHIPTSSLASAMPGQPPN
LQEIVPVSHGSDPSPISALMTVADNVGAISQSPKDMPGSSGAHGSSASPSSSGQRRLASR
NGENGSGIAAVATAMPPVAVAEQVSEISGASGAPLCCTICHERLEDTHFVQCPSVPVHKF
CFPCTREFIRNQGSGSEVYCPSGDKCPLVGSNVPWAFMQGEISTILAGDVKVKKERDP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcttcctcctcgcaggcatcttccaggcggcaatggtgttatctttgcgac
ttgcccaagatgccctgggccatgatatgggattttagtgaagcggtgtgtcgcgggtgt
gtgaattatgaaggcgcggacaggatagaaatgctaatagatacggcgagacagctgaaa
cgcacccatgtgatgcaggacggaaggtctccaggtccccagtcggggggtaaacacggc
cctggggcgaaagatgccgcgctggatgggagcagaaacactgagcggtttgaaaggagc
agaggagaatttgtacctgccagactccctaatggactgcccaggctggaagatggtgct
gttgcagaggtgagcaggcaaagtcctaatgccagaaggacgatggtggcaggtgtgcca
cccaatttgatggcccagggaattgtaggtacaccgcatggccttttgatcggtgccaga
tccagcggtgcacctctggctttatctgcaccaatactgagcgaacttgggaaaagacag
gcaatgggtgtcgggatgtcgttcgtgacctcagactttgaaaaggacctgaaggagaaa
caacggaatgccgaagccctcgcagaactttccgaaagtgttcggaaccgggccgatgat
tgggccggacgtcccaaatctgtccgtgacactttgcttgcgctttccagctgtgtgcca
ttcaatgtgcgctttaagaaagaccacggccttgtcgggagagtgtttgcatttgatgcc
aagcttggggtggattttgagctcaaggtgtttgttgagtacccgtgtggctcgggcaat
gttttctcgagcttgttggctttggtgaagcagatgttccaggatagccaaaaagactca
ggcaaagtgatcagctccggctttaaatacgttgaatacgagaaacgacacggtgttggt
gattggcgtctcctttccgagctgctcagcgatggtcttcgggtatttaaagaaccaccg
atacctgattcactccctcaaccttatttggatgctgcctgtgccatgttgcccactgct
ctctgccatctcggacgtcctggccaagctcgaatgcggcgccggaaagcttctccagat
ccggatgcggctgagagattgacagctgaggatcaaatacgtcaacattggtaccccagc
atgagcagccacattcccaccagttctcttgcgagtgctatgcctggccagcctccaaat
ctccaggaaatagttcctgtttcccatgggagtgatccttcacctatcagcgccctcatg
actgttgcagacaatgttggtgccattagccaatcgccaaaagacatgccgggaagtagt
ggtgctcacggttctagcgctagcccttcatcatccgggcaaaggcgactcgcatcacgt
aacggtgaaaacggatccggaatagctgcggttgccacggcaatgccccctgttgcagtg
gcagagcaggtatctgaaatctctggagcatctggagctcctttatgttgcaccatttgc
catgaaaggcttgaggatacacactttgtccagtgcccttcggtacccgtgcacaagttc
tgcttcccctgtaccagggaattcatccgtaatcagggctcagggagtgaggtgtactgc
ccaagcggtgataaatgcccgcttgtgggctccaatgtaccctgggcattcatgcaaggg
gagatctcaaccatcctggctggagatgtgaaagtcaagaaggagcgggacccttaa
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