KEGG   Silurus meridionalis (southern catfish): 124397057
Entry
124397057         CDS       T08004                                 
Symbol
ntn1b
Name
(RefSeq) netrin-1b
  KO
K06843  netrin 1
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:smeo00536]
    124397057 (ntn1b)
Glycosaminoglycan binding proteins [BR:smeo00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   124397057 (ntn1b)
SSDB
Motif
Pfam: Laminin_N NTR Laminin_EGF BNR_6
Other DBs
NCBI-GeneID: 124397057
NCBI-ProteinID: XP_046722467
LinkDB
Position
14:12443458..12487125
AA seq 652 aa
MRARARSRSVRSLKARAETQNFSVFLATGGAFGATRTREGRGTMLRLFVAWSTLVTLCVM
VEGARGGGGGGGGGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVNAAFGKDVRASSTC
GSPAARYCVVSEKGDERTRDCHTCDATDPKKAHPAAYLTDLNNPHNLTCWQSESYVQHPQ
NVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWTPFQFYSTQCKKMYNRPSR
AAITKQNEQEAICTDSHTDMQPLAGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKVT
FSRLHTFGDENEDDSELARDSYFYSVSDLQVGGRCKCNGHASKCVRDRDGNLVCECKHNT
AGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLN
CRHNTAGRHCHYCKEGYYRDMTKPISHRRACKACDCHPVGAAGKTCNQTTGQCPCKDGVT
GITCNRCAKGYQQSRSPIAPCIKIPVASPTATYTSSEEPSDCEAHCKASKGKMKVTMKKY
CKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGEHRIRRGDQLLWVRAKDVACKCPKIK
PGRKYLLLGSDDEDSRGQSGVVADKASLLVPWKDQWARRLRKFQQRDKRGKC
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgcgcgcccgcgcaaggagtcgatctgtgcggagtctgaaagcgcgcgcggagacgcaa
aacttctcggttttcttggcaaccggcggtgcgttcggggcaacgcgaactcgtgaggga
cgagggacgatgctgcggctgttcgtggcgtggagcactctggtgacgctgtgcgtgatg
gtggagggagcgcgcggcggcggcggtggcggcggcggtggcggttacggcatgagcatg
ttcgccgcgcagtcctcgccgcctgacccgtgctacgacgagaacggcaacccgcgccgc
tgcatccccgacttcgtgaacgcggctttcggcaaggacgtgcgcgcgtccagcacgtgc
ggcagcccggcggcgcgctactgcgtggtgagcgagaaaggcgacgagcggacgcgcgac
tgccacacgtgcgatgcgaccgacccgaagaaggcgcatccggccgcgtacctcaccgac
ctcaacaacccgcacaacctcacgtgttggcagtccgagagctacgtgcagcacccgcag
aacgtcaccctcacgctctcgctgggcaaaaagttcgaggtgacctacgtgagcctgcag
ttctgctcgccgcggcccgagtccatggccatctacaagtcgatggactacggcaagaca
tggacgccgttccagttctactcgacgcagtgcaagaagatgtacaaccggccgagtcgc
gcggccatcaccaagcagaacgagcaggaggccatctgcaccgactcgcacacggacatg
cagccgctcgccggcgggctcatcgccttcagcactctggacggacgaccgtcggcgcac
gacttcgacaattcccccgtgctgcaggactgggtcacggccactgacatcaaggtgact
ttcagccgcttgcacacgtttggcgacgagaacgaggacgactcggagctggcccgggac
tcgtacttctactccgtgtccgatctgcaggtagggggccgctgcaagtgcaacggacac
gcgtcgaagtgtgtgcgcgaccgcgacggcaacctggtgtgtgagtgcaaacacaacacc
gcgggaccggagtgcgacaggtgcaaacccttccactatgaccggccctggcagcgcgca
acagccagagaagccaacgagtgcgtcgcttgtcactgtaatctacacgcacgccgctgt
cggttcaacatggagctctataagctgtcaggacgcaggagcggaggagtttgcctcaac
tgccgacacaacactgccggtcgccactgtcactactgcaaagaaggctactacagagac
atgaccaagcccatctcacaccgacgcgcctgcaaagcatgtgactgtcacccagtcggt
gctgcaggtaagacctgtaaccagaccacaggccagtgtccatgcaaggacggagtgact
ggtattacctgcaatcgctgtgctaaaggctaccagcaaagtcgctcacccatcgccccc
tgcatcaagattccggttgcatcccccactgcaacgtacaccagttcggaggaaccatca
gattgtgaagcccactgcaaggcctccaaaggcaaaatgaaggtcaccatgaagaagtat
tgcaagaaggactttgctgtccaagtgcacgtgctaaagggtgacaaggcaggcgagtgg
tggaagttcaccattaacatcatctcggtgtacaagcaaggagagcaccgcatccgacgc
ggcgaccagctgctgtgggtgcgtgccaaggacgtggcctgcaagtgccctaagattaag
ccgggcaggaagtacttgttgctgggctcagacgacgaggactcgcgcggccaaagcggt
gtcgtggcagacaaggccagcctgctcgtcccctggaaggaccagtgggcccgtcgtctc
cgcaagttccagcagcgagacaaaaggggcaagtgctaa

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