Silurus meridionalis (southern catfish): 124397266
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Entry
124397266 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
smeo04010
MAPK signaling pathway
smeo04141
Protein processing in endoplasmic reticulum
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124397266
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124397266
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124397266
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124397266
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124397266
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124397266
03009 Ribosome biogenesis [BR:
smeo03009
]
124397266
03110 Chaperones and folding catalysts [BR:
smeo03110
]
124397266
04131 Membrane trafficking [BR:
smeo04131
]
124397266
03051 Proteasome [BR:
smeo03051
]
124397266
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124397266
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124397266
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
124397266
Spliceosome [BR:
smeo03041
]
Complex B
Other components
Prp19 complex
124397266
Complex C
Prp19-CDC5 complex
124397266
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124397266
Chaperones and folding catalysts [BR:
smeo03110
]
Heat shock proteins
HSP70 / DNAK
124397266
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
124397266
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
124397266
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
124397266
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
124397266
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124397266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Hydantoinase_A
MIF4G
Pox_D5
Motif
Other DBs
NCBI-GeneID:
124397266
NCBI-ProteinID:
XP_046722755
LinkDB
All DBs
Position
14:complement(5902663..5905363)
Genome browser
AA seq
643 aa
AA seq
DB search
MSSAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRKFDDPIVQSDMKHWPFQVISDGGKPKVQVEYKGETKSFYPEE
ISSMVLVKMKEIAEAYLGQKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKKGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRLV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLYEGTDFYTSIT
RARFEEMCSDLFRGTLEPVEKALRDAKMDKSQVHEIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSGNVQDLLLLDVAPLSLGIETAGGVMTTLIKRNT
TIPTKQTQIFSTYADNQPGVLIQVFEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQEADQYKAEDDLQREKIAA
KNSLESYAFNXENSVEDENMKAKISEEDKKKVIERCNQAISWLENNQLAEKEEFEHELKE
LEKVCNPIITKLYQGGMPAGSCGAQARSASGTNSQGPTIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgctaaaggaattgctattggaattgacctgggcaccacctactcctgtgtg
ggggtgtttcagcatggaaaggtggagatcattgctaatgaccagggaaacagaacaaca
cccagctacgtggccttcacagacacagagaggctcattggagatgctgcgaaaaaccaa
gtggccatgaaccccaacaacacggtgtttgacgccaagcggctgatcggcaggaagttc
gacgatccgatcgtacagtctgacatgaagcattggcctttccaagtgatcagcgatgga
ggaaagccaaaggttcaagtggagtacaaaggggagacaaagtccttttaccctgaagag
atctcctccatggttctggtgaaaatgaaggaaatcgcagaagcttaccttggacagaag
gtaacaaatgctgtcattactgttcctgcctacttcaatgactctcagagacaggccact
aaagatgctggagtgattgctggactgaacgtactgaggatcatcaacgagccaacagct
gcagcgatcgcctacggcctggacaaaggcaagaaaggagagcgcaacgtcctgatcttt
gacctaggaggtggtactttcgatgtttcgatcctgaccattgaagatggcatctttgaa
gtgaagtccacagcaggagacactcacctgggtggagaggactttgacaaccgcctggtc
aaccactttgtggaggaattcaagaggaagcacaagaaagacatcagccagaacaagcga
gccctgaggaggctgcgtacagcctgtgagagagccaagagaaccctctcctccagctca
caagccagcattgaaatcgactccctgtatgagggcactgacttttacacttccatcacc
agagcacgctttgaagagatgtgttcggacctgttcagaggaacactagagccggtggag
aaagccctgagagatgccaagatggacaaatcccaggtccatgaaattgtcctggttgga
gggtctacaagaatccccaaaatccagaaactcctgcaggacttctttaacggacgggaa
ctgaacaaaagcatcaacccagacgaggcggtagcttacggtgctgcagttcaggccgcc
atcctcatgggcgacacctccggaaacgtccaggacttgctgctgctggatgtggctcca
ctgtcactgggcatcgagacagcaggaggagtcatgaccactctgatcaaacgcaacacc
accatccccaccaagcagacacaaatcttcagcacctacgcagacaaccagcccggagtc
ctgatccaggtgtttgaaggtgagagagccatgaccaaagacaacaatctactcgggaag
ttcgatctgacggggatcccacctgcaccgcgtggagttcctcagattgaggtgactttt
gacatcgacgccaacggcatcctgaacgtgtctgctgtggacaaaagcaccggcaaagag
aacaagatcaccatcaccaatgacaagggcaggctgagcaaggaggagattgagaggatg
gtgcaggaagcagatcagtacaaagcagaggacgatctccagagagagaagattgcagcc
aagaactccctggagtcgtacgcctttaatnatgaaaacagcgtggaagatgaaaacatg
aaagcaaaaatcagtgaagaggacaagaagaaagtcattgagaggtgcaaccaggccatt
agctggctggagaacaaccagttggctgaaaaggaggagtttgaacatgagctgaaggaa
ctggagaaagtctgcaaccccatcatcactaagctgtaccagggaggcatgccagctgga
agctgtggagctcaggcacgatccgcttcaggaacaaactcccagggaccaactattgaa
gaagtggattaa
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