Silurus meridionalis (southern catfish): 124397533
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Entry
124397533 CDS
T08004
Symbol
vtnb
Name
(RefSeq) vitronectin b isoform X1
KO
K06251
vitronectin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124397533 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124397533 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124397533 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124397533 (vtnb)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124397533 (vtnb)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124397533 (vtnb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
DUF6520
Motif
Other DBs
NCBI-GeneID:
124397533
NCBI-ProteinID:
XP_046723016
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All DBs
Position
15:complement(21727027..21734480)
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AA seq
438 aa
AA seq
DB search
MKLLVLFLLSVATSFAAEESCVGRCQNGFDKLQKCQCDTLCKYHKSCCIDYDKTCRTKVS
RGDVFDIPEENLTSSASPSMAPTSSALITEPEGETCSGKSFDAFLQIKNGSVYAFRGEYI
FELDEKSVMPGYPKLIKDVWGISGPIDAAFTRINCQGKSYIFKGNKYWRFEGDVLDEDYP
RNISVGFENIPDDLDAAFAVPASAHHKKERVYFFKGDRYYQYEFKHQPSHEDCVRMTKSS
PSVLFTHYTDLHCNDGMDDLFALIFPDISGHHKGPRFISRDWVGIKPPIDAAMVGRLYLT
SVAYDSATHSLSQVQRTRGRSRGRGSKKSHSSFWDDLDFDYDERRFFGAQRRKKGQKKGR
GRRPSFDSVFSYDDTDYADSDLVEKKEMPVQNVYFFQKDKYYRLDLQTKRIDTMNPPYPR
SIAKYWLGCKEKDLAEKR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactggtattatttttgctctctgtggcaacatccttcgctgcagaagaatcg
tgcgttggacgttgtcagaatggctttgacaaattacagaaatgccaatgtgacactttg
tgcaagtaccacaaaagctgctgtatagattacgacaaaacttgccgaaccaaagttagt
cgtggagatgttttcgacattcctgaggagaatttgacttcttcagcaagtcccagcatg
gctccaactagctctgcattgattaccgaacctgagggagaaacctgcagtgggaaatcg
tttgatgccttcctgcagataaagaacggatcggtttatgccttcaggggtgaatacatt
tttgaactggatgagaaatcggtgatgccgggttaccccaagctcataaaggatgtttgg
ggtatttctgggcccattgatgccgcttttactcgaattaactgccaggggaagagttat
atattcaagggtaacaagtactggcgcttcgaaggcgatgtcctggatgaagactatccc
agaaatatctcagtggggttcgagaacattccggatgacttggatgccgcatttgctgtt
cctgcttcggcacaccacaaaaaggagagagtgtatttctttaaaggtgatcgttattac
cagtacgagttcaagcaccagccgtcgcacgaggattgtgtccgcatgaccaaatcctcg
ccgtccgtcctcttcactcactacactgacctgcactgtaacgacggcatggatgacctg
ttcgctttgatcttcccagacatttcaggacatcacaaaggaccacgctttatttccaga
gactgggtgggcatcaaacctcctattgatgctgcaatggtgggacggctgtacctgacc
tccgtagcttatgattctgctacacattcgctttcgcaagttcagaggacacgaggaagg
agcagaggccgaggatccaagaaaagccattcatcgttttgggatgatttggatttcgat
tatgatgagagaaggttttttggcgcacaacgacgaaagaaaggtcaaaagaagggcaga
ggtagacgtccatctttcgacagcgttttcagctatgacgacacggactacgctgattct
gacctagtggagaagaaagaaatgcctgtgcaaaatgtctacttcttccagaaagataaa
tactacagactggacctccagactaaacgcatcgacactatgaatcctccatacccgaga
tccatcgctaagtactggctgggatgtaaagagaaagatttagcagaaaaacgataa
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