Silurus meridionalis (southern catfish): 124399356
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Entry
124399356 CDS
T08004
Name
(RefSeq) intermediate filament protein ON3-like
KO
K07605
type II keratin, basic
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124399356
04147 Exosome [BR:
smeo04147
]
124399356
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124399356
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124399356
Exosomal proteins of other body fluids (saliva and urine)
124399356
Exosomal proteins of colorectal cancer cells
124399356
Exosomal proteins of bladder cancer cells
124399356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
FPP
ATG16
COG6_N
DUF5082
DUF4407
ADIP
Aminopep
DUF1451
Motif
Other DBs
NCBI-GeneID:
124399356
NCBI-ProteinID:
XP_046726184
LinkDB
All DBs
Position
16:complement(5772721..5776750)
Genome browser
AA seq
652 aa
AA seq
DB search
MSVRLQSSSKTTRVSSGSGVGAFGGGIRRSFSSQSYTAPSSSRISHGIRRFGYSGGGGYI
GGGGYSGGAGFSGGAGFSGGAGYSGGAGYSGGGGYSRGTGFSRGTGIISSSGFSLGSSAG
GFGVGYGGGHGSGLGGYSGGIGSGLGGAGPGSGFGPGGGVGVGFGGPFMQLPITAVTVNQ
SLLSPLSLDIDPNIQLVRTQEKDEIKTLNNRFASFIDKVRTLEQHNKMLETKWELLQEQT
TSHSNIDAMFENYISNLRRQLDGLGNEKIKLEGELKNMQGLVEDFKNKYEDEINKRAVAE
NEFVVLKKDVDGAYMTKVELEAKVDALQDEINFLRAVYDAELQELQGQIKDTSVIVEMDN
SRSLDLDAIVSEVRAQFEEIANRSRAEAETWYKQKFEEMQTSTSSYTDDVRNTKAELVEL
NRMITRITNEIESVKGQRGNLETQIAEAEQQGELAVKDASLRIQDLEDALHKAKQDMAHQ
VREYQELMNVKLALDIEIATYKKLLEGEETRIASGGGTATVHIQELGSGSGSGSGFGGGF
SSGFGYGGSGGLSLGGGGGGGVGGGFGHGIGSGGSGGFGHGIGSGGSGGFGLGGGSGGFG
FGGGSYGSGGFGQGSVLTLTGGVGGSSGFSLSGGSHGISMSRSSGVSSAYRH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaggttacagagcagcagcaagaccaccagggttagcagtggaagtggtgta
ggtgcctttggaggtggtatcaggagaagcttctccagccaatcctatactgcacccagc
agctccaggatcagccatggtatccgccgtttcggctatagtggaggtggtggctatatt
ggaggtgggggctacagtggaggcgctggctttagcggaggtgctggctttagcggaggt
gccggctatagcggaggtgccggctatagcggaggtggtggctatagcagaggtactggt
tttagcagaggtactggcattatttctagttcaggcttcagcctgggcagcagtgctgga
ggcttcggtgtaggttatggtggaggtcatggatctggtttaggtggctatagtggaggg
attggttcaggtttaggtggagcaggaccaggatctggattcggacctggaggaggagtt
ggggttggcttcggtggacctttcatgcaacttcctatcactgctgtcacagtcaatcaa
agtctactttctcccctttctttggacatcgaccccaacatccagctcgtccgcacacaa
gagaaagatgagatcaagactctcaacaatcgcttcgcctcttttattgacaaggtgcgt
accctggagcaacataacaagatgttggagaccaagtgggagcttcttcaggaacagacc
acatcacattctaacattgatgccatgttcgagaactatatttccaacttgcgcagacag
ctggatggccttggaaatgaaaagatcaagctggagggggagctgaagaacatgcaaggc
cttgtggaggacttcaaaaacaagtatgaagatgaaatcaacaagcgtgcagtagcagag
aatgaatttgttgttctaaagaaggatgttgatggcgcctacatgacaaaggttgagctt
gaagctaaagttgatgcacttcaggatgagatcaacttcctcagagctgtgtatgatgcg
gagctgcaggagcttcaaggacagatcaaggacacatcagttattgttgagatggacaac
agtcgtagcctggacttggacgccattgtgagtgaagtccgtgctcagtttgaggagatt
gccaatcgcagtcgggctgaagctgagacatggtacaagcagaagtttgaggagatgcag
acatctactagcagctatactgatgacgttcgaaacactaaggctgagcttgtagagctt
aaccgcatgatcacacgaatcacaaatgaaattgagtcagtcaagggacagcgtggcaac
ctggagacacagattgctgaggctgagcagcaaggtgagctggcagtaaaggatgccagt
ttacgtattcaggacctagaagatgccctgcacaaagctaagcaggacatggcccaccaa
gtgcgtgaataccaggagctcatgaatgtcaaactggccctggacattgagatcgcaaca
tacaaaaaactcctggaaggagaggagactaggattgcctctggtggtggaactgcaaca
gtccatattcaggaacttggcagtggcagtggcagtggatctggattcggcggtggcttc
agcagtggatttggctatggtggaagtggtggcctgagtctgggtggtggtggtggtggt
ggtgttggtggtggatttgggcatggtattggcagtggtggtagtggtggatttgggcat
ggtattggcagtggtggtagtggtggatttgggcttggtggtggtagtggtggatttggg
tttggtggtggcagttatggtagtggtggatttgggcagggtagtgttttgaccctgact
ggcggtgttggtggtagttctggattcagtttgagtggtggtagtcatggaatttccatg
tcacgttcctctggggtatcttccgcctaccggcactaa
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