Silurus meridionalis (southern catfish): 124401199
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Entry
124401199 CDS
T08004
Symbol
erc1b
Name
(RefSeq) LOW QUALITY PROTEIN: ELKS/Rab6-interacting/CAST family member 1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124401199 (erc1b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Others
Others
124401199 (erc1b)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124401199 (erc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
Crescentin
ATG16
Motif
Other DBs
NCBI-GeneID:
124401199
NCBI-ProteinID:
XP_046729232
LinkDB
All DBs
Position
18:3538215..3737026
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AA seq
1110 aa
AA seq
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MYGSARSVGKPEDNQSPGRSPRLPRSPRLGHRRNNSTGGAGGKTLSMENIQSLNAAYATS
GPTYLSDNDATVPVSVSDLPKSTMTLGRPGARLPYGTRATVAGSSPNIASDSIAFGDHHV
PAAMASTVPHSLRQARDNTIIDLQAQLKEVLRENELLRKEVDVKESKLSSSMNSIKTFWS
PELKKERALRKDEVSKMAVWKEQFRVVQDETQHLQMTIQALQDELRIQRDLNQLFQQDCG
GARPGEPFSAELTEENFHRLHSEHERQAKELFLLRKTLEEMELRIDTQKQTLNARDESIK
KLLEMLQSKGLSSKASEEEHERTRRLAEAEMHIHHLESLLEQRDKETCALREELHRRYEG
APDSAKTKALQTVIEMKDSKVSSLERSLRDLEEEVQILKSNGALSTEEREEEMKQMEVYR
SHSKFMKNKVEQLKEELSQSEAQAQELRKGTAELQRELSAIDQLKQDLSRKDTELLGLQT
KLETLANQFSDSKQHIDVLKESLTAKEQRAAILQTEVDALRLRLEEKEAMLNKKXKQIQE
MSEEKGTLNGEIHDLKDMLDVKERKVTVLQKKIENLQEQLKDKEKQMSSLKERVKSLQAD
TSNTDTALTTLEEALAEKERIIERVKEQRDRDEREKGEELEASKKELKELKEKLSLLQGD
LSDRETSLLDLKEHASSLASSGLKKDSKLKSLEIALEQKKEECIKLESHLKKAQTAAAEA
QANTELSERISALEQEVQRHREDAGKSQAEVDRLLEILREMENEKNDKDRKISELERQMK
DQSKKVATLKHKEQVEKNRNAQLMEEARKREDNISESSQQIKDSLKQKDERIEELEEALR
ESVQITAEREMVLAQEEAARTHAEKQMEELLGAMEKVKQELESMKAKLSSTQQSLVEKEA
HLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVALLKREKD
RLVHQLKQQTQNRMKLMADNYEDDHLKTSSNSDQSNHKPSPDQIIPPLIDLNQNRSKLKL
YIGHLTALCHERDPHILQDLAPPSAYHRSQRDAWEEELQKMSLEELESELEQCERESAEL
QEYANSVLQQIADHCPDILEQVVNALEESC
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtagcgcccggtcagtgggtaaaccagaggacaatcagagccctggtcgttct
ccacgcctgcctcgctcccctcgcctgggccaccggcgcaataacagcacaggtggtgca
gggggtaaaacgctttccatggagaacatccagtctctgaatgccgcctacgccacctcg
ggccccacttacctgagcgacaacgacgccaccgtccccgtttcggtctcggatttgccg
aagagcaccatgaccctgggacgcccgggcgcccggcttccctacggcacgcgtgccacc
gtggcgggcagcagccccaacatcgccagcgactccattgccttcggggatcaccacgtg
cctgcggccatggcctcgactgtgccgcactcgctgcgccaggcccgcgacaacaccatc
atagacctccaggcgcagttgaaagaagtcctgcgcgagaacgaacttctgcgcaaggaa
gtggacgtcaaggagagcaagcttagctcgtccatgaactccatcaagacgttctggagc
cctgagctgaagaaggaacgcgccctgcgcaaggacgaggtctccaagatggccgtgtgg
aaggagcagttccgtgtggtgcaggacgaaacgcagcacctccagatgaccatccaggct
ctccaggacgagctgcgcatccagcgcgacctcaaccagctgttccagcaggactgcggc
ggggcacggccgggcgaaccgttctccgccgagctcaccgaggagaacttccatcggctg
cacagcgaacacgaaaggcaagccaaagagctgtttctcctgaggaagactctggaggag
atggagctgcgcatcgacacccagaaacagaccctcaacgcccgggacgagtccatcaag
aaactgctggagatgctgcaaagcaaaggcctgtcgtccaaagccagcgaggaggagcac
gagcgcacgcggcgcctcgcagaggcagagatgcacatccaccatctggagagcctgctg
gagcagagggacaaggagacgtgcgctctcagggaggagctccaccgacgctacgaggga
gcgcctgattctgccaagaccaaagccctacagactgtcatcgaaatgaaggactctaaa
gtcagttctctagagcgcagtctgagggacctggaggaggaggtgcagatactgaagtct
aacggagctctaagcacagaggagagggaggaggagatgaagcaaatggaggtctatcgc
agtcactccaagttcatgaagaacaaggttgagcagctgaaggaggagctgtctcagagc
gaggcccaggcccaggagctgagaaagggaacggctgagctgcagcgggagctctctgca
atcgaccagctgaagcaggacctttccaggaaggacaccgaacttctgggcctgcagacc
aaactcgagacgctcgccaatcagttctcagacagcaagcagcacatcgacgtgcttaaa
gagtcgctcaccgccaaagaacagcgagctgccattctacagacagaggtggatgccctt
cgcctacgcctggaggaaaaggaagccatgctgaataagaagnacaagcagatccaggag
atgtcagaagagaaaggcacactgaacggagaaattcacgaccttaaagacatgctggat
gtcaaagagcgcaaagtcaccgtgcttcagaaaaagatcgagaacctgcaggagcagctg
aaggataaagagaagcagatgagtagtctgaaagagagggtcaaatccctgcaggctgat
acctccaacactgatacagctctcactacactcgaggaggcgctggctgagaaggagcga
attatcgagcgtgtgaaagagcagagagatcgagatgagcgggagaagggagaagagctg
gaagccagcaagaaagaactgaaggagctgaaggagaaactcagcctgctgcagggagac
ctgtctgaccgtgagacatctttgttggatctgaaggagcacgcctcatccctggcctcc
tcgggtttgaagaaggactccaagctgaagagcctggagattgcacttgagcagaagaaa
gaggagtgtatcaaactggagagtcatctcaaaaaggctcagacggcggctgcagaggct
caggcgaacacggagctgtcagagcgcatcagcgcactcgagcaggaggtgcagcgccac
agagaggatgccgggaaatcccaggccgaagtggaccgtctgctggagatcctccgagag
atggagaacgagaagaacgacaaagaccgcaagatcagcgaactggagaggcaaatgaag
gaccagagtaagaaggtggccactctgaaacacaaggagcaggtggagaagaaccgaaac
gcccagctgatggaggaggctcgcaagcgggaggataacatcagtgaaagctctcagcag
atcaaggactctctgaagcagaaagacgagcgaatcgaggaactggaggaggccctgcgc
gagagcgttcagatcactgcagagagagagatggtgctggcgcaagaagaagctgctcgg
acgcatgcggagaaacagatggaggagttgctcggagcgatggagaaagtgaagcaggag
ctggagtccatgaaggccaagctttcgtccacgcagcagtccctggtggagaaggaggcc
cacctgaccacactgagagccgagcgcaggaagcacctggaggaggttctggagatgaaa
caggaggcattgctggcagccatcagcgagaaggatgccaacatcgctctcctggagctg
tcctcttctaaaaagaagaagactcaggatgaagtggctctgctgaagagggagaaggac
cgactggtgcatcagctcaaacagcagacgcagaaccggatgaaactgatggccgataat
tacgaggatgaccatctgaagacttcttcgaattcagaccagagtaatcacaaaccctct
ccagatcagattattccccctctcatagacctcaatcagaaccgcagtaagctgaaattg
tacattggccacctcacagccctttgtcatgagagagacccccacatcttacaggacctg
gctccgccctcagcttaccaccgcagccagagggacgcctgggaggaggagcttcagaag
atgagcctggaggagctggaatcggagctggagcagtgcgagcgagagagcgccgagctc
caggagtacgccaactcggtcctgcagcagattgcggaccactgccctgacatcctggag
caggtcgtcaacgcactggaggagtcgtgctga
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