Silurus meridionalis (southern catfish): 124401456
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Entry
124401456 CDS
T08004
Symbol
lama2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124401456 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124401456 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124401456 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
124401456
NCBI-ProteinID:
XP_046729758
LinkDB
All DBs
Position
18:complement(26691697..26787119)
Genome browser
AA seq
3129 aa
AA seq
DB search
MKSPVVLALVPLFLSLSSAQLRGLFPAVLNLASMAEISANATCGENGAEMYCKLVEHVPG
QPVRNPQCRVCNLRSERPYERHPIEFAIDGTNRWWQSPSIKNGMDYHYVTITLDLQQVFQ
IAYVILKAANSPRPGNWVLERSLDGETFTPWQYFAITDTECITRFNIIPRTGPPAYKHDD
EVICTSFYSKIHPLENGEIHTSLINGRPSAEDPSPTLLSFTSARYIRLRFLRIRTLNADL
MTLAQNDPQSVDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNPNTKKLSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHVCEKCNCHSKSDECFYNQTVAEMNLSLNIHGEYKGG
GVCLGCSDNTAGINCQSCVEGFYRPRDVSPDDLRPCRPCACDSRGSVSTVCVPDDHQATE
GQSAGWCHCKQGYAGEKCDRCAFGYRGFPECRRCNCSAEGSVNTDPCQLPCVCKENVEGE
SCERCKEGYYNLHGDRSSGCEKCYCSGVSSVCXESQWEHTNIIQMSRWYLSGSGGEGRVW
AVPDTATPLTVTVNYTEAQALLTPPYYWNAPPSYLGNKILAYGGYLTYTISCTRDELQEI
HQGFNVIIEGGGLRLTDRRSEAVPALGLVGVVRRKVPLRAENFRHFDSNAAVSKSDIISV
LLKVTHLRVRAAHCQLHSLSSVSMEVASADSRSGVQARAVEVCVCPHGYTGTSCEMCIEG
YRRVNGTLHQGVCELCRCHGHASRCDENTGHCLGCEHNTMGPHCDLCSPGYYGDATRGTS
HDCRPCACPLQEPSNNFSPTCHLGEDGEVVCDRCPDGYSGSLCDRCDNGYFGSPRDVGGL
CRPCSCSGNLDLSVARSCDPLTGACLHCRRGYAGPNCETCADGYYGDAVGAKNCQLCECN
SNGSVSEVCNKESGQCQCLQRVLGRACDQCSPGTHMQAGSGCVPCHCNSFGSKSFDCSES
GQCRCQPGVTGQKCDRCSHGHFNFQEGGCTPCECSHVGNNCDPGTGRCLCPLNTVGDRCE
KCAPNHWGHDIATGCKACGCHVTGAVTQQCNVNTGCCFCRDEFKGEKCNECKLGYRNFPH
CVSCDCSLSGSNAETCDPESGVCACAERTGQCSCRMNVEGLRCEMCKFGTFGLSERNPLG
CSRCYCFGLSTSCTEAKGLIRMRLTLMPEQKVLPLVDKDNSKEITFGVTFQYPEIIANAE
VVGQELEEPYYWKLPKQFRGSMITAYGGKLKYTVYYEARDETGHASYEPQVIIRGGATRD
KVMIRHMVEPQIGQLTRHEIDMTEHEWKHHDSKPMSREDFMDILFHIENVFIRASHGNVM
RQSRISEISLEVAEEGRPSVESERAHQIEKCECPTGYSGLSCEECAAGFYRLSSRVSVSR
FRSGMGSCVRCECNGHSVSCDPDTGVCQNCQHNTEGEKCERCSAGFYGVVRGSPDDCKPC
ACPLSNPENNFSPSCVTEGFSDYRCTACPEGYIGKYCERCATGYHGDPRRAGGRCEECEC
DLVGALPVPCDTHTGACRCRPGATGLKCDRCMEKHVCGPAGIVSCDDDCAGLLIRDMDQL
LRLISGANLTLPLPPPYGALYRVENMTDELKHMLSPHRAPERLLQLADSNLGSLVTEMDE
LLSRANKVSADGEQTDSDAERSHKRAQDLEQFVKNTLLAAEALRDKARELNATLGRRDDG
VEKSVNEMQDEIKAMMNELRSRQLTHPHTHTVQEELRAAQDLLLKVQRGFAAPHRVSEEL
QQEVSSKLRDHDDKLQGAQELLEEAQNNIGNARTLNSDNLRRLEEVQRKRNESSKKKKET
EGILEDGEKILNEANALSDDINRGTEELEEMKRDLGPLHDQLDYRVSRLAQVVEDDKLKD
LVLRAENHAAQLNDSATILDRSSWPAKNLSFNATAAFNAYSNIKNYIDEADKAAKQAKAT
ATEAVQLATGPRGALKDEAKISLQKSQRLWNEAKNLENVVKDNGDNLGVLQQRLKSADAK
NKELLKGLDENLAVLRAIPNDTAAKLMATKQKASKANDTAIEVLARLKDMNQNLMGLNRN
FSTLKDDINKANNLIQDPEKNTIIHAAGAKVKDLEDEAERLLEKLKPIRELQDNLRKNIS
QIKELINQARKQANSIKVSVSSGGDCIRTYRPDIKKGRYNTIVLNVKTLAADNLLFYLGS
AKFVDFLAIEMRKGKXNFLWDVGSGVGRVEYPDLTINDGNWHRIEASRVGLNGSVSVRPL
EGPKAGIAPTWQSAKSPESYTVLDVDQNAYLFVGGMLGSVKKADAVKTITFSGCMGETYL
DSKPIGLWNYRERGGDCKGCVVSPQPADSETVVQFDGDGYAAVSRPTRWNPNASTVTFKF
RTFSTSAVLMYLATKDMKDFLSCELSEGRVKVSYDLGSGTGSALSHKRHNDGRWKSLTMT
RSKKKGTLTILDIDTNEEEKLFIDSQGGATGLNLKEDERIYFGGLPTIGNYRPEVTQRRY
SGCMKDIEVSRTPYNILSSSDYTGISKGCSIENVHTVSFSRPGYVELNPMVLDISSEITL
SFSTKKENGIILYGRGGLTTLTHSSQSIQNRNLGRKRRQTGEPYVSVQLIKGSLEVLVFS
GSKNPRRAIRKPDEVILHDGLEHSLRIRRHSGGSFSVQVDEEDRIEQALPNDQPIIIQRL
FVGGIPADMAGGLQRPGRPFEGCIWNLLINTIPMDFSQPVAFENAEIGRCPDVAPPLRPP
PPPPGAEKEEEKEDEEKEVTPPKLPTYTVRPPAPPSTATPPADVITVPAVPIDVHEPSVS
CAVGAEPEVLDLAKQFGLSRNSHMEFEFDDRKVKNSLIIEFELRTEADSGLVFYMARINH
ADFATVQVKEGMAHLSFDLGSGNTSVSVPRIINDGHWHKIKVLRDKQRGILTVDGRYIKH
TVSPKKADILDVVGKLYVGGLPLNYTTKRIGPVVYSINGCIRNFRMTNGPQDLDHPSSSY
RVGSCFTSVQSGSYFSGTGYAKAVSTYRVGNEVTVALEFRTSTATGVLLGVSGQTMDGLG
IELINGKLLFHADNGVGRVTATSQGAGLCDGQWHSVTAHKLKHRLELIVDGQKSEAASPD
ASSASADTNDPVFVGGYPEGLKQFGLTTSAPFKGCMRNIKLIKAGKVLEVQLNKATEITG
VQPLTCPAA
NT seq
9390 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctccggttgttctcgcgctggttcctctgttcctcagcctcagttctgctcag
ctgagaggtctgtttcctgctgtgttaaatctggcctcgatggctgagatcagtgcgaac
gcgacgtgtggagagaatggagctgagatgtactgcaagctggtggaacacgtcccggga
caaccggttcgaaaccctcagtgcagagtgtgtaacctgaggagcgagagaccctacgag
cgtcacccgatcgagttcgccatcgacggcaccaaccggtggtggcagagtccgagcata
aagaacggcatggactaccattacgtcaccatcaccctcgacttacagcaggtgttccag
atcgcatacgtcatcctgaaggctgcaaattctcctcggcctggaaactgggtcctggaa
cgatctttggatggagaaaccttcacgccatggcagtacttcgccatcacagatacagag
tgcatcactcgcttcaacatcatcccaagaaccggaccaccagcatacaagcatgacgat
gaggtcatctgtacatcattttactccaaaatccacccgctggagaacggagagatccac
acgtctctgattaacgggcgtccgagcgctgaagatccgtctccgactctgctcagcttc
acctccgcgcgctacatccgcctccggtttctacggatacggacgctgaacgccgacctc
atgaccttggctcagaacgacccccagtccgtcgaccccatcgtcaccagacggtattat
tactccattaaggacatctcggtcggagggatgtgcatctgctacggtcacgccaaagcc
tgtcccctcaaccccaacaccaagaaactgagctgtgagtgtgagcacaacacgtgtgga
gaaagctgcgaccgatgctgtcctggttacaaccagaagccctggatggctggaaccttc
ctcacacgccacgtctgtgagaaatgtaactgtcacagtaaatcagacgagtgtttctac
aaccaaaccgttgctgaaatgaacctgagtttgaacattcatggtgaatacaaaggaggt
ggagtctgcctcggttgctccgacaacacagctggaattaactgccagtcatgcgtggaa
ggcttctatcgaccacgtgacgtgagcccagatgacctccgaccctgcagaccctgcgca
tgcgactcgagaggctccgtctccacagtctgcgtaccggatgatcatcaggccactgaa
gggcagtctgcaggatggtgtcactgtaagcagggctacgcaggggagaagtgtgacaga
tgtgctttcggctacagaggttttcctgagtgtcggcgctgcaactgtagtgctgagggc
agcgtgaatacggacccgtgccagctaccgtgtgtgtgtaaggagaatgtagaaggagag
agctgtgagcggtgtaaagagggatattataatctccatggtgaccgttccagcggctgt
gagaagtgttactgctccggagtctccagcgtgtgtnnggagtcacagtgggaacacacc
aatatcatacaaatgtcccgatggtatttatcaggctcaggaggggaggggcgagtatgg
gcggtccctgatacagccacgccccttacagtaacagtgaactacacagaagctcaagct
ctcttgactccgccttattactggaacgctccaccctcttacctagggaacaagatcttg
gcatatggaggttatctgacatatacgatttcctgtaccagagacgagctacaggaaata
caccaaggctttaatgtcattatagagggcggtggcctgcgtttgacagacaggcgctcg
gaggcggttcctgcgctgggattggtcggggtggtgaggaggaaggttcctttgagagct
gagaattttcgacactttgactcgaatgctgcagtcagtaagagtgacatcatcagtgta
ctgctgaaagtcacacacctcagagtgagagcagcacactgtcaactacacagtctgtcc
tcggtcagtatggaagtcgcttctgcagactctcgttctggtgttcaggcgcgagcggtg
gaggtgtgtgtgtgtcctcacggttacaccggcacttcctgtgagatgtgtatcgaaggc
tacaggagggttaatgggaccctacaccagggtgtgtgtgagctctgccgttgccacgga
cacgcatcacgttgcgatgaaaacaccggacactgtctgggatgtgaacacaacaccatg
ggcccacactgtgacctatgctcacccggttactatggcgatgccaccagaggaacctca
catgactgccggccatgcgcttgtcctctacaggaaccttccaacaacttcagtccgacg
tgccacctgggtgaggacggagaggtggtctgcgaccgatgtccagacggttattccggg
tctctgtgcgacagatgtgataatggatatttcgggtctcctcgggacgtgggtggtttg
tgtcgtccgtgttcctgcagtgggaatttggatctctctgtggcccgtagctgtgacccg
ctaacaggggcgtgtcttcactgccgccgcggttacgcaggaccaaactgcgaaacctgc
gcagacggttactatggagacgccgtaggggccaagaactgccaactgtgtgagtgtaac
agtaatggctctgtatcggaggtgtgtaataaggaaagcggacagtgtcaatgtctccaa
cgtgtcctggggcgagcatgtgaccagtgtagtccagggacacacatgcaggcaggtagt
gggtgtgtcccatgtcactgtaactcattcggctcaaaatcgttcgactgcagcgagagc
ggtcagtgccgctgtcagcccggagtcacgggacagaagtgtgaccgctgctctcatgga
cacttcaacttccaggaaggagggtgcacaccgtgtgagtgttctcatgtagggaataac
tgtgacccgggaacagggcgctgtctctgtcctctcaacacggtgggagatcgatgtgag
aaatgtgcccccaatcactggggtcacgacatcgccaccggctgcaaggcgtgtggatgt
cacgtgacgggcgcagtcacgcagcagtgtaacgtgaacacgggatgttgtttttgtcgg
gacgagttcaagggcgagaaatgcaacgagtgtaaactgggatacaggaacttcccgcac
tgcgtctcctgcgactgctcgctgtccggctccaacgccgagacctgcgaccccgaatcc
ggagtgtgtgcgtgcgctgagaggaccggccagtgttcctgcaggatgaacgtggagggt
ctgaggtgtgagatgtgtaagtttgggacgttcggtcttagcgaaagaaatcctctcggc
tgcagtcgctgctattgtttcggcctgagtacaagctgcaccgaggccaagggtctgatc
cggatgaggctgactctcatgccggaacagaaggtgctccccctagtggacaaagacaac
agcaaggagattacatttggagtaacatttcagtatccggaaatcatcgctaacgccgag
gtggtcggacaggaactcgaggagccatactactggaagctcccgaaacagttccgaggc
tccatgataactgcgtacggagggaaactgaagtacaccgtttattacgaagctcgtgat
gaaacaggccacgcctcctacgagccacaggtcatcattaggggtggagcgaccagggac
aaagtcatgatacgccacatggtggagccacagatcggtcaactgacccgtcatgagatt
gacatgacggagcacgagtggaagcaccacgacagcaaaccgatgagccgcgaggatttt
atggacattctgttccacatcgagaacgttttcatcagagcttcacatgggaacgtcatg
agacaaagccggatctccgagatttctctggaggttgcagaagagggtcggccgtcggtg
gagagtgaacgagctcatcagatcgagaagtgcgagtgtcccactggatactccggcctc
tcctgtgaggagtgtgcagccggcttctacaggttgtcctcacgtgtctccgtctccagg
ttcaggtctggaatgggcagctgtgttcggtgtgagtgtaacggccacagcgtctcctgt
gacccagacaccggcgtctgccagaactgtcaacacaacacagaaggagagaagtgtgag
agatgttctgccggtttttacggtgtggttcgtggttctccggacgattgcaaaccctgt
gcatgtcctctcagcaaccctgaaaacaatttcagtccttcctgtgtaacggagggtttt
agcgactatcgctgcaccgcctgtcctgaaggctatattggaaagtactgtgagaggtgt
gcgactggttaccatggtgacccccggcgagcaggcgggcgctgtgaggagtgtgagtgt
gacctggttggcgcgttgcctgttccgtgtgacacacacacgggcgcgtgtcggtgccga
cccggagctacgggcctgaagtgtgaccggtgcatggagaagcatgtgtgtggaccagcg
ggcatcgtgtcgtgtgatgatgactgtgctgggcttctaatcagagacatggatcagttg
ctacgactgattagcggtgcgaatctgacactgcccctccccccaccatatggagcactg
taccgcgtcgagaacatgaccgacgagctcaagcacatgttatccccccatcgagctccg
gagagactcctgcagttggccgacagtaatcttggcagcctggtcactgagatggacgag
ttactgagcagggctaacaaggtgtccgccgacggagaacagacggactcggacgcagag
aggagtcacaaacgagcccaagatctcgagcagtttgttaagaacacactcctcgccgct
gaagcgctgcgtgataaagctcgtgagctgaacgctacgttgggtcggagggacgacggt
gtggagaaaagcgtgaatgagatgcaggacgagatcaaggccatgatgaatgaactccgc
tcacgccaacttacacacccacacacacacaccgtccaggaggaactcagggctgctcag
gatctcctgctgaaggttcagcgcggtttcgcggctcctcaccgtgtctcggaggagctg
cagcaggaggtctcatccaaactgcgagaccacgacgacaaactgcaaggagctcaagag
ctgctggaggaggcgcagaacaacattgggaacgctcgaaccctgaacagcgacaacctg
cgcagactggaggaagtgcagagaaagaggaacgagagcagtaaaaagaaaaaggagaca
gagggaatcctagaggacggagagaagatactgaacgaagccaacgctctctcagacgac
atcaaccgcggcactgaggagttagaggagatgaagcgagatctcggacccctgcatgat
caactcgactacagagtgtctcgcttggctcaagtcgtggaggatgacaagctaaaagat
ctagtgctccgagccgagaaccatgccgcccagctcaacgactctgctaccatactggac
aggtcatcctggccggctaagaacctctccttcaatgccacggccgcattcaacgcctac
agcaacatcaagaactacattgacgaggcggataaagcggccaagcaggcgaaagcaaca
gctacggaggctgtgcagctggccacgggacctagaggtgctctgaaagatgaagcgaag
atctcgttgcagaaaagccagcgtctttggaatgaggctaagaacctggagaacgttgtg
aaagacaacggagataatctgggagttctgcagcaacggctcaaaagcgccgatgccaag
aacaaagagctgctgaagggcctggacgaaaatctggcagtgctccgagccatccccaac
gacacggcggcaaagctcatggccacgaagcagaaagcgagcaaagcgaacgacacggcc
atcgaggttctggctcggctcaaagacatgaaccagaacctgatgggcctgaatcggaac
ttcagcacactgaaggatgacatcaacaaagccaacaatctcatccaagaccccgagaaa
aacacgataatccacgcagccggcgctaaagtgaaggatctggaggatgaagctgagcgc
ctgctggagaagctgaagccgatccgtgagctgcaggacaacctgcgcaagaacatctct
cagattaaggagctcattaaccaggctcgcaaacaggccaactctatcaaggtgtccgtg
tcgtccgggggagactgcattcgcacctacaggccagacatcaaaaaaggccgctacaac
accatcgtcctgaacgtgaagaccctcgccgccgacaacctgctcttttacctcggctcg
gccaaattcgtggacttcctggcgatcgagatgaggaagggaaagntgaacttcctgtgg
gatgtggggtcaggggtcggtcgagtggagtatcccgatctcactattaatgatggaaac
tggcaccgaattgaagcctcgcgagtgggtctaaatggcagtgtgtctgttcggcccctt
gagggccccaaagcgggcattgcacccacctggcagagcgccaagtctcctgagagctac
acagtgctggatgtggatcagaacgcttacctgttcgtaggaggaatgctgggcagtgtc
aagaaagcagatgcggtgaagaccatcaccttctccggctgtatgggagagacttacctg
gacagtaaaccaatcggattgtggaactacagggaaagaggtggagactgtaaaggatgt
gtggtcagtcctcagcctgccgactccgaaaccgtggtgcagttcgacggtgatggctac
gctgccgtcagtcgtccgacgcgatggaaccccaacgcttcaacggtgaccttcaaattc
cgcacgttctccaccagcgctgtgttgatgtatcttgccaccaaggacatgaaagacttc
ctgagctgtgagctgagtgaaggtcgtgtgaaggtcagctacgatctcggttcagggact
ggttccgcactcagccataaacgccacaacgacggacgatggaaatcactcaccatgact
cgctcgaaaaaaaaaggcactttgaccatcctggacatagacaccaacgaggaggagaaa
cttttcatagactctcagggaggagcaacagggcttaacctgaaggaggatgagaggatc
tactttggtggtttacccaccatcgggaactacaggcctgaggtgacccagaggagatac
tccgggtgtatgaaggacattgaagtatcccgaacgccatacaacatcctaagtagttcc
gactacactggaataagcaaaggatgcagcattgagaacgtccacacggtcagtttctcc
aggcccggctatgtggagttgaatccgatggtgttggacattagttcggagattacactg
tccttcagcaccaagaaagagaacggaatcatcctatatggccggggtggattgaccacc
ctgacccacagctcacagagcatccagaaccgcaacctcggccgcaagcgcaggcagacc
ggagagccgtacgtgtcagtccagttgattaaaggatctctggaggtgctggtgttcagt
ggcagtaagaacccacgtcgcgccattagaaaacctgacgaagtgattttacatgatgga
cttgagcactcactgcgcatccgccgccactcaggaggctcattctcagtgcaggtggat
gaagaggaccgaatagagcaggcactacccaatgatcagccaatcataatccagaggctg
tttgtgggcggaattccagctgacatggctggaggcctgcagagacccggccggccgttt
gagggctgcatctggaaccttctgatcaacaccatcccgatggacttctcgcagccggtg
gccttcgaaaacgccgaaatcgggcggtgtcctgacgtcgccccacctcttcgacctcca
ccgccaccaccaggtgcagaaaaagaggaggaaaaagaggacgaggagaaggaagtaacc
ccgcccaaattacccacttatacagtgaggccaccggctccaccttctacggccacgcct
cctgctgatgtcatcaccgttcctgccgtgcccatcgatgtccatgaaccatcggtctcc
tgtgcggtgggggcggagcctgaggtcctggatttagcgaagcagttcggtctctcgagg
aacagccatatggagtttgagtttgacgaccggaaggtgaagaacagcctgattatagag
ttcgagttgaggactgaggcagattcggggctggtgttctacatggccagaataaatcac
gctgacttcgccacggtgcaggtgaaggaggggatggctcacctaagcttcgacctcggc
agcggcaacacgtccgtcagcgtcccccgtatcatcaacgacggccactggcacaagatt
aaagtgcttagggataaacagaggggaatcctgactgtagacggacgttacatcaaacac
accgtgagtccgaagaaagctgacatcctggacgtggtggggaagctgtacgtcgggggt
cttcctctaaactacaccaccaagcgcataggaccggtggtgtacagcattaacggctgc
atcagaaacttccgtatgacgaacgggcctcaggatctggaccatccgagctccagttac
cgcgtgggctcgtgctttaccagcgtgcagagcggctcgtacttcagcggcacgggctac
gctaaagcagtgagcacctacagagtggggaacgaggtgacggtggcgctggagttccgc
accagcaccgctactggagttctgctcggcgtcagcggccagacgatggacggcctcggc
atcgaactcatcaacggcaagctcctcttccatgcggataacggagtggggcgtgtcacg
gcaacctcccagggggcggggctctgtgacggccaatggcattcggtcaccgcccataaa
ctgaagcaccgtctcgagcttattgttgacggacaaaaatcggaagcagccagtccggac
gctagctccgcctccgccgacacaaacgaccccgtctttgtgggcggatacccagagggc
ctgaagcagttcggcctgaccaccagcgccccctttaaaggctgcatgaggaacataaag
ctcattaaagcgggaaaggtcctggaggttcagctcaacaaagcgacagagattactggg
gtccagcctcttacatgtcccgctgcctag
DBGET
integrated database retrieval system
