Sinorhizobium meliloti RMO17: DU99_27175
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Entry
DU99_27175 CDS
T03395
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer00500
Starch and sucrose metabolism
smer01100
Metabolic pathways
smer01110
Biosynthesis of secondary metabolites
Module
smer_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
DU99_27175
Enzymes [BR:
smer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
DU99_27175
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
DUF3459
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AIM02874
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All DBs
Position
pSymB:359933..362029
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AA seq
698 aa
AA seq
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MNLTFSELDFMKPELGAEYTGQGTHFAVFSAHAEKIELCLFSEDGREETARMPLPKREGD
IWSGYIEGIGPGTLYGYRAHGPYDPHNGHRFNPNKLLLDPYAKLVAGELIWDDALFGYTI
GSPEGDLSFDERDSAPFMVKGVVQDPTFDWAGEEAIRRPWTETIIYESHVRGMTMTHPGV
PDDLRGTFLGMASDPIIEHLTKLGVSAIELMPVQYFLDDRYLVERNLRNYWGYQTLGFFA
PHERYLKGDRFTEFKTMVKRFHSVGIEVLMDVVYNHTAEGSERGPTLSFRGLDNFSYYRQ
SPDKPRHTYDTTGTGNTLNVAHPLVLRMVLDSLRYWVGVMHIDGFRFDLASTLGREYMEF
DREGGFFDAIRQDPILAGVKLIAEPWDVGEGGYQLGGFPPPFREWNDRFRDDVRRFWKGD
GGMVPVLAERILGSPVQFRHSDRAATSSINLVSAHDGFTLMDTVSYGEKHNEANGEENRD
GHSDNHSDNMGAEGPTDNGEIIEARKRRRAAMLATLMISQGVPMVLGGDELGNSQQGNNN
AYCQDNEIGWLDWSGADDGFVDFCRKLLAFRKDHPVLRQERFLDGEPDENGRVEIAWYKA
DGSPMDEDAWHDAELRLICAYICRVGQGEAPPAGEIVLVLNAGGDCEIALPHGNGSRRWL
RVLDTAADEPFGMRASADRDTIPAQSVVAFVPQEGGNG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgactttttccgaactcgatttcatgaaacctgaactcggtgcagaatacacc
ggccaggggacgcattttgcggtcttctcggcgcatgcggagaagatcgagctctgcctg
ttttccgaggatgggcgcgaggaaacggcgcgcatgccgctgccgaagcgcgagggcgat
atctggtccggttacatcgagggtatcggtcccggcaccctctatggctaccgcgcccac
ggaccttacgacccgcacaatggtcaccgcttcaatccgaacaagctgctgctcgatccg
tacgcgaagctggtcgcgggtgagctcatctgggacgatgccctcttcggttatacgatc
ggcagccctgagggcgatctttcctttgacgagcgcgacagcgcccccttcatggtgaag
ggcgtcgttcaggacccgactttcgactgggcgggcgaagaagcgatccgccgcccctgg
accgaaacgatcatctacgagtcgcatgtccgcggcatgaccatgacgcatcccggcgtg
ccggacgacctgcgtggcacgtttctcggcatggcgagcgatccgatcatcgagcacctg
acgaagctcggcgtttcggcgatcgaattgatgccggtgcaatatttcctcgacgaccgc
tacctggtggagcggaacctcagaaactattggggatatcagacgctcgggttctttgct
ccccacgagcgctatctcaagggcgaccgctttaccgaattcaagacgatggtgaagcgg
tttcattccgtcggcatcgaggttctgatggatgtcgtctacaaccatacggccgagggc
tcggaacgcggcccgaccttgagcttccgcgggctcgacaatttcagctactatcgccag
tcgccggacaagccgcgccacacctacgacacgacgggcaccggcaacacgctcaacgtt
gcccatcccctggtgctgcggatggtcctcgacagcctgcgctactgggtgggcgtgatg
catatcgacggcttccgcttcgatctcgcaagcacgctcggccgcgaatacatggagttc
gatcgcgaaggcggcttcttcgacgcgatccggcaggatccgattctggcaggtgtgaag
ctgatcgccgaaccctgggacgtcggcgagggcggctatcagctcggcggcttcccgccg
ccgttccgcgaatggaacgaccggttccgcgacgatgtccggcgcttctggaagggagac
ggcggcatggttccggtgcttgccgagcgcattctcggctcaccggtgcagttcaggcat
tcggaccgtgccgcgacctcgtcgatcaacctggtgagcgcccatgacggcttcaccctg
atggacacggtctcctacggcgaaaagcacaacgaggcgaacggagaggagaaccgggac
ggtcactccgacaatcattccgacaacatgggcgcagaaggcccaaccgacaacggggag
atcatcgaggcgcgcaaacgacggcgggcggccatgctcgccaccctgatgatcagccag
ggcgtgccgatggtgctcggcggcgacgagctgggaaacagccagcagggcaacaacaac
gcctattgtcaggataacgagatcggctggctcgattggagcggagcggacgatggcttc
gtggatttctgccgcaagctcctcgccttccgcaaggaccatcctgtcctgcggcaggaa
cgattcctcgacggagagcccgacgagaatggacgggtcgaaatcgcctggtacaaggcg
gatggcagcccgatggacgaggacgcgtggcacgacgctgagctccgcctgatctgcgcc
tatatctgccgcgtcgggcagggcgaagctccgccggccggcgagatcgtcctcgtgctc
aatgccggcggtgattgcgagatagcccttccccacggaaatggaagcaggcgctggcta
cgcgtgctcgacacggcagccgacgaaccgttcggcatgcgcgccagcgcggatcgcgac
actatcccggcgcagagcgtcgtcgccttcgtgccgcaggagggaggcaatggctag
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