Shewanella mesophila: K0I73_04655
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Entry
K0I73_04655 CDS
T09171
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smes03009
]
K0I73_04655 (rluD)
Enzymes [BR:
smes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
K0I73_04655 (rluD)
Ribosome biogenesis [BR:
smes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I73_04655 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QYJ87027
LinkDB
All DBs
Position
1044370..1045341
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AA seq
323 aa
AA seq
DB search
MTQEINLKSEITATQTGQRLDQTLAELFPDYSRTRIKEWILTGAVYVDGVVQIKPREKVL
EGQEIEVEATLQEETRAEAQDIDLNIVYEDDHIIVINKQAGLVVHPGAGNSDGTLMNALL
HHCPQIELVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQAREIVREYEAIVQGVII
SGGTVDAPIDRHPTKRTHMAVVHNGKPAVTHYRVAEKFRAHTRLRLRLESGRTHQIRVHM
AHIGHVLVGDPVYAGRPRPPKGVTPEFFDIYMGFKRQALHAVRLELAHPFTFEVMSWQAP
IPEDMHTLTRALREDTKANPSDY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagattaatctaaaaagcgagataacagcaacacaaacaggtcaaagattg
gatcaaactttggctgaattgttccctgactattctcgtacacgcattaaagagtggata
ttgacaggtgctgtctatgtcgacggcgttgtgcaaattaaaccaagagagaaggttcta
gaaggacaagagattgaagttgaagcgacgctgcaggaagaaaccagagcagaggcgcag
gacatagatcttaacattgtttatgaagacgaccacattatcgttattaataagcaagct
ggattagtggttcatcctggtgctggtaatagtgatggcaccttgatgaatgcgttactg
catcattgtccacagattgagctagttcctcgagccggtattgttcatcgtctcgataaa
gacactactgggttaatggtcgtagccaagacggttgaggcacaaactcatctcgttgcc
gcgcttcaggcccgtgaaatcgtgcgtgagtatgaagcgatcgttcagggcgtgattatt
tctggtgggacagtcgatgcacctatcgatcgccacccgacgaagcgaactcatatggcg
gtggttcataacggtaaacctgctgtgactcactatcgggttgctgagaagttccgagct
cacacccgattgagactgcgcctagaatcaggacgtacccaccaaatccgtgttcatatg
gcacatattggccatgtgttagtgggtgatcctgtttacgctggtcgtcctcgtccaccc
aaaggggtaacacctgagttttttgacatctatatgggctttaagcgccaagcgctgcac
gctgtaaggcttgaacttgcgcatccatttacgtttgaggttatgagctggcaggcacct
attcctgaggatatgcataccttaactcgcgcgctacgtgaagacactaaagctaatcca
tcggactactaa
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integrated database retrieval system
