Shewanella mesophila: K0I73_04790
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Entry
K0I73_04790 CDS
T09171
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
smes
Shewanella mesophila
Pathway
smes00550
Peptidoglycan biosynthesis
smes01100
Metabolic pathways
smes01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I73_04790 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I73_04790 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smes01011
]
K0I73_04790 (mrdA)
Enzymes [BR:
smes01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I73_04790 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smes01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K0I73_04790 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QYJ87048
LinkDB
All DBs
Position
complement(1075821..1077704)
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AA seq
627 aa
AA seq
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MAPRKRMAMHDHAAEASLFKRRAIFTFVCVIILLSILLSNLYQLQVLSFKDYETRSNDNR
IRVVPVAPSRGLIYDRHGKLLAENQPFFSLELIPEKVKDIPAALDELSQVIAISSDERES
VLESLKFHRRFKPLTIKNRLSEDEVAEFSVNQHKFPGFSVEAGLKRYYPYGSLLTHVLGY
VGRINSKDQWALQSNGQWKNYAATKDIGKQGIEKFYENLLHGMPGHLEEEVNNRGRTIRT
LKSVAPEPGQDIYLTLDLKLQKKAMELLDGRRGSIVAIDPRDGGILAMVSSPSYDPNQFV
HGISSKAYRELLNSRSRPLINRATQGQYAPASTVKPHLALLGLEEKVVTAKTRVWDPGFW
QMPGIERKYRDWKRWGHGWVDVTGAIVHSCDTYFYDLAYKTGIDNISTFMTRFGFGERTG
VDIFEESAGIMPSRDWKRIRYNQPWYNGDTISVGIGQGYWTTTPLQLANAVTILANKGER
YVPHLLKSIKDDTVRVDTPIDKMPPVELKDPNNWKIINSAMKDTAHRSRFIDAGYNAAMK
TGTAQVFSVAEDEKYDADTIDEHLRDNALIVAYAPYEAPTIVLAVVLENAGWGGVNAGPV
ARSLLDEYILRDNLPIETAGNPNHDRP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccacgtaaacggatggctatgcatgatcatgcagccgaagcatcactattcaaa
cgacgagcaatattcacttttgtctgcgttatcattttactcagcattctgcttagcaat
ctatatcaattacaggtcctctccttcaaagattatgaaacgcgctcgaatgataatcgt
atccgagtagttcctgtcgcccccagtcgtggccttatatacgatagacatggcaaacta
ttggcggagaatcagccttttttctcgttagagctgatccctgaaaaagtcaaagatatc
cctgcagcgctcgatgaattaagtcaggttatcgccatcagcagtgatgaacgagaaagc
gtcctggagtcgcttaaattccaccgcagattcaagcctctcaccattaaaaatcgactc
tcagaagatgaggtcgccgagttcagcgttaatcagcataaattccccggcttctcagtc
gaggctggactgaagcgttattatccctacggaagtctattaactcacgtgctgggttac
gttggacgcatcaacagtaaagaccaatgggcgcttcaaagtaatggccaatggaaaaat
tacgccgcaaccaaagacatcggtaaacaaggcatcgaaaaattttatgagaacctgctt
cacggtatgcctgggcatctcgaagaggaggtgaataaccgcggccgtaccatcaggacg
ttaaaatctgtagcaccagagccgggtcaagatatctatttaaccttagatctcaagcta
cagaaaaaggccatggagctcttagatggcagaagaggctcgattgtggcaatcgaccct
cgtgatggcggcatcctagctatggtatcgagcccgagttatgacccgaatcaatttgtg
catggtattagctcaaaagcctatcgcgaactactcaactctcgctcacgaccattaatc
aaccgcgccacgcaaggccaatatgcgccagcctcaacggtaaagcctcacctcgccctg
cttggactcgaagagaaagtggttaccgctaaaacccgtgtttgggatccaggtttttgg
caaatgcctggcatagaaagaaaataccgcgactggaagcgttggggccatggctgggta
gatgtaacgggggcaattgtgcactcctgtgacacctatttttatgacttagcctataag
acaggtatcgacaacattagcacctttatgactcggtttggctttggcgaacgaacaggt
gtcgatattttcgaagagtcagccggcatcatgccctcaagagattggaagcgcattcgc
tataaccaaccttggtataatggcgatacgatctctgtcgggattggccaaggttactgg
accaccactcctctgcaattagctaatgccgtcacgattttagccaacaaaggcgagcgc
tacgtgcctcacctccttaaatcaattaaagatgacacggttagagtcgacacgccaatc
gataaaatgcccccagtagaattgaaagatcctaataactggaagatcatcaactcagca
atgaaagataccgcccacagatctcgttttattgatgcaggctataacgctgcgatgaag
acgggtacggcacaggtgtttagtgtggctgaagatgaaaaatatgacgccgacaccatc
gacgaacatcttcgagataatgctttaatcgtcgcctacgcgccctacgaagcgccgact
atcgtattagccgtagtacttgaaaatgcgggctggggtggcgtcaatgctggccctgtg
gctcgctcactgttagatgaatatatcttacgagataacttaccgatagagactgcaggg
aatccaaaccatgaccgtccatag
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