Sulfuracidifex metallicus: RQ359_002176
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Entry
RQ359_002176 CDS
T09529
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
smet
Sulfuracidifex metallicus
Brite
KEGG Orthology (KO) [BR:
smet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
smet02048
]
RQ359_002176
Enzymes [BR:
smet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
RQ359_002176
Prokaryotic defense system [BR:
smet02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
RQ359_002176
Subtype I-B factors
RQ359_002176
Subtype I-C factors
RQ359_002176
Subtype I-D factors
RQ359_002176
Type II CRISPR-Cas system
Subtype II-B factors
RQ359_002176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
PDDEXK_3
PDDEXK_9
3HBOH
Motif
Other DBs
NCBI-ProteinID:
WOE50627
LinkDB
All DBs
Position
2019905..2020573
Genome browser
AA seq
222 aa
AA seq
DB search
MVVKEIIYKRLNENEIKSSFDGEYWPSQMWYCLRRQYYDRIFPSATTYDMTRFTVLGEAL
HNLIADMLKNEEGISVISEVPIRIPHPKNPEIVFSGRADDIIIVQFTKERYVIEVKSTED
LQSKVKKGFLPKKEHKAQLNLYLRAYPKSHGILLYVDRGNFDMEEIPIEFDAELYESTLQ
RAEDLHKYLTQRKTPPPEGKSAPDFNWQCNYCIHKARCDREQ
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggtagttaaagaaattatttataagcgcctgaatgaaaatgagataaagagttcattc
gacggagaatactggccgtctcaaatgtggtattgtttaaggagacaatattacgataga
atctttccatcagctacaacgtacgatatgacaagattcaccgttctgggggaagctctt
cacaaccttattgcggacatgttaaagaacgaagaaggcatctctgttatcagcgaggtt
cccataagaataccacatccaaaaaaccctgaaatcgttttctcagggagagcagatgac
attatcatagttcagttcacgaaggaaagatacgtaatagaagttaagagcactgaagat
cttcaaagcaaagtgaagaagggctttttacccaagaaagaacataaggcccaattgaac
ctatacttgagagcatatccgaaatcgcatggcatattgctttacgttgatagaggaaac
ttcgacatggaagaaatacctatcgaatttgacgcagaactctatgaaagtacactgcaa
agagccgaggatctgcacaaatacttgactcagagaaaaactcctccgcctgaaggtaag
agtgctccagactttaattggcaatgcaactattgtattcataaagccagatgcgataga
gaacagtaa
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