Sinorhizobium meliloti Rm41: BN406_03947
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Entry
BN406_03947 CDS
T02332
Name
(GenBank) putative DNA repair protein Avi_8016
KO
K10979
DNA end-binding protein Ku
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BN406_03947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smi03400
]
BN406_03947
DNA repair and recombination proteins [BR:
smi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BN406_03947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
CCM70229
LinkDB
All DBs
Position
pSYMA:complement(435632..436375)
Genome browser
AA seq
247 aa
AA seq
DB search
MMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGKEVKEEDEVKGYQRGEHEYVILEDEE
LENVALESTKTIDISTFTPRDSIEWIWLDTPYYLSPNDPVGQEAFSVIRDAMEAQNMVGI
SRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSYFEAIGDEQADSEMMPLVQQLIK
KQTKDWTPKMVADPVQERLLEIIAAKKKALKPQKAQGKTAPSSSPSNVVSIMDALRKSVA
AEKRATK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcgacctccgaaagcgagaaggtccgctttcataccctcaatcgccagacc
caaaaccgcgtcgtcagccactacgtcgactccgtgaccggcaaggaggtcaaggaagag
gatgaggtgaagggctatcagcgaggggagcacgaatacgttattctcgaagacgaggag
cttgagaacgttgctctcgaaagcaccaagacgatcgacatctccacattcacgccgcgc
gatagcatagagtggatctggctcgacacaccctattatctctcgcccaacgatcctgtc
ggacaggaggcattttccgtgatccgcgacgcgatggaggcgcagaacatggtcggcata
tcccggctagtgatctcacgccgcgagcgtgccgtcatgctcgagccacgtggtaagggt
atcgttctgtggacgctgcgctacggagacgaagttcgcgatgaagacagctatttcgag
gcgatcggcgatgaacaggccgattccgagatgatgccgctcgtccagcagttgatcaaa
aagcagaccaaggactggaccccgaaaatggtcgccgacccggtccaggagcggctgctc
gaaatcatcgcagccaagaagaaggcgttgaagccgcagaaggcccagggcaagacagca
ccttcgtcgtcgccgagcaatgttgtcagcatcatggatgccttgcggaaatcagtcgcg
gctgagaaacgggcgaccaaatga
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