Sphingosinicella microcystinivorans: SmB9_14280
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Entry
SmB9_14280 CDS
T05811
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SmB9_14280 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smic03400
]
SmB9_14280 (mutM)
Enzymes [BR:
smic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SmB9_14280 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SmB9_14280 (mutM)
DNA repair and recombination proteins [BR:
smic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SmB9_14280 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
BBE33770
LinkDB
All DBs
Position
1458175..1458978
Genome browser
AA seq
267 aa
AA seq
DB search
MPELPEVETVMRGLRPVLEGRRLARVEARRPDLRWPIPADLRQRLTGAVVTGIRRRAKYG
LIDTDRGDTMILHLGMSGRMRVDPETEEKHDHIVIETDEGRRAVLNDARRFGSVHLVPTS
DLDSHFLIKGLGPEPLGAPVDLSGFKGRFAPVKALLLDQRLIAGLGNIYVCEALFDAGVA
PTREGGKVKRAELAKLAAAIPEVLERAIAAGGSTLRDYRQVAGELGYFQHEFRVYGREGE
ACTRCAAPVARIVQSGRSSFYCPSCQK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaagtcgaaaccgtgatgcgcggcctgaggccggtcctcgaaggc
cgccgcctcgcgcgcgtcgaggcgcggcggccggacctgcgctggccgatcccggcggac
ctccgccagcggctgacgggcgcggttgtgaccggcatccgcaggcgcgcaaaatacggc
ctcatcgacaccgatcgcggcgacacgatgatcctgcacctcggcatgtccggccggatg
cgcgtcgatccggaaactgaagagaagcacgatcatatcgtcatcgagaccgacgaaggc
cgccgcgccgtgctgaacgacgcgcgccgcttcggatcggtgcatctggtgccgacgagc
gacctcgacagccatttcctgataaaaggtctcggcccggagccgctgggtgcgccggtc
gacctttccggcttcaaggggcgcttcgcacctgtgaaggcgctgctgctcgatcagcgg
ctgatcgcgggcctcggcaacatctacgtctgcgaagcgctgttcgacgcgggtgtggcg
cctacacgcgagggcggcaaggtgaaacgcgcggagctggcgaaactcgccgctgcgatc
cccgaggtgctggagcgcgccatcgccgctggcggctcaaccttgcgcgactaccgccag
gtggcgggcgaactcggctacttccagcacgaatttcgcgtctacgggcgagagggcgag
gcctgcacgcgctgcgccgcgccggtcgcccgcatcgtccagtcaggacgctccagcttt
tattgcccatcctgtcagaaataa
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