Salvia miltiorrhiza (redroot sage): 131001739
Help
Entry
131001739 CDS
T09291
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
smil
Salvia miltiorrhiza (redroot sage)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
131001739
NCBI-ProteinID:
XP_057784282
LinkDB
All DBs
Position
8:complement(19970369..19980564)
Genome browser
AA seq
1409 aa
AA seq
DB search
MSASKPLMLTTAALHSAALSSLSLPPPPPPGCPLTSPPASLPYSKLIPRTRFIVDGFKHA
DPNFSVSYFLSHFHSDHYTGLSPQWTSGIIYCSATTATLLHQILNIPQQLIFPLPLAQTV
LIDGSQVWLVDANHCPGAVQFLFKVPASCGGGAGSSSGSIVRFDKYVHTGDFRYSEEMKN
ESVISEFVGADAVFLDTTYCNPKFVFPSQEESIDYIVGVIERLGVENAGVTAKNVLFLVA
TYVIGKERILVEISRRCKRKIHVSGRKMAVLCALGLGETGVFTLDESESDVHVVGWNVLG
ETWPYFRPNFMKISEIMSERGYSKVVGFVPTGWTYEVKRNKFSVRTKDSFEIHLVPYSEH
SNYDELRAYVKFLKPKRVIPTVGADVENIDSKHANAMQKHFAGLVDEMAIKQEFLMSFLR
AGTKAVDVGKDSPFRSDDVIMEDKKDAPCSASHCCTDVEQESDRRSPFPQQEHAQCDSED
IRKDCLEKSAQELRDCLPIWVTLSQILDLLDSSGGNVIEAASNFYEHETEFHEQVLPGAL
VSCASAEGPENQPASPIKSIVKTNHSETVSLSQSFKLSSPKNIKKSANSPGKRKRNLDSK
GTKKARVGLTRNVNDSKQYTITKFFKNKMPVVPEETKVEVEFTDDKRKFPTEVTELNKEE
VNQFIQLVNGGESLRSYAATLLEKTKGDINMALDTYYNNNASTANDIKDNLLGSNKFKES
ECTSIISSMEGDAEQSERKNLEIKSDILFPTLSKDNLSVDYVSLPPDRYSPIEHGLESFP
ACWRKGQPAPYIHIARTFDLVKEEKGKIKATSMLCNMFRSLLVLSPEDVLPAVYLCTNRI
APEHENTELNIGGGIVISALEEACGTNRSKIKTLYDSLGDLGDVAQLCRQTQSLLAPPAA
LTIRQVYSILQKISVQTGSGSTSRKKSLIVNLMCSCREKEMKFLVRTLVRNLRIGAMMRT
ILPALAQAIVINYEGAAENLKEDIQRLSSAVVDAYNKIPNLDILIPSLMEKGIQFSSSAI
SMVPGIPIKPMLAKITNGVLEVLKIFQNRAFTCEYKYDGQRAQIHRLADGSIRVFSRNGD
ETTSRFPDLVEIVLDSCVNASVTFILDTEVVAIDRKNGRRLMSFQELSTRERGSKDSLVD
LDKIKVDICVFVFDIMFASGEQLLDLPLRARRKYLRDLFGEERPGYFEYAKEMTVEPQDA
DSNNETTTNRMSSFLSDAIYSSCEGIMVKSLDVDSGYAPSKRSDAWLKVKRDYVEGLSDS
LDLVPIGAWYGNGRKAGWFSPFLMACYNPDTEEFQSVCRVMSGFSDAFYKEMKDFFSGER
IMSKRPAYYRTAEVADMWFSAEVVWQIKGADLTLSPVHDAAFGLVHPSRGISVRFPRFIR
SLMDRKPEDCTTASDIADMFTLQTRKMEI
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttccaaaccgctcatgttaaccaccgccgccctccacagcgccgccctctcc
tccctctctctgccgcccccgccaccacccggttgccccctcacctctccccccgcctcc
ctcccctattctaaactcattccccgtacccgcttcatcgtcgacggcttcaaacatgcc
gaccccaatttctccgtctcttacttcctctcccacttccactccgatcactacaccggc
ctctcgcctcagtggactagcggcatcatttattgctcagccaccactgccactctcctc
caccaaatcctcaacattccccagcaattgattttccccttacctctcgcccaaactgta
ctaattgatggctcccaagtctggctcgtcgacgccaaccactgccccggcgcagttcag
ttcttgttcaaggtaccggcgagctgtggcggcggtgcaggtagtagtagtggtagtatt
gttaggtttgataagtatgtgcatactggtgatttcaggtattctgaggaaatgaagaat
gaaagtgtgatttctgagttcgttggtgctgatgctgtgtttctagataccacgtattgt
aatccgaagtttgtgtttccgagtcaggaggagtcgattgattatattgttggggtgatt
gagaggcttggagttgagaatgcgggtgtaactgcgaagaatgtgttgtttttggtggct
acatatgttattgggaaggagaggattttggtggagatctcgcggaggtgtaagaggaag
attcatgtgagtgggaggaagatggcagttttatgcgcgttgggattgggagagacggga
gttttcacactggatgagtccgagagtgatgttcatgttgttggttggaatgtgttgggt
gagacatggccatattttcgacctaacttcatgaagattagcgagattatgagtgagaga
ggttattcaaaggttgtaggctttgttccgactgggtggacatatgaagtcaagcggaat
aagttctcagtgagaactaaggactcattcgagattcatctagttccatatagtgagcat
tcgaactatgatgagcttagagcgtatgtgaagttcttgaagccaaagcgtgttattccc
acagttggtgctgatgttgaaaatattgatagcaaacatgccaatgcaatgcaaaagcat
tttgctggtttggttgatgaaatggccatcaagcaggaatttttgatgagttttcttcgt
gctgggacgaaggcagtggatgtagggaaggattcccctttcaggtccgatgatgtaata
atggaagataaaaaggatgccccatgctctgcatcacattgctgtactgacgttgaacag
gaaagtgacaggagatctccgtttcctcaacaggaacatgcgcaatgtgattcagaggat
atcagaaaagattgtttggagaaatctgcacaggaacttcgggactgcttgcccatttgg
gtcactctatctcagatattggacttacttgatagttcaggtggaaatgttattgaagca
gcgtctaatttttatgaacatgaaacagagtttcatgaacaggtccttcctggtgcattg
gtctcctgtgcttctgctgaaggtccagaaaatcaaccagcttcacctattaaatctatt
gtgaagaccaatcactctgagactgtttctctgagtcagagtttcaagttatctagtcct
aagaatataaagaagagtgcaaattctccaggtaaaaggaagagaaacctcgatagcaag
ggaacaaaaaaagcaagagtaggtttaacccggaatgttaatgattcaaaacagtatacc
ataaccaaattctttaaaaataaaatgcctgttgtccctgaagagactaaagttgaggtt
gaatttaccgatgataaaagaaagtttcccactgaggttactgagttgaacaaagaagag
gtgaatcagtttattcagcttgtgaatggtggtgaatccttaagaagctatgcagcaaca
cttcttgagaagaccaaaggagacatcaatatggctctggatacatattacaataacaat
gctagtactgccaatgacattaaagacaatttgctgggtagtaacaaattcaaagagtct
gagtgtaccagtataatctcctccatggaaggcgatgctgaacaatctgagaggaagaat
cttgaaatcaagtctgatattctcttccctactttatcaaaggacaatctttctgtagat
tatgtatctctgccacctgaccgatactcccctattgaacatgggttagaatcttttcca
gcatgctggaggaaaggacagcctgctccatacatccatatagcgcgtacttttgatttg
gttaaagaagaaaagggcaaaattaaagctacatcaatgctgtgtaacatgtttaggagt
ttattggtcctttcaccagaggatgtgcttcctgctgtgtatttgtgcacaaataggatt
gctcctgagcatgaaaatacggaactgaatattggtggtggcattgttatttcggccctt
gaagaagcttgtgggactaacagatcaaaaataaagactctttatgacagccttggtgat
cttggtgatgttgctcagctttgtcggcaaacgcaatcactacttgctcccccagcagcg
cttacaattcggcaagtgtattctatcttacagaagataagtgtacaaacaggtagtggt
agtacgagccggaagaaaagcctcattgtgaatctcatgtgctcatgtagagagaaggag
atgaaatttcttgtcagaactctggttaggaacttaagaattggagctatgatgcgaacc
attcttcctgctttagcccaggccattgtgattaattatgaaggagcagctgaaaacttg
aaggaagacattcagcgtctctcaagtgctgtagttgatgcatacaacaaaattccaaac
ttggatatacttatcccatctctgatggaaaaagggatccagttttcatcatcagccata
tcaatggtccctggcataccaatcaagccaatgcttgccaaaattactaatggagtgctg
gaggtgctgaagatcttccaaaacagagcattcacatgtgaatataaatatgatggccaa
cgcgctcaaattcacagattagcagacggttctatacgtgtcttctcaaggaatggtgat
gaaaccacatcaagattcccagatttagttgagatagtcttagactcttgtgtgaatgct
tctgtaacatttattttggacactgaggtggttgcaattgatcgaaagaatggtcggagg
ctaatgtcatttcaagagctatctaccagggagagagggagtaaggattccctggttgac
ttagataaaatcaaggttgacatatgcgtttttgtctttgacatcatgtttgcaagtgga
gagcagttgttggatctgcccttacgtgcaagacggaaatatttgagggatttatttggt
gaagagagaccaggttatttcgaatatgctaaagaaatgactgttgaaccccaagatgcc
gattcaaataatgaaactacgacaaataggatgagcagttttctatctgacgccatatac
tcctcatgtgaagggatcatggttaaatctcttgatgttgattctgggtatgctccatca
aagcgttctgatgcctggttgaaggtaaaaagagattatgtagaagggctaagtgattcc
ttggacttggtacctataggtgcttggtatggaaatggaagaaaagcaggatggttcagt
ccgtttctaatggcctgctacaatcctgatactgaagaattccagagtgtctgccgagtc
atgtcaggattttcagatgctttttacaaagagatgaaagacttctttagtggtgagaga
attatgtcaaaaaggccagcatactatcgaacagcagaggtggctgacatgtggttttcg
gcggaagtcgtgtggcagataaagggtgcagacttgaccttgtcaccagtgcatgatgct
gcctttggtttagtccatccatcccgcggtatttctgttagatttcctagatttattcga
tccctaatggacagaaagcctgaagattgcaccacagcttctgatatagctgatatgttc
actttgcagaccagaaaaatggaaatatga
DBGET
integrated database retrieval system
