Salvia miltiorrhiza (redroot sage): 131005341
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Entry
131005341 CDS
T09291
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
131005341
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
131005341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
131005341
NCBI-ProteinID:
XP_057788240
LinkDB
All DBs
Position
1:68307500..68325829
Genome browser
AA seq
1970 aa
AA seq
DB search
MWTNIFKIGGLHQISWFQFLPNEFDFSALPDKSAKVDPKDAAMSAVLSAHLQLQKEGFLS
AWTNSFVGPWDPSQGLHNPDEKIKLWIFLPGQHSSVGEKAQHAVSRLRGLASGFWVSPGD
SEEVASAISQALRNRIERALRGFSYVRFGDVFSKYQPFTQNEELFRRGQPVAEFIFAATE
ETIFVHVIISAKHVRALSNGDIEPFLSNSCRRTNDRISVVVSPHGMRGKLTGCCPGDLVK
QVYLSSGKFRDPNGTVGLPSKVALGSGPPGQLRGRNCFVEVTLGCQDKMVRNNANLHSNF
SQPHGTESPATRLCNQRWPLDKLPICEKKFVYPTEAVLVPVMQTSFARSSLKRFWLQNWA
GPSLSASSLVMHCFDFDSDDKVDSVDGSSLEPSGTRSHHGYRSSSNSNSSSYGSISSSSS
DSDRKALGAGDLEADADSLMSRQSGLSSLGQMQNDGLQLGSKRPRSGTSESFGQAGMVLN
PSMTDYGTMEANMSINGATNENVGSQWGWDDDDRGMGMDIQALLSEFGDFGDFFENDALP
LGEPPGTAESQVLMFPAPDGGELCSSPSTSVMDVPDRMLVSAGFPSFDNFNHLQAPDSME
DLVIKNQETTKSLGPNQVTSMLPSSNGEFDHVVKAEALMTFAPEYGGVEAPKSEISSVIF
RSPYVPRSSKVDSASSSNHYVYSATPPSPCCNGSHEKSTLPASEKACAEKKESCSALNSK
KYYTHVERGKQQTGGNNNSLGKGEGEGSSAQFFAFGQADVKPVSAKASDSSQKEDNSLPS
ARTVLATEIECLVCQVSMCRLRHTLLSSSNLSPSSLSGLSCSSTQNLGHVDSSTMVDNMT
SKSELKKTETIPVRIAGDVDGGMLDGSLTAPVGVWRSVGIPKVAKTSSSSMEVCPSIPHN
SFMEESMLTYGLRQPLQELLDGIAFLVQQATSFVDVALDADCGDGPYGWLALQEQWRRGF
SCGPSMVHAGCGGLLASSHSLDIAGMELVDPLSVDVQASLTIGLLQSDIKAALKAAFSNA
DGPLSVTDWCRGRNPSNESGMAYDGHSAESIASASECRDSSSTVTLSVGDPMSPSLTSAG
GASSLKGDGTRGDEGGTSLMESDQQHCSRIRPTLSVVPFPSILVGYQDDWLKTSASSLQL
WEKAPLEPYATVKHMSYYVVCPNIDPLTTAATDFFLQLGTVYETCKLGTHAPQSLGNEMD
IDSGKISPGFVLLDCPQSMKIDTNNASMLGSISDYFLFLSNGWDLTSYLKTLSKVLKTLK
FGSSVAVNTKEGNSGPCTVVYVVCPFPEPLAVLQTVVEASIAIGSVIRSSDKERRSMMHS
QVAKALSYPAAVDESFSNVLTLTGFSIPKLVLQIVTVDAIFRVTSPKLNELIILKEIAFT
VYNKARRISRGASGETMSSLSVPGGSHSVLMQMSPSVPGMWKDCVGSRIGGPPLQRESEL
DTSLRQGAWDNSWQTARSGGLGADHSRSGDIFPLDDIRCLFEPLFILAEPGSIERGLSPF
LGNSADSSKLSDDCTSTSFVQNSASSGTGDNGPVSQHDSLDSDGLASGHQKSLPSLHCCY
GWTEDWRWMVCIWTDSRGELLDSCVYPFGGISSRQDTKGLQSLFVQILQQGCQILQACSP
DVGVAKPRDLVITRIGCFFELECQEWQKALYSAGGSEVKKWSLQLRRSLPDGMPAGSNGN
SLQQQEMSLMQERALPSSPSPLYSSHSKSSAFMKGGIAQPSSRKQLMGGHVVLDNSKGLL
QWVQSISFVSVSIDHSLQLVFQADSSPGSSQGSTTSGLSGYLEGYTPVKSLGSTSASYLL
VPSPSMRFLPPSVLQLPTCLTADSPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRRDSRSL
AKEEWPSVLSVSLVDYCGGNIFSQDKLAKGANKPVGRGVSSESKDIEVETHIILDTIAAE
LHALSWMTASPAYLERRSALPFHCDMVLRLRRLLHFADKEHSRLPEKARV
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatattttcaaaatcggcggtttgcatcagatatcatggtttcagtttctt
cccaatgaatttgatttcagcgctctacctgataagagtgcgaaggtggacccgaaagat
gcagcaatgtcagcagtgctttcagcacatctgcagctgcagaaggaagggtttctcagc
gcatggactaattcttttgttggaccctgggatccttctcagggtttgcataatccagat
gaaaagattaagctttggatttttctgcctggtcaacactcctctgtcggtgagaaggcg
cagcatgctgtttccagattgagagggctcgcatctggattttgggtgtctcctggtgat
tctgaagaagttgcttctgccatatcacaggctttaagaaaccgtatagaaagagctctt
agagggttttcatatgtacgatttggagatgtgttctcaaagtatcagccatttactcag
aatgaagaattattcaggagaggtcaacctgtcgccgagttcatctttgctgcaacagaa
gaaacgatattcgtccatgttattatatctgctaagcatgtcagagctctttcaaatggt
gacattgaacctttcctcagcaattcttgcaggcgtaccaatgaccgaatttcagttgtt
gtatctcctcatggaatgcgtgggaagctcacgggatgttgtcctggtgatcttgtaaag
caagtgtatctgagctctggaaagtttagagatccaaatggaactgtaggtcttccttcc
aaagttgctctaggatctggaccgccaggtcaactaaggggacggaattgctttgttgaa
gtgacccttggttgtcaagacaagatggtgcggaataatgcgaacttgcatagtaacttt
tctcagcctcatggcactgagtctccagctaccagactatgtaatcagaggtggcctttg
gacaaacttccgatttgtgaaaagaagtttgtctatccaacagaggctgttcttgttcca
gttatgcagacatcttttgctagatcatctttgaaaagattctggctgcaaaattgggct
ggaccgtctttgtcagcttcatcacttgttatgcattgttttgattttgacagtgatgac
aaagttgattcagtggatggatcttctcttgaaccaagtggaactcgctctcaccatggt
tatcgtagtagtagtaacagtaacagtagtagctatggcagcataagtagttcctccagt
gacagtgatcgcaaggccctgggagctggtgatcttgaggcagatgcagattctttaatg
tccagacagtctggtttatcttccttgggtcaaatgcagaatgatggtcttcaactgggt
tctaaaaggccacgcagtgggacttcagagtcatttggtcaagcaggcatggttttgaat
ccttccatgactgattatggtaccatggaagccaatatgtctatcaatggagctacgaac
gaaaatgttggatctcagtggggatgggacgatgatgatagaggcatggggatggatatt
caagcactactatccgagtttggcgattttggtgatttttttgagaatgatgctttgcca
cttggggagcctccagggactgccgagtctcaagttcttatgtttcctgctcctgatggt
ggtgaattgtgtagcagccccagcacctcagtgatggatgtgccagatcgaatgcttgta
tctgcaggttttccatcctttgataacttcaaccacctacaggctccagattctatggaa
gatttagttattaaaaaccaagaaaccacaaagagtttgggtcccaatcaagttacttct
atgttgccatcttccaatggtgagtttgatcatgttgtaaaggctgaagcactgatgacc
tttgctccggaatatgggggtgtggaggcccctaagagtgagatctcctcagtgattttc
cgaagcccttatgttccgagatcttccaaagtggattctgcatcaagctcaaaccattat
gtgtactctgcaacacctccttccccttgctgtaatggatctcatgagaagtccaccttg
ccagcgagtgagaaagcatgtgcagaaaagaaagaatcgtgttctgctttaaattcaaaa
aaatattacacacatgttgaaagaggaaagcagcaaactggtggaaataataatagcctt
ggtaaaggtgaaggtgaagggtcatcagcacagttttttgctttcggtcaagcagatgtc
aaacccgtctcggctaaagctagtgacagctcacaaaaagaagataattctcttccatcc
gctaggactgtccttgcaacagagattgaatgcctagtttgccaggtttccatgtgtagg
ctacgacatacactgctgtcttccagcaacctttcaccttctagccttagtggattatct
tgtagcagcacccaaaatctaggtcatgttgattcaagcactatggtggacaatatgaca
agcaaatctgagttgaaaaagacagaaacaattcctgttaggatagctggtgatgtagat
ggaggaatgctagacgggtctttgactgcaccagttggtgtctggcgatctgttggaatt
cctaaagttgctaagacaagttcatcaagtatggaggtctgcccatccattccgcataat
tcattcatggaagaaagtatgcttacgtatggactacgacagccactccaggaacttctt
gatggtattgcttttcttgttcagcaagctacttcatttgttgatgtagctctggatgct
gattgtggtgatggtccatatgggtggcttgcacttcaagagcagtggaggcgtggattt
tcatgtggaccctctatggttcatgctggctgtggggggcttttggcttcttcccattcc
ctggacattgctggaatggagcttgttgatccactctcagttgatgtccaggcatcttta
acaattggtttgcttcagtctgacataaaagcagcattaaaagctgcatttagcaatgca
gatggccctctttctgttacggattggtgcaggggccgtaacccatccaatgaatcagga
atggcttatgatggacactctgcggagtctattgctagtgcaagtgaatgccgagattct
tctagtacagtaactttatctgttggggatcccatgagcccatctctgacctctgctggt
ggagcatctagcctcaagggtgatggaacaagaggggatgagggaggtacttctctgatg
gagtcagatcagcaacattgctcacggatacggcctacactatctgttgttccatttcca
tccatacttgttgggtaccaagatgattggctcaaaacctcagccagttccttacaactt
tgggaaaaggctcctctggaaccttacgcaactgtgaaacatatgagctactacgtggtg
tgcccaaatattgatccacttaccacagctgctactgatttttttctgcagcttggaact
gtttatgaaacctgcaagctgggaacacatgcaccccaaagtctgggaaatgagatggat
atagattctgggaaaatatcacctggttttgttcttcttgattgcccacaatcaatgaag
atagataccaacaatgcatctatgttgggatcaatcagtgattatttccttttcctatca
aatggctgggacctgactagctatttaaagactctgtctaaggttctgaagaccttgaaa
ttcggttcgtctgtggcagtgaataccaaggaaggaaatagcggaccatgcactgtagtc
tatgtggtctgccccttcccagagcctcttgcagtcctacagactgtggttgaagcttct
attgctatcggatcagtaattcgatcttctgataaagaaaggcgatccatgatgcacagt
caagttgcaaaagctttgagttacccagctgctgtagatgagtccttttcaaatgtttta
actcttacaggatttagcatcccaaagcttgtattgcagattgtgacagtagatgccatt
tttagggttactagccccaagctaaatgagctcatcattctaaaggaaattgctttcact
gtttacaataaagctcgacgtatttctcgaggagcttctggtgagacgatgtcatcatta
tctgtgccagggggttctcattcagtcttgatgcaaatgtctccatccgttcctggtatg
tggaaggattgtgttggttctcgaattgggggacctcctcttcagagagagagtgaactt
gacacaagcttgagacagggtgcttgggacaactcttggcagacagcaaggagtggagga
cttggagcagatcacagcagatctggagatatttttcctctggatgatattcgttgttta
tttgaaccactttttattcttgcagaacctggctccatagagcgtgggctttcacccttt
ttggggaattctgccgattcatcaaagctttcagatgattgcacaagtactagctttgtg
caaaattctgcttcttcaggaactggggataatgggcctgtttctcagcatgattccttg
gattcagatggtttggcatctggccaccaaaaatcactcccaagtctgcattgttgttat
gggtggactgaggattggcgttggatggtgtgcatatggacagactcaaggggagaattg
cttgacagttgtgtttacccctttggaggaatcagtagtcggcaagacacaaaaggcctg
cagtcccttttcgtccaaatactacaacaaggatgccagattcttcaagcttgttctcct
gatgttggtgtagctaaacctagagatctcgtgattacacgaattgggtgcttttttgag
ctcgagtgccaagagtggcagaaagctttgtattcagctgggggttccgaggtgaaaaag
tggtctctgcagctccgtcgttccctccctgatggaatgccagctggcagcaatggaaat
tctttacaacagcaggagatgagtttaatgcaagagagggcactgccttcttcaccaagt
ccattgtacagttctcattctaaatcttctgcattcatgaaaggtggcattgcacaacct
tcctcgaggaagcagctaatgggtgggcatgtggtgttagacaattcaaaaggcttactg
caatgggtgcagagcatcagttttgtttcggtctcgattgatcattcattacaactggtg
ttccaagcagattcatctcctgggtcaagtcaaggtagtaccacgtcaggtctgtcaggc
tatcttgaaggatacacacctgtgaagtccctcgggtcgacatccgcgtcctacctttta
gtcccttcaccgagcatgcgctttctgcctccttctgttcttcagctccctacatgtctc
actgcagattccccacctctagcccatcttctacatagcaaagggtctgcaattcccctg
tctacgggctttgtcgtttcaaaagcagtaccttcaatgaggagagattccaggagtttg
gcgaaagaagaatggccttcagttctctctgttagtttagtcgactattgtggaggaaac
attttcagccaagacaagttagcgaagggtgccaataagccggtagggcgaggtgtaagc
tctgaatccaaagatatcgaggtggaaacacacataatactagatacaatagcggcagag
cttcatgctttgtcctggatgactgctagtccagcgtacttggagagaagatccgctttg
cctttccattgtgacatggttttgagactcagaaggcttctccatttcgctgataaggaa
cactcgcggcttccagagaaagcacgtgtgtag
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