Breviolum minutum: v1.2.004288.t1
Help
Entry
v1.2.004288.t1 CDS
T04349
Symbol
symbB.v1.2.004288.t1
Name
(OIST) -
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
smin
Breviolum minutum
Pathway
smin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
v1.2.004288.t1 (symbB.v1.2.004288.t1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smin03041
]
v1.2.004288.t1 (symbB.v1.2.004288.t1)
Enzymes [BR:
smin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
v1.2.004288.t1 (symbB.v1.2.004288.t1)
Spliceosome [BR:
smin03041
]
Complex C
Other components
Step II factors
v1.2.004288.t1 (symbB.v1.2.004288.t1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
AAA_22
HA2_C
nSTAND3
AAA_19
ATPase
AAA_30
ABC_tran
AAA_16
TsaE
NACHT
PhoH
AAA_7
Roc
SRP54
ResIII
Motif
LinkDB
All DBs
AA seq
665 aa
AA seq
DB search
MDTTERGSKRPRPASQTPELPILAFREEIVKAVRQHRVVVLVGETGSGKTTQVPRFLYEE
HVSNQPGSISVTQPRRIAAISVANRVASELGCEVGGLVGFHVRFSNKTSRETKIKYMTDG
MLVRESATGGARSGIRGSSIVILDEAHERSIHTDVLLGLVKKALEQDEPPGLRVVVMSAT
IHAAPFVNFFGGKEVKLIQVPGRQHAVQVYYTPSPEPDILEAALVAVLQLHVSRPPGDVL
VFLPGQDDIDSLQRLLEEKQDMLAKERQDNPAKHVVDQQGSFSFGMKTWPTFEQVQNLLE
LVFQKTPPGCRKIVLATNIAETSITISGIRYVIDTGLMKLKMNHPQTGVQMLRTVPTSQA
SALQRAGRAGREAPGEVFRLYVESEFHKLLAQTPAEILRVDMASVYMDLKALGISKIVNF
PLVDRPPREALEKAAHFLCRIGALDTKDELTDLGRKLAMMPLHPLYAYCLNMSFEFECTA
EILSIISLLSADAPIFATSKQRAQTKAFEHEDGDHLSLLSAFSQWKKHQHPKVFASQNGL
NHAALEKAVTIRKQLKDVVHEAWGEAQIASCGGPKNWATVRRCLLKGLFTQTARRDEVNQ
NSYRTFLSRQEAKLHPTSVLHRRQPPPPCIIYNELVITAKSYLRIVTEVDPAWLPELCPR
FFCTS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttctcgcttggacttcctgaagagcacaatgttactcatgggatctcatttgatgagatg
gacaccacagaacgtggatccaagcggcctcgtcctgcttcccagacacctgaactgcca
attcttgcgttccgcgaggagattgtgaaagcagtccgacaacatcgagtcgttgtcctc
gtcggcgaaaccggcagcgggaagacaacacaggtgccccgctttctctacgaggagcat
gtgtcaaatcaaccgggaagcatctcagtgactcaaccccgccgcattgctgcaatctct
gtcgcaaaccgggtggcttcagaactcggttgtgaagtcggaggtttggtaggttttcat
gtccgcttctccaacaagacatcacgggagaccaagatcaagtacatgactgatggtatg
ctggtcagggagtcagcaactggaggtgctcgttctggaattcgtggttcttccatcgtc
attttggacgaagcacacgagcgcagcatccacaccgatgtgctgctgggacttgtgaag
aaggcgttggagcaagatgagccgcccgggcttagagtggttgttatgtctgcaaccata
catgctgcaccctttgtgaatttctttggcggcaaggaggtgaaactcatccaagttcct
ggacggcagcatgccgtgcaagtttactacactccatcaccggagccagacattctggag
gcagcactggttgctgtcctacagctccatgtttctcgaccccccggagatgtacttgtt
ttcttgccgggtcaagatgatattgacagtttgcagaggctattggaggagaagcaggac
atgttggccaaagagaggcaagataaccctgccaaacatgtcgttgaccaacaaggcagc
ttctcctttggtatgaagacgtggccaaccttcgagcaagtgcaaaacctcttggagctt
gtgtttcagaagactcctccagggtgtcggaaaattgttctggcgacgaacattgcagag
acttcgatcaccatttcaggaatcagatatgtcatcgacacaggattgatgaagctgaag
atgaaccaccctcagacaggagttcaaatgctgaggacagtccccacatcacaagcttct
gcattgcagcgagctggtcgagcaggccgcgaagctccaggagaagtgtttcgtctctat
gtggagtcagagttccacaagctgcttgcacaaacgccagcagagattctccgtgttgac
atggcatcagtctacatggacttgaaggccttgggcatctcgaagatagtcaactttcct
ttggtggatcggccaccaagagaggcacttgagaaagcggcgcactttttatgtcgcatt
ggtgcattggacaccaaggatgaattgactgacttgggcagaaagttggcaatgatgccg
ttgcatccactgtacgcctattgcttgaatatgtccttcgaattcgagtgtactgcagag
atcctcagcatcatttctttgctgtcagcagatgccccgatctttgcgacatcaaagcag
cgtgctcagacaaaggcatttgagcatgaggatggcgatcatctctcgctcttgtctgca
ttcagccaatggaaaaagcatcagcacccgaaggtgtttgcgtcgcaaaatggtctcaat
catgctgcattggaaaaagcagttacgatccgcaaacaactgaaggatgtcgtgcacgaa
gcttggggagaagcgcagattgcaagttgtggggggccaaagaattgggcaacagtgcgg
aggtgccttctgaagggcctctttacgcagacagcacgccgagacgaagtgaaccagaat
tcgtacagaactttcctctcaagacaggaagcgaagttgcatcctacaagtgtccttcat
cggcgccagccaccaccgccctgcatcatctacaatgagttggtcataactgccaaaagc
tatttgcgaattgtcaccgaggttgacccagcttggcttccagagctgtgtcctcgtttt
ttttgcaccagctaataatctcaactacagattcaaaaatattttcaataagaataataa
gattaccaataataagacaaaaacaaaaat
DBGET
integrated database retrieval system
