Breviolum minutum: v1.2.026897.t1
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Entry
v1.2.026897.t1 CDS
T04349
Symbol
symbB.v1.2.026897.t1
Name
(OIST) -
Organism
smin
Breviolum minutum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Nup54
PPR_2
PPR_3
WW
Motif
LinkDB
All DBs
AA seq
1950 aa
AA seq
DB search
MKKIQIPRKEIARDTALSGTVSHRGTQVSVFDSYWMLFGSKRCSTKGPLQPCSVPLLEEA
YSALVVALQAAVAAFLVLAPEEVCLVLLPEDRVAVQASSAAPVPPAAEEVSSAAQALRAV
EEASSAALPPLAPEEASSAALPPLAPEEASSAALPPLAPEEASSAALVPLAAEEASLAAL
APLAPEEASSAALPPLAPEEASSAALAPLAPEEASLATRVPQAAEEASSAALALPAAEEA
CGGLFGGSASSGGFGMGASSSGGMFGAASSGGGMGGMGGIPNAQEAQLICMELARRMEEL
YPVLGRAAGDRQSAAMAAAQGGGMRLSAGNFLAYSYSFSANLQALAQANNPQAFNPMQHV
DQMKWLQALQANPDPNSCYPEAMVGLPALEQRLQQQQKAVEDLGAALEELRSGMGNLKDH
LQAQSSQKLEECRQRQQRLQRQLLQVVVGLERRALQSGAARRAPQEEAQLESRLARLEEV
CCAPGGARARLEELSVQLRQLLQLPGGPSALLAGDDSKLALGEGTPGTQSAESSVLRVTA
QQGELLELLSEDLARRRRDAAQLEMALGMRGGAIAGLPSPGLLPGATPPAMPPGVSGVPG
RLPFMPSSSVVDTADDSLVDAKLQRVHSLPVSQQDRVYRNMTGGKSDVKHERAFDRRYRV
PDYQNWRKGVLTKEQKDMIAALKKCADSLDWEKALEISKTIPEDAGQDWQPVCRGVLSCL
CKALRYHEAKQTFERLPQKDTPAYNFMLLMLARLRYVDELHQMLWEMDNDGVPRSAVTYC
HIMSSCVATHSWSEALRTLDTLKTDSTLHGGANWDVAYLLPMTACARATQREKVEGLLEE
YKASGKGTPDRNHYNALIVACGSDAQAAQKVFGDLRAEGWTPARPDWHALMLCHTDCQEQ
RHVFAQMRQELPDARFEEAWAILLRTAIRNDDSEGAAWVLQDMSENGCDADSPTAIKVPS
LRRAISSWRARQRDEQLHRAWESATPAEQMLPQETSRPSVDGESELPHGWQSTVDPNTGQ
PYYWRTEDPTGTTTWDRPARELFTSMGAEDQRRVLNSGPLNIFREPMEMFKFRVSINKER
EKEIADRKGGEFVAKEAAEYEPRNLGYSAFVSHPVAMDKSEALVPAPASGLAPTGSFSVE
PEVETQQTAENATVKAPQMLLNLIVGGLGTGMLSLPWGMAGSSIIVGAVIIVLVIAVNLW
TIMILVHAAERYQVFDLGALLGKLPGRIGPGMQTFVNVMVWIVLYGSLLSYIIGICDSAQ
PFIKGTILEERWAIAGVACLIVLPLSFLDQKYLSFSSAAAIVVNLYLMILVGVEFFDKLD
KNDLPHNICEFGLAKGSVTMASTMMQSVIIQMCVLPMYQELENRSPSKFSRILLMAFSVL
AVLFIFLSVAAYGAFGPTVNSNLLLSLPNTPAMNVVQAGMIIVFAAVYPVMMIAMIAPLK
NLPLDRFGTGQSAARKKSLAVAGLTIFFVLASFIAALKVSELGLVNTLDGALCLLVFTAL
APGLVGLMLLGRDTTSWRLAMAALLLFGVLGAVAGFVFIDNEYELLEAACRVPSSHEASL
LGAWEGVPRVTRNFEWHESAPFGRQPDPFSMQGQVNDWVRANKSYLGEEGAKQLDMFGPA
DQWRIISDGPASENMDPMHVIQVRAKRSRELANTVSVMFAQRREQANESAQAQASAKPLF
KPELADTVQAFFNRVVGCEVPDTQRRTGGFGVQHVLEEDKSKLVGKVKGVEGVVEILKNK
YECLKGERYRVIGERGGPAGMWRLEGGKTIPKTHVKEGGWKWVLEEPEPEAKLAKPPPVA
TALVQTFTPKEQRPSAKKTESDKESDKESTSEDARSDRPKKKVVVVRKRRVKKEGDDMDV
KEPKKSKTPATRKRCQSSDDREAPKKVRVKGRVQDSDNDSRESTRGKQKRSQKGRTRAPR
RSAQEDSRGGDSRLSEDSRGRSPPQSKVRR
NT seq
5959 nt
NT seq
+upstream
nt +downstream
nt
tccggcagggcagttttgcacatcttcgccccccaagagaggcgatttcgcaccatgaca
gccatggttccagaggcgccttcaatgaagaagatacagattccacgaaaggagattgca
agggacacagctctaagtggtacagtatcacatcgtgggacgcaagtttctgtttttgat
tcttattggatgctgttcggctccaagcgttgttcaacaaaagggcctttacagccatgt
tcggtgcctcttctggaggaagcctattcggcgctggtagtggctctgcaggcagcagta
gcagcctttttggtgctggcaccggaggaggtatgtttggtgctgcttccggaggatcga
gtagcagtgcaagcctcttcggcagcaccggtgccgccagcagcggaggaagtctcttcg
gcagcacaggcgctgcgagcagtggaggaagcctcttcggcagcactgccgccgctagca
ccggaggaagcctcttcggcagcactgccgccgctagcaccggaggaagcctcttcggca
gcactgccgccgctagcaccggaggaagcctcttcggcagcactggtgccgctagcagcg
gaggaagcctctttggcagcactggcgccgctagcaccggaggaagcctcttcggcagca
ctgccgccgctagcaccggaggaagcctcttcggcagcactggcgccgctagcaccggag
gaagcctctttggcaacacgagtgccgcaagcagcggaggaagcctcttcggcagcactg
gcgctgccagcagcggaggaagcctgtggaggtttattcggcgggtcagcttcctctgga
ggatttggcatgggtgcatcctccagtggtggcatgtttggtgcagcctcatctggaggt
ggcatgggtggcatgggtggcatcccaaatgcccaggaggcgcaacttatttgcatggag
ctcgcccgaaggatggaggagctctatccagtccttggccgagctgctggagacagacag
agtgctgccatggctgctgcacagggtggcggaatgcggctgtctgctggcaacttcctg
gcatacagctattctttttcggccaatcttcaagctcttgcgcaggccaacaatccacag
gcattcaacccaatgcagcatgtggatcaaatgaagtggctacaggccttgcaagcaaat
cccgatccaaattcttgctatcctgaagctatggtgggcctccctgctttggagcagcgc
ttgcagcagcagcagaaagcggtggaagacttgggagctgccctggaggagcttcgatct
ggaatgggaaacttaaaggaccatttgcaggcgcaaagctctcaaaagctggaggagtgc
cgacagcggcagcagcgtttgcaacggcaactcttgcaggtggtcgtcgggctagagcgc
cgagcgttgcaaagtggcgcagctcgacgggctcctcaggaagaggcccagcttgagtct
cggctggctagattggaggaggtttgttgcgcacctggaggtgctcgggcacgtctagag
gagctgtcagttcagctgcggcagctattgcaactaccaggcggaccgagtgctttgctc
gctggggacgacagcaagcttgcccttggagagggaacaccaggcacacagagtgcggag
agctccgtattgcgcgtcacggcacagcaaggagagcttttggagctcttgagtgaagac
ttggcacggcgacggcgcgatgctgcgcagctcgagatggccttgggcatgcgaggaggt
gcaattgctgggcttccatctcccggtttgctcccaggagcaacacctccagctatgcct
ccaggagtctctggcgttcctggaaggctgccattcatgccttccagcagcgtggttgat
actgcggatgactcgctcgtagatgccaagctgcagcgagttcatagtcttccggtctca
cagcaggatcgggtctatcgcaatatgacaggcgggaagagtgatgttaaacatgagcgg
gcctttgacagaaggtaccgagtcccggactaccaaaactggagaaaaggcgtcttgaca
aaggagcagaaagatatgatcgcagcattgaagaaatgtgctgattctttggattgggaa
aaggccctagaaatctctaaaactattcccgaagatgcaggacaagattggcaacccgtt
tgtcggggtgtattgagctgcctgtgcaaagccttaaggtaccatgaggccaaacaaacc
tttgaacgattgccccagaaggacacccctgcctacaacttcatgctattgatgcttgct
cgcttgcgctatgtggatgaacttcatcaaatgctttgggagatggataacgacggggtg
ccgcgctcagcagtaacttactgtcacataatgagcagctgcgttgctactcacagttgg
agtgaagcattgcgcaccttggatactttgaagacagattcgaccctacatggcggtgcc
aactgggatgttgcctacctacttccaatgacggcttgtgctcgagcaacccagcgtgag
aaagtagaggggctgttagaggaatataaggccagtgggaagggtacaccagacagaaat
cattacaatgctctgattgtagcctgtgggtctgatgcacaggctgctcagaaagtcttt
ggagatttgcgggctgaaggttggactccagccaggccagattggcatgcactgatgctg
tgccatacagactgtcaggaacagcgccatgtttttgctcaaatgagacaagaactgcct
gatgctcgcttcgaagaagcttgggcaattctgcttcgaacggccatccggaatgatgac
tcagaaggagcagcttgggtgctgcaggacatgtctgagaatggctgcgacgccgattcg
cccacagccataaaagtaccatccctgaggcgagcaatttcatcctggagggcacggcaa
cgagatgagcagcttcaccgagcttgggaaagtgccacaccggcagagcagatgcttccg
caggaaacttcgagaccatccgttgatggtgaaagtgaactaccgcatggttggcaaagt
acggtggaccccaacactggacaaccttattactggcgaactgaagatccaactggaaca
actacttgggatcgcccagcgcgggagctattcaccagcatgggtgccgaggatcagcgt
cgagttctgaactctggacccctcaacattttccgggagcctatggagatgtttaaattc
agagtctcaatcaacaaagaacgcgaaaaggagattgcagatcgcaaaggcggtgagttc
gtcgcaaaggaggctgcagagtacgagccccgaaatttgggctactcagcttttgtgtca
catccagtggcaatggacaaatcggaagctctggttccagcacctgccagtggtttggct
cccactggaagtttctccgtggagccagaagtagagacccaacagacagctgaaaatgcg
acagtcaaggcgcctcagatgctcttgaacctgattgttggaggtctgggtactggtatg
ctgagccttccttggggcatggccggatcatccattatagttggtgccgtgattatagtg
ttagtcattgctgtgaacttgtggacaatcatgatccttgttcatgcagctgagaggtat
caggtgtttgacttgggcgcattgctgggcaaattgcctggcagaataggtcctggcatg
cagacgtttgtgaacgtcatggtgtggatagtactgtacgggagcttgctcagctacatc
attggcatttgcgattcagcgcagcccttcatcaaagggacgattttagaagagcgatgg
gccattgccggggtggcatgcctcattgttctacctcttagctttcttgatcaaaaatac
ttgtccttctcttcggctgcggcgattgttgtgaacctgtacctgatgattctagttgga
gttgaattctttgacaagctggacaaaaatgacttgccgcacaacatttgtgaatttgga
ttggccaagggctcggtcactatggccagcactatgatgcagagcgtgatcatacagatg
tgcgttttgccgatgtaccaggagctcgagaatcgatcaccaagcaaatttagtaggata
ttgttgatggccttttccgtcctggcagtgctcttcattttcttgtcggttgcggcatat
ggagcttttgggccaactgtaaatagcaatcttctgctttcattgccaaacactcctgca
atgaatgtggtacaagctggaatgatcattgtgtttgccgctgtttaccctgtcatgatg
attgctatgattgcgcccttaaagaatcttccgctggatcgatttggaactgggcagagt
gcggcccgcaaaaaatcattggcagtagctggcctgacgatcttctttgtgctggcgtca
ttcattgccgcactgaaggtatcggagttgggtttggtgaataccctggatggtgcgttg
tgtttgctggtttttacagctttggcccctggcttggttggcctcatgctgcttggaaga
gacactacatcatggaggctggccatggctgcgctcctactcttcggagttcttggagca
gtggctggctttgtttttatcgacaatgaatacgagcttcttgaggcagcttgtcgagtc
ccaagctcacacgaagctagcctccttggtgcatgggaaggtgtcccacgagtcaccaga
aatttcgaatggcatgaaagcgcgccatttgggcggcagccagatccattttccatgcaa
gggcaagtcaacgactgggtcagagcaaacaagtcctaccttggcgaggagggtgccaag
cagttggatatgttcggccccgcagatcagtggcgcatcatctctgatggccctgccagc
gagaacatggatcccatgcatgtcattcaagtacgggcaaaaaggagtcgggagctcgcg
aacactgtctcagtgatgtttgcacagagacgtgagcaagccaacgaatctgcacaagca
caggcatctgcaaagccgctcttcaagccggagcttgcagacacggtccaggccttcttc
aaccgtgttgttggttgcgaggttcccgatacccaaagacgaaccggtggctttggagtt
cagcatgtgctggaagaagacaagtccaaactggttggaaaggtcaaaggagttgaaggt
gtggttgagatcctcaagaacaagtacgaatgtttgaagggtgagcgctaccgcgtgatc
ggtgaacgtggcggtcctgctggcatgtggcgcttggagggcggaaagaccataccaaaa
actcatgtcaaggagggtggttggaaatgggtcttggaagagccagagccggaggcaaag
ttggcaaagccaccgcctgtggccactgccctcgtacagactttcacacctaaggagcaa
cgaccatcagccaaaaaaactgagtctgataaggaatcagacaaggagtcaacttctgaa
gatgctcgaagcgaccggccaaaaaagaaggtggtggtcgtgcggaaacgtcgggtgaag
aaggaaggcgacgatatggacgtgaaggagcccaagaagagcaagacacctgcaactcgc
aaacgttgtcaatccagtgatgaccgagaggccccaaagaaagtcagggtcaaaggtcgt
gtccaggacagcgacaatgattcccgggaaagtacgagaggaaagcaaaagagaagccag
aagggtagaactcgagctcccagaagatctgctcaggaggatagccgtggaggggacagt
cgcctatcagaggacagccgaggtcgctctccaccccaatcaaaggttcgccgataatca
agaaaaaaattaattgaat
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