KEGG   Sinorhizobium meliloti AK83: Sinme_2962Help
Entry
Sinme_2962        CDS       T01521                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
smk  Sinorhizobium meliloti AK83
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:smk00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Sinme_2962
   03410 Base excision repair
    Sinme_2962
   03420 Nucleotide excision repair
    Sinme_2962
   03430 Mismatch repair
    Sinme_2962
Enzymes [BR:smk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Sinme_2962
    6.5.1.6  DNA ligase (ATP or NAD+)
     Sinme_2962
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Sinme_2962
DNA replication proteins [BR:smk03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Sinme_2962
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Sinme_2962
DNA repair and recombination proteins [BR:smk03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Sinme_2962
   NER (nucleotide excision repair)
    Other NER factors
     Sinme_2962
   MMR (mismatch exicision repair)
    Other MMR factors
     Sinme_2962
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
LinkDB All DBs
Position
1:2996153..2997766
Genome map
AA seq 537 aa AA seqDB search
MKAFAELLDRLVLTPQRNAKIRLLVDYFRGAPDPSRGYALAAIAGTLSLNTVKPALIRDL
LLERMDDVLFHYSYDYVGDLAETVSLAWEPPPDVALQDIPLGEVVERLQRAGRSEVRSLV
RDFLDRLDTSGRFALLKLATGGLRIGVSARLAKQALAEMGGKEVSEIETLWHGLEPPYLP
LFLWLTGEAEMPVLKTPAVFHSVMLATAVGDGDLDGLDPADFAAEWKWDGIRVQLANVGG
ARRLYSRSGDEISSAFPEIIEAADITGVIDGELLVGGTMRSNRATGTFADLQQRLNRKTV
SRKLMDEYPAFIRAYDILFSGERDIRPEPFRVRREALSSLIEAASPQHFDLSPLVGFSSW
KELDELRSSPPDPVIEGVMLKRLDSPYMAGRAKGPWFKWKRAPFNIDAVLMYAQRGHGKR
SSYYSDFTFGVWAEGEDGASLVPVGKAYFGFTDAELEVLDRFVRDNTVERFGPVRAVRAE
PDSGFVVEVAFEGLNRSTRHKSGVAMRFPRIARLRPDKLPRDADRLETLQAMMGTQR
NT seq 1614 nt NT seq  +upstreamnt  +downstreamnt
atgaaagcatttgccgaactgctcgaccggctcgtgctgacgccgcagcgaaacgccaag
atccggttgctcgtcgactatttccgcggcgcacccgatccgagccgcggctatgcgctg
gcagcgatcgcggggacgctctcgctcaacacggtgaagcctgccctcattcgcgacctg
ttgctcgagcgcatggacgacgtgctgttccactattcctacgactatgtcggcgacctc
gcggaaacggtctctctcgcctgggagccgccgccggacgtcgcccttcaggacattccg
ctcggcgaggttgtcgagcggctgcagcgggccggccgctccgaggtccgttcgctcgtc
cgcgactttctggaccggctcgacacctccggccgcttcgccctcctgaagctcgcgaca
ggaggcttgcgcatcggggtctcggcacggctcgcgaagcaggcgctggcggagatgggc
ggcaaggaggtgagcgagatcgaaacgctctggcacggattggagccgccatacctgccc
cttttcctctggctcaccggtgaggcggagatgccggtgctcaagacacctgcggtcttt
cattcggtgatgctcgcaacagcggtcggcgatggcgatctcgacgggctcgatccggcc
gacttcgcggccgagtggaaatgggacggcatccgcgtccagctcgccaatgtcggcggg
gctcgacgcctctattcgcgcagcggcgacgagatatcctccgcctttcccgagatcatc
gaagctgccgatatcacgggcgtcatcgacggcgagcttctggtcggcggaacgatgcgc
agcaaccgcgccacgggcacattcgcggacctgcagcaaaggctgaaccgcaagaccgtc
agccgcaagctgatggacgagtatccggccttcatccgtgcctacgacattctcttttcc
ggcgagcgcgatatcaggcccgagccctttcgtgtgcgccgcgaagccctgtcgtcgctg
atcgaagcggcctcgccgcagcatttcgatctctcgccgctcgtcggcttttcaagctgg
aaggagctcgacgagctgcgctccagcccgcccgatccggtgatcgaaggcgtcatgctg
aaacggctggattcgccctatatggccggacgggccaaggggccgtggttcaagtggaag
cgggcgcccttcaatatcgacgccgtgctgatgtatgcccagcgcggccatggcaagcgg
tccagctattactccgatttcaccttcggcgtctgggcggagggtgaagacggggcgagc
ctcgttcccgtcggcaaggcctatttcggcttcaccgatgccgagctcgaggttctcgat
cgcttcgtgcgcgacaatacggtcgaacgcttcggccccgtgcgcgcggtgcgcgccgaa
cccgacagcggcttcgtcgtcgaggttgcctttgaaggcctcaaccgctccacgcgtcac
aaatccggggtagccatgcgcttcccgcggattgcccgcctcagacccgacaagctgcct
cgcgacgccgacaggctcgagacactgcaggcgatgatgggaacgcaacgctga

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