Selaginella moellendorffii: SELMODRAFT_101391
Help
Entry
SELMODRAFT_101391 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00906
Carotenoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SELMODRAFT_101391
Enzymes [BR:
smo01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
SELMODRAFT_101391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
FAD_oxidored
GIDA
NAD_binding_8
FAD_binding_3
Pyr_redox_3
Thi4
Motif
Other DBs
NCBI-GeneID:
9636439
NCBI-ProteinID:
XP_002974344
JGI:
101391
UniProt:
D8RTT4
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MASLIKPSTAFSTGFLAKELQRGCGIARISYCRSSRKQQSYAKAAVAPLQKNYVDEGDYV
KAGGQELSFVQMQALKPMDQPKIADKLTAFTDDKVLDLAVIGCGPAGLALASEAARRGLS
VVLVGPDMPFTNNYGVWQDEFDALGLESCIEHTWKDTAMYFTDNDCLLLGRAYGRVGRDQ
LREELLRRCQEANVLYHCSEVEDISRVDKNSGSTLACASGKSIKCRLATFASGAASGKFL
KYEALEERGMSVQTAYGIEVEVEKHPYDPNVMVFMDYRDYKAESGDGEVPSFLYVMPFSE
TRVFFEETCLAARPVMSFNTLKDRLYTRLNKLGVKVVHMYEEEWSYIPVGATLPDTNQQH
LAFGAAASMVHPATGYSVVRSLSEAPTYAAAIAAALQPRKASPGYLRLQRDSISAALEAW
NVLWPNERKRQRAFFFFGLELLLQLDVQSMRTFFQTFFKLPERMWKGFLAADLSSAELIW
FALLTFLVAPNTLRMQLVKHLIKDPSGANLIKFYTQLWP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttgatcaaaccatccaccgccttctcgactggttttctcgccaaagaatta
caaaggggctgtggaattgccaggatttcttattgtaggagctcaagaaagcagcaaagc
tatgccaaagcggcagtggctcctctccagaagaactatgtcgacgagggagactatgtc
aaggctgggggccaagagcttagcttcgtccagatgcaagctttgaagcccatggatcaa
ccaaagatcgctgacaagttgacggcattcactgacgataaggtgcttgatctggccgtg
ataggctgtggaccagcaggcctcgcgctagcttccgaggcagccaggcgaggattgagt
gtggtgctcgtgggtccggacatgccattcacgaacaactatggagtttggcaggacgag
tttgatgctcttgggctggaaagttgcatcgagcatacttggaaagacacggctatgtac
ttcacggataacgattgtttgctgctggggcgtgcttatggtcgcgtgggacgtgaccaa
cttcgggaagaactgctgaggaggtgccaagaagcgaacgttttgtatcactgctcggaa
gttgaagatatttcccgggttgacaagaacagtgggagtacacttgcgtgcgcaagtggg
aaatccatcaagtgcaggttggctacatttgcttcaggtgcggcatctggtaagtttttg
aagtacgaggcgcttgaagagcgaggaatgagcgtccagacggcatacggcattgaagtt
gaggtcgagaaacatccgtacgatccgaatgtgatggtgtttatggactatcgagattac
aaagctgaatcaggagacggcgaagttccgtcgtttctgtatgtcatgcctttctcagaa
accagagtcttttttgaggaaacctgtctagctgcaagacctgttatgtcattcaatact
ctgaaggatcggctttatacgcggttaaacaagctgggagtgaaagttgttcacatgtac
gaagaagaatggtcttatatacctgttggtgccacccttccagacacaaatcagcagcac
ttggcatttggtgcagctgcaagcatggttcatcctgcaacaggctattcagttgttcgt
tcattgtccgaagcccctacctatgcagctgctattgcggcagcactacagcctcgaaaa
gccagtcctggttatcttcgacttcaaagggattccatatccgcagccctcgaggcatgg
aacgtgctttggcctaacgaaaggaaacgacagcgagcattttttttctttggcctcgag
ctactgctgcagcttgacgtgcaaagcatgcggacattcttccagacgttcttcaaactt
cctgaaaggatgtggaaaggcttccttgcagctgatctctcctctgctgagctgatatgg
tttgcactgctcacgtttctagttgctccaaacacgctccgcatgcaactggtcaagcac
ttgatcaaggatccaagtggcgccaatttgatcaagttttacacacagttgtggccgtaa
DBGET
integrated database retrieval system
