Selaginella moellendorffii: SELMODRAFT_110329
Help
Entry
SELMODRAFT_110329 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00130
Ubiquinone and other terpenoid-quinone biosynthesis
smo00940
Phenylpropanoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Module
smo_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SELMODRAFT_110329
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
SELMODRAFT_110329
Enzymes [BR:
smo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
SELMODRAFT_110329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9633862
NCBI-ProteinID:
XP_002979357
JGI:
110329
UniProt:
D8S7J8
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MAVTSKRKVTSAAYDRQSGIYASDRCDIVFPEGELLDFATFVSSKNILNPAKNVALVDGV
TGRELTFDQVMEETVSLGTCLHHLGIEQGDVVMLLAPNSIYYPLAVMAIARIGAVVATPS
PMGSAKDVEFQARLANAKMVITTSELLFKTRGLGLETIVMDDDGSFSLAEDPGKAAKVRA
SSTVQPRIHRDDPAAILYSSGTTGMSKAVVLSHANVVAQILQLAREELYESALAGRKLSY
DVPLCALPMSHIFGLVAVTLKQLYLGNRLVILPGFELRTMLSAVESYRISHIYVVPPVII
TLAKFLQKTTTMHDLTSLRAILCGAAPLGEELVLTLSHLLPNAFFFQLYGITEATGALTL
NDTVASGNTASAGTLLSNVEAKVLDVRSGAALPPNCQGELFLRSPTTMLGYISNPEATKL
SITSDGWLRTGDLVYFDDAGNLFVVDRIKELIKYKTLQVAPAELEALILTHPLVLDAAVV
ASKDEEAGEIPVAFVVPSADGELTEDEVRVFVARNVAAHKRVRRVTFIDAIPKTPSGKIL
RKDLALKA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcacgagtaaaagaaaagtcaccagcgcagcttacgatcgccagtctgggatc
tacgccagtgaccgctgtgatatcgtgtttccggagggcgagctgctggactttgcaaca
ttcgtttcatcgaaaaacatcttaaatccggccaagaatgtcgcgctggtggatggagtc
acgggacgagagcttacatttgatcaagtcatggaagaaacagtatctctgggaacttgt
ctccatcacttggggatcgagcagggggatgttgtgatgctactggctccaaactcgata
tactatccgctcgcagtgatggccattgccaggattggagctgtggttgctactcccagt
ccaatgggatctgctaaagacgtcgagttccaagcaaggcttgcaaacgcaaagatggtg
atcacgactagcgagctcttgttcaagacaagaggactgggcctggaaactatagtcatg
gatgacgatggatcgttttctctagcagaagatcccggaaaggcagcgaaagtacgagct
tcctcgactgtccagccacgaattcacagagacgatccagcagctatattgtactcgtcg
ggaacgaccgggatgagcaaggcagtggtgctgtctcacgccaacgtcgtcgcgcaaatc
ttgcagcttgctcgcgaagaattatatgagagtgctcttgccggacgaaaactttcatac
gacgtacctctttgcgccttgccgatgtcacacatctttggactggtagcggtgactttg
aagcagctctaccttgggaaccggctagtgatccttccgggctttgagctgcgtacgatg
ctatcggcggtcgaaagctaccggatctcgcacatctatgtcgttcctccggtgatcatc
actctcgcgaagtttttgcaaaagaccactacgatgcacgaccttacatccttgcgagct
attttatgtggtgcagccccactgggagaggaactggtgcttactctaagtcatttactt
ccaaacgcatttttctttcagctttatggcatcaccgaagcgacaggggctctcaccttg
aacgacacagtcgcaagtggtaacacagcatcagctggaactcttctctccaatgtggaa
gccaaagttcttgacgttcgtagcggtgccgcgctgcctccaaactgccagggagaattg
tttttacgctctccgacaacgatgctcggctacattagcaatccggaggcaacgaagctt
agcataaccagcgatggttggctgagaactggagatcttgtttacttcgacgacgcgggg
aacttgttcgtggtggacaggatcaaagagctcatcaagtacaagacccttcaggtcgcc
ccggctgagctagaagcattgatattgacccatcctcttgtcttggatgctgctgtggta
gcgtccaaagacgaggaggctggggagattcccgtggcatttgtcgttcctagcgctgat
ggagagctcacggaggacgaagtgagagttttcgtcgctagaaatgtggctgctcacaag
agagtacgaagagtgactttcatcgatgcgattccaaagacgccgtcggggaagattttg
cgaaaggatctggcattaaaggcgtga
DBGET
integrated database retrieval system