Selaginella moellendorffii: SELMODRAFT_122588
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Entry
SELMODRAFT_122588 CDS
T01496
Symbol
CDKD-2
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03022
Basal transcription factors
smo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SELMODRAFT_122588 (CDKD-2)
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_122588 (CDKD-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smo01001
]
SELMODRAFT_122588 (CDKD-2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_122588 (CDKD-2)
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_122588 (CDKD-2)
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_122588 (CDKD-2)
Enzymes [BR:
smo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
SELMODRAFT_122588 (CDKD-2)
2.7.11.23 [RNA-polymerase]-subunit kinase
SELMODRAFT_122588 (CDKD-2)
Protein kinases [BR:
smo01001
]
Serine/threonine kinases: CMGC group
CDK family
SELMODRAFT_122588 (CDKD-2)
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SELMODRAFT_122588 (CDKD-2)
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
SELMODRAFT_122588 (CDKD-2)
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SELMODRAFT_122588 (CDKD-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
APH
Stirrup
Motif
Other DBs
NCBI-GeneID:
9653810
NCBI-ProteinID:
XP_002985716
JGI:
122588
UniProt:
D8RT90
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLELKNGIGAKRYVKGISLGEGTYGVVFKALDTQTNRTVAVKKIRLGKYKEGVHVTALRE
IKLLKELRDPNIIELIDVYPHKRNLHLVFEFMESDLEAVIRDRNILLSPADVKSYMQMCL
RGLAHCHKKWVLHRDLKPNNLLISSDGQLKLGDFGLARIFGSPDRKFTHQVFARWYRSPE
LLFGSKQYGSGVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFQAFGTPRETQWPDMTS
LPDYVEFQFTPAPALRSLFPMATEDALDLLSKMFAFDPKARITAQQALEHRYFSTDPAPT
KAHLLLRPASKAEGMRPPPELASPKEPVVLSPPAKARRISLFPGVAGAEHIHHSKESKDG
SSAATVGETPSDHSGMAITDRSYLKRKLDMDVHFEDERHV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctggaattgaagaacggcattggtgccaagcgatatgtcaaaggcatctctctggga
gaaggaacttatggagttgtgtttaaggctctggatacacagacaaatcgcacagtcgcc
gtaaaaaaaatccggctcggcaaatacaaggaaggagttcatgtcaccgcattgagggag
atcaaactcttgaaagagctccgcgatcccaacatcatcgagctcattgacgtttatcca
cacaaaagaaatctacatctggtctttgaatttatggagagcgatctggaagcagtgatc
cgtgaccgaaacattctcttatcgcccgcagacgtgaagtcttatatgcaaatgtgtctc
cggggactcgctcactgccataagaagtgggttttacacagggatttaaaacccaacaat
ctgcttatatcttccgatggacaactcaagcttggggattttggtctggctcgcattttt
gggagcccagacagaaagttcacacatcaggtttttgcacggtggtatcgttctcctgag
ttgctttttggaagcaagcagtatggatcgggagtggacatttgggccgcgggctgtatt
ttcgcagagttgcttcttcgcaggcctttcctacagggttcgagcgacatagaccaactt
ggaaagatattccaagcgtttggaactccgcgagagacgcagtggccggatatgacttcc
cttccagactatgtcgagttccagttcactccggcgcctgcactgcgctccctctttccc
atggcaacggaagacgccttggacctcctgtctaagatgttcgcctttgatcccaaagcg
aggataactgcacagcaggctttagagcacaggtatttttccacggaccctgctccaact
aaagctcacttgcttctgagaccagcttcaaaagccgagggtatgaggccaccaccggag
ctggcttctcccaaggaaccagtagtgctctcacctcctgccaaagcgaggaggatatct
ttgttccccggcgtcgcgggcgctgaacacatccatcactcgaaagaatcgaaagatggc
tctagcgcagccacggttggcgagacaccgagtgatcacagcggaatggcaattactgac
agatcttacctgaagagaaagcttgacatggatgttcatttcgaagatgagagacacgtt
tag
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integrated database retrieval system
