Selaginella moellendorffii: SELMODRAFT_141846
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Entry
SELMODRAFT_141846 CDS
T01496
Symbol
COP1L1-1
Name
(RefSeq) hypothetical protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
smo04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_141846 (COP1L1-1)
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
SELMODRAFT_141846 (COP1L1-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_141846 (COP1L1-1)
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_141846 (COP1L1-1)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SELMODRAFT_141846 (COP1L1-1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
SELMODRAFT_141846 (COP1L1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
WD40_like
Nup160
eIF2A
NBCH_WD40
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
9655312
NCBI-ProteinID:
XP_002963783
JGI:
141846
UniProt:
D8QWL1
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MCIMTHLNIKSNCPCCGAYLTSGQLYPNFLLNKILRKASVCQVASSASPGEHLRLALKQG
ADISMKDIDTLLSLLTEKKRKAEREEAETNLEVLHDFLQRSRQQKQQELNEIQTDLQWLK
EDIAAVEKQATSLKKSKERHASPVHQKLPSSRCRAKASEAEGRSPDGEKARLKRAQTDDE
GTSGVRESEVLSKKRRVLSQFEDLQDCYLQKRKQSQDPSETGESLSSHATGLEDFQAVLN
SFTRYSQLRVVAEVRHPDLFQNSNIVSSIEFDRDDEFFATAGVSRRIKVFEYSAVVNSSA
DVHYPAMEIPSRAKLSCLSWNKCIKHHIASSDYDGSVTIWDVNNAQSIMEYEEHAKRAWS
VDFARTDPNLLVSGSDDGKLKVWSTRQESSVMGIDMKANICCVKFNPSSSNFVAVGSADH
RIHYYDLRSPASPVHTFSGHQKTVSYVKFITPEELVSASTDSTLRIWNVRTNTPIRTLTG
HINERNFVGLSGNSDYVTCGSETNEVFVYHKAISRPATRHRFGSLDDSLHFISAVCWKSD
SPTLLAANSQGTIKVLVMAA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatcatgacgcatctaaacatcaagagcaactgtccctgctgtggagcttacttg
accagcggccagctctacccaaatttccttctcaacaagattttgaggaaggcgagtgtg
tgccaagttgccagctctgcgtcaccgggagagcacctgcggcttgctctcaaacaggga
gcagacatctcgatgaaagacatcgatacacttttgagtttgttgactgaaaagaaacgc
aaggccgaacgggaggaggctgaaacaaatttggaggtcttgcatgatttcttgcagcgg
tcaaggcaacagaagcagcaagagttaaacgagatacaaacagacctgcaatggctcaag
gaagacattgctgctgttgaaaagcaggcgactagcttgaagaaatccaaagaacgtcat
gcgtcgcctgttcaccaaaagcttcctagctctcgctgtcgcgccaaggcgtccgaagcg
gaagggagatccccggatggagaaaaagctcgtcttaagcgagcgcaaactgatgacgag
ggaacgtctggagtgagagaaagtgaggttctttcgaaaaagaggcgagtgctttctcag
tttgaagacctgcaagattgttatttgcaaaagcgaaagcaatcacaagatcctagtgag
acaggcgagagcttgtcgagtcatgccacaggattggaagacttccaagccgttcttaat
tctttcacgcgatacagccagctccgggtggtcgctgaagtacgacatcctgatcttttc
cagaattccaatatagtctccagcatagagtttgacagggacgacgagttcttcgctact
gcgggagtgtcccgtaggataaaagtgttcgagtactctgccgttgttaatagcagcgcg
gacgtgcattatccggcgatggagatcccttcgcgtgcgaagctcagctgcctcagctgg
aacaaatgcatcaaacaccacattgcgagcagcgactacgatgggagtgtcaccatatgg
gacgtgaataatgcgcagagtatcatggagtacgaagagcatgccaagcgagcgtggagt
gtcgattttgctagaaccgatcccaatttacttgtttctggcagtgacgatggcaagctc
aaagtgtggtctactcgacaggagagcagcgtcatgggaatcgacatgaaagccaacatc
tgctgcgtcaagttcaatcccagctccagcaattttgtagcggttggatcggccgatcac
cgcatacattactacgatttgcgctctcctgcttcgccagtccacacctttagcggccac
caaaagaccgtctcgtacgtgaagttcatcacgccggaggagctcgtgtccgcatcgact
gatagcaccttgcggatctggaatgtcagaaccaacactccgattagaacgctaactggg
catatcaacgagaggaacttcgttggtttgagcggtaacagtgactacgtaacctgtgga
agtgaaaccaacgaagtgttcgtgtatcacaaggcgatctctagaccagcaactcgacac
cgatttggaagcttagacgactcattgcatttcatcagcgccgtgtgttggaagagcgac
agtccaactttgttagccgccaatagccagggaaccatcaaagttctagttatggccgcc
taa
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