Selaginella moellendorffii: SELMODRAFT_182220
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Entry
SELMODRAFT_182220 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03253
translation initiation factor 3 subunit B
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_182220
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_182220
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_182220
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-3
SELMODRAFT_182220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
Motif
Other DBs
NCBI-GeneID:
9639907
NCBI-ProteinID:
XP_002986150
JGI:
182220
UniProt:
D8SS57
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAEVALPYRYDPQPPSPQQQPPRPGLNIDWSQVNLDEIQLPPGEDFGIKSEDEEEEEEIV
ESESGFGSIIVVDNLPVVEPAKYEKLENVVRKIFGQMGIIRTLFMPKDKATGKTAGFAFI
EYSSPQEAHTAREQADGYKLDKSHVFMVRMFDDIDKYMKVPEQWVAPEIKSYVPGENLLE
WLMDEKGRDQFVIRFGTETEVCWNDARLLKAETAYHRSFWTESFVQWSPLGTYLATIHRQ
GAVIWGGCTNFSRITRFIHQQVRLIDFSPSEKFLVTYSSHEPSNPRETQKVVLNVFDVRS
GKSHREFKGSADEFATGGTGGVAGVSWPVFRWSGGRDDKYFARIGKHCISVYETETMGLL
DKKSLKVDNVIDFSWSPTDSILALFVPEGNGGNQPARVSLVQIPGREELRQKNLFSVSDC
KMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEP
KGHRFAIIHGDGPRPDVTFYSMKSPNNVDRVTKLATLKGKQANALYWSPAGRFIVLAGLK
AYNGQLEFYNVDDLETMATAEHFMATDVDWDPAGRYVATSVTSVHQMENGFIIWSFHGKL
IYKVSRDRFFQFLWRPRPPSLLSSEEEAEIFRNLKQYSKRYDQEDIESSRFHSTQELEQR
RKLIEEWNGWLSSWKQMHEADKPYRQELRDGEPSDDEQEYEDEEVEIEEVIDVEEIKEED
LEA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtcgccctcccataccgctacgatccacagccgccgtcgccgcagcagcag
ccacccaggcctggcttgaacatcgactggtcgcaggtgaatctcgatgagattcagctc
cctccgggcgaggattttggaatcaagagtgaggatgaagaggaggaggaggagattgtg
gagagcgagtctggtttcgggagcataattgtcgtagacaatctcccggtggtggagcct
gccaagtatgagaagctcgaaaacgtggtacgcaagatttttggacaaatgggaatcatt
agaacgctcttcatgccgaaagacaaagcgactggcaaaacggcgggctttgctttcatc
gagtactccagtccccaggaggcccataccgctcgggaacaagccgatgggtataagctc
gacaagtctcacgtctttatggtgaggatgttcgatgacattgacaagtacatgaaagtt
cccgagcagtgggtagctccagagatcaagagctacgtgccaggggagaatcttctcgaa
tggctgatggacgagaaaggacgcgatcaatttgtgatacgatttggcacggagacagag
gtgtgctggaacgatgcccgtctgttgaaggccgagacggcatatcatcgatcgttctgg
acggaaagctttgttcaatggtctccccttggaacgtatctcgcaacaattcatcggcaa
ggtgctgtcatatggggtggatgcactaactttagccggatcactcgattcattcaccaa
caggtgcggctaattgacttctccccatccgaaaagttcctcgtaacgtacagcagccac
gaaccaagcaatccccgcgaaacacaaaaagtagtgcttaacgttttcgacgtacgaagt
ggtaaatcgcaccgagaattcaagggcagcgccgacgagtttgctactggtgggactgga
ggtgttgccggagtgtcttggccagtgttcaggtggtctggcggccgtgatgacaagtat
tttgcgcgtataggaaagcactgtataagtgtttacgagacagagaccatgggtttactg
gacaagaagtcgctgaaagttgacaatgttatagattttagctggtcaccaaccgattca
attctggccctttttgttccagaaggcaacggtggcaatcaacctgcgagggtcagcctg
gttcaaattcctggcagggaagaactgaggcagaagaaccttttcagtgtcagtgactgc
aagatgtactggcaaagcaacggagactatctagcagtcaaagttgaccggtatacaaag
acgaagaagagcacgtataccggttttgagctcttccggatcaaagaacgagacattcct
atcgaggtcttggagcttgagaacaaaaacgacaagattatcgccttcgcatgggaacca
aagggccacagattcgccatcattcatggagatggtcctcgtcccgacgtaacgttctac
tcgatgaaaagcccaaacaacgtggaccgtgtaaccaagcttgccacgctcaaaggaaag
caggcaaatgctctctactggtcgcctgcggggcgcttcattgtgctggcgggtctcaag
gcgtataacgggcagctcgagttctacaatgttgatgatctcgaaactatggcaacggca
gagcatttcatggcaactgatgtggattgggatcccgctggaagatatgtggctacttct
gttacttccgtgcaccaaatggagaacggcttcattatctggtctttccatgggaagctg
atatacaaggtttcaagggacagattcttccagttcttgtggcgccccaggcctccatct
ctccttagtagcgaagaggaagccgagatttttaggaacttgaaacagtattccaagagg
tatgaccaagaggacatagaatcgtcgaggttccacagcacccaggagttggagcagagg
aggaagctgattgaggagtggaacgggtggctgtcttcgtggaagcaaatgcacgaggcg
gacaagccttaccggcaggagcttcgtgatggcgagcccagcgacgacgagcaggagtac
gaagacgaagaggttgagattgaggaggtgattgatgtggaagagatcaaggaagaggac
cttgaggcgtaa
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