Selaginella moellendorffii: SELMODRAFT_441216
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Entry
SELMODRAFT_441216 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
smo
Selaginella moellendorffii
Pathway
smo03030
DNA replication
smo03420
Nucleotide excision repair
smo03430
Mismatch repair
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SELMODRAFT_441216
03420 Nucleotide excision repair
SELMODRAFT_441216
03430 Mismatch repair
SELMODRAFT_441216
03440 Homologous recombination
SELMODRAFT_441216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smo03000
]
SELMODRAFT_441216
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_441216
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_441216
Transcription factors [BR:
smo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
SELMODRAFT_441216
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SELMODRAFT_441216
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SELMODRAFT_441216
MMR (mismatch excision repair)
SELMODRAFT_441216
DSBR (double strand breaks repair)
HR (homologous recombination)
SELMODRAFT_441216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
DUF5521
Motif
Other DBs
NCBI-GeneID:
9631949
NCBI-ProteinID:
XP_002970633
JGI:
441216
UniProt:
D8RHE0
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MAQPSLTPNAIVALLGGDLELRPIVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAMLAT
QLNEVVKNGTLMKSSIVKLQEYICNTVKDRKIVIVLNLDVLVSNAEMSDQPPGAVVDPPG
PSGNQTASAVSSYGGRPAEVSSFGGRPTEVSSFGGRQAEATSFGGRPTETNSLGGRAAEG
SSIGGRTPEPGSFGGQATPAVSPYGRPAEPGSFGGQATPAVSPYGRPAEARRETVAYGGR
PAESIGSYAPNPPYGPPPTYTNRGPIARNEGPPGLVPIAALNPYHGRWTIKARITSKSDL
RRFNNARGDGRVFSFDLLDAEGGEIRVTCFNNVADEFYERAQVGRLYMVSKGSLRAAQKQ
FNHLKNDWEIMFEKDSVLDPCPEDSSVPQQVFDFKQVSEIENLPNNAMVDAIGVVVGVNQ
TTTIMRKNGTETQRRTLQLRDRSGKSVEITMWGNFCTQEGQHLQELCDSGQSPILAIKAG
RVSDFSGKSLGTISSTRFQINPDHPEARSLQLWFEREGRHAQAQSISREGAGGGGRTENR
KTVSQIKDEGLGRSEKPDFVTIRATIHFIKTDSFCYTACPLQIGDRQCSKKVTNNGDGTW
RCERCDRTVPECDYRYMLSIQVMDHTGATWLTGFQEAAEELLGVKAKDLFMWKQEDNGRF
LDHIASIQFTQHHFKVRIKEESFNDEQRVKVNIQRAEKLDFVAESKYMIDAIGKLRRGEP
INNTASFSAQTMSGMSGADAGYRATTGGGGYGGSASGYAGGGGYGGNAGGGGSSGGGYSG
YVGNSGGGRSGFGANSGSGYGGGGGFSANTGGGWL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccgtctctcacccccaatgcgattgtggcgctcctgggaggggacttggag
ctccggcccatcgtccaggtactggacgtgaagcagattgggtcgaatcagaacgtccaa
gagcgctatcgcttggtgctgtcggatgggaccgctgtgcagcaggccatgctcgccacg
cagctcaacgaggtcgtcaagaatggaaccttgatgaagagcagcatcgtgaagcttcaa
gagtacatttgcaacaccgtgaaagatagaaagatagtgattgtcctcaacttggatgtt
cttgtttcaaatgcagagatgagcgatcaacctcctggagcggtagttgatcctcctggt
cctagtgggaaccaaacagcgtccgctgtcagctcctacggtggaagaccagcagaggtg
agctccttcggtggaaggccaacggaagtgagctctttcgggggaagacaggcagaggct
acctctttcggtggaaggcctacagagacaaactctctaggtggaagagcagcagagggg
agctctatcggtggaagaacaccagagccgggttcttttggaggacaagcaactcccgct
gtgagtccttatggaaggccagcagagccgggttcttttggaggacaagcaactcccgct
gtgagtccttatggaaggccagcagaggctagaagagaaacagttgcgtacggtggaaga
ccggcagagtctatcgggtcttatgctccgaatcctccatatggaccgccgccaacttac
acgaatagagggcctattgcaaggaacgaggggccgcctggactcgttcctatagcagct
ttgaacccgtatcacggccgctggacgatcaaagcgaggatcacttctaagagcgacctc
cgtcgcttcaacaacgcccgaggtgatggcagggtgtttagcttcgatcttctggatgcc
gagggtggtgagatcagagttacttgcttcaacaacgttgcggacgagttttacgagcgt
gctcaggtcggtcggttgtatatggtctccaaaggatccctccgagcggcacagaagcag
ttcaatcacttgaagaacgactgggagattatgttcgagaaggactcagtgctcgacccg
tgtcctgaggactcgtcagttccgcagcaagtgtttgacttcaagcaggtcagtgagatc
gagaatctgccgaacaatgccatggttgacgccattggagtggtggtcggggtcaaccaa
acaacgactataatgagaaaaaacggtacagagacacaacggaggacgctgcagcttaga
gacaggtctggcaagagcgtcgagatcacaatgtggggcaacttttgtactcaagaagga
cagcacctccaggagctatgtgattcaggccaaagtcccatactggcaatcaaagcaggt
cgagtaagcgatttcagcggaaagagcctggggactatttcctcgacgcggttccaaatc
aatcccgatcatccagaagcacgttccctgcagttgtggtttgaacgcgagggtaggcac
gcacaggcgcagtctatttccagggaaggagcgggcggtggtggtcggacggagaaccgg
aagactgtgtcgcagattaaagacgagggacttggcagatcggagaagccagacttcgtc
actataagagcgaccatccactttataaagacggacagcttctgctacacagcatgcccg
ctgcaaattggagacaggcagtgcagcaaaaaggtgacgaacaatggagacggaacttgg
cggtgtgagcggtgtgaccgaaccgtccccgagtgcgactacagatatatgctctccatt
caagtgatggatcacacgggcgctacctggctcactggcttccaggaggccgcggaagaa
ctcttgggcgtgaaagccaaggacctctttatgtggaaacaggaggacaacggccggttc
cttgaccacattgccagcatccagttcacccagcaccatttcaaggtcaggatcaaggaa
gaaagtttcaacgacgagcagcgggtcaaagtaaatatccagcgagccgagaagttggat
ttcgtcgcggagagcaagtacatgattgacgcgatcgggaagctcaggagaggcgagcct
atcaacaacacggcgagcttctcggcgcaaacgatgagcggtatgtctggagcggacgct
gggtaccgcgctaccactggaggcggaggatatggcgggagtgcaagtggatacgctggt
ggaggtggctacggcggaaatgctggcggtggtggaagtagcggaggaggatacagtggc
tacgtcggcaactctggcggtggtagaagtggctttggtgccaactctggtagtggctat
ggtggcggtggcggattcagtgccaacactggcggtggatggctttga
DBGET
integrated database retrieval system
