Selaginella moellendorffii: SELMODRAFT_449292
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Entry
SELMODRAFT_449292 CDS
T01496
Symbol
XFB
Name
(RefSeq) hypothetical protein
KO
K14485
transport inhibitor response 1
Organism
smo
Selaginella moellendorffii
Pathway
smo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
SELMODRAFT_449292 (XFB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_449292 (XFB)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
SELMODRAFT_449292 (XFB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
F-box-like
LRR_8
LRR_6
Motif
Other DBs
NCBI-GeneID:
9637075
NCBI-ProteinID:
XP_002994052
JGI:
449292
UniProt:
D8TEP2
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MVESTRRRVPDDSRGLLCCIDDVLEKIFGYIKKPVERNAISAVCKRFHELEARTRHHVLV
YNMYAVNPMKLFERFPSVRSITIKGNPRLVDFDILPRDWAGHAGPWIAAIKAHPQLNRFR
IKRMTITDSQIEELCAACGPNLKIMQFDKCSGFSTQGLQALAKFCKNLTHLGLAQSMIDS
TSDTKWLKDLVNSCPALEYLDLSLIEMGDVDEAVLVKLAERCKLLKLWESETQNSERFLP
VLQKCSSNLSDLGIERINSNSETSLLAKCTALEGLSGIFDLVDDGMHAFMSVSSRLTRLD
LSYSNLTEVEIAEVLRACPNLQYLRVLDLAGDHGLQALGNSCKDLHRLVVESPSAIDGGV
VTHAGLMAVAQGCRNLQKLIFYPSFITNEAFYALAYNCPNLMDVRICLIQSSSTGENMPW
ECLDEGVTALVRECRSLYRLTLCFDVQADVEFLTDAGVAAIGEYGKKIRVLTLVHCGSSD
MGLVPVLRGCNKLQRLEIRKCRFGDESMQEIALNSELHLKHLFVQGCEVTIDGLSSLAYR
AKHTNSRFYVEVIGCKDGRCLEEHRYSCTDESCENHHAFSLSCSHWQILAYHSLTEPRDD
TPWFIHRFDSILSEASSLPFTRAEPGGALQLMPESSSGGIDLDLSTGGIDLNEDSSEPLQ
LMPESSGSGGGGGSGGIDLNEPAEESCSSFPGFERKEVFHFPDILERVAAEPTLHLGAPL
VLQASLL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatccaccaggaggcgggtgcctgacgattccaggggcctgctgtgctgcatc
gacgacgtcctggagaagatctttggctacatcaagaagcccgtggagagaaatgctatc
tcggctgtgtgcaagcggtttcacgagctggaagctcggacgaggcatcatgtcctggtc
tacaacatgtacgctgtcaaccccatgaagctgttcgagcgatttcccagcgtgagatcg
attaccatcaaagggaatcctcggctcgtggatttcgacatactccccagggattgggcc
ggccacgcaggaccttggattgcagctatcaaagctcatccccagcttaaccgcttccgg
atcaagaggatgacgatcaccgactctcagatcgaggagctctgtgctgcctgtggtccc
aacctcaagatcatgcagtttgacaagtgctccggctttagcacccagggtctccaagca
ctcgccaagttttgcaagaatcttacccacttgggacttgcacagtcgatgattgatagc
actagtgataccaaatggctcaaggacctggtaaactcgtgtcccgctctcgaatacctg
gacttgtcacttatagagatgggcgacgtggatgaagcggtgctggtgaagttggccgag
cgttgcaagctgcttaagctgtgggagtccgagactcaaaactccgagcggtttttgcct
gtgctgcaaaagtgctcttccaacttaagtgaccttgggatcgagcggatcaacagcaac
tccgagacgtcgttactggcgaagtgtactgcactggaggggctgtccggcatcttcgat
ctagtggacgatggaatgcacgcttttatgtcggtcagttctcgtttgacgaggctcgac
ctttcttactccaaccttaccgaggtggagatagcggaggtgcttcgagcctgtcctaac
ctgcagtatcttcgggtgttagacttggctggagaccacgggttgcaagcgctggggaac
tcttgcaaagacttacacaggcttgtcgttgagagtccttctgcaattgacggtggggtg
gtgacacacgccggccttatggctgttgcacaaggctgtagaaacctgcagaagctcatt
ttctatccatctttcatcaccaacgaagcgttttatgcgctcgcttacaactgcccgaac
ttgatggacgtgcgaatatgtctcatccagtcaagtagcactggcgagaacatgccatgg
gagtgcctggacgaaggggtgaccgcactcgtccgggaatgcagatcgctctaccgattg
acgctctgcttcgacgtccaggcggatgttgagttcctcaccgacgcgggcgtggctgca
attggcgaatatggaaagaagatcagggtgctgacccttgtccactgtggcagcagcgac
atgggattggtaccagttcttcgcggctgcaacaaacttcagaggcttgaaatccggaag
tgccgtttcggtgatgaaagcatgcaagaaatcgctttgaacagcgagctgcatctcaag
cacttgttcgtccaagggtgtgaagtgacgatagatgggctcagcagcctggcttaccgg
gccaagcacacaaactcgaggttctacgtggaagtgattggctgtaaagacgggcggtgc
ctggaggagcacaggtactcgtgcacggacgagtcttgcgagaaccaccacgccttctcg
ctcagctgctcccactggcagatcctggcataccattcactcacagagccccgcgacgac
actccatggtttatccaccgcttcgactcgattctctccgaggcttcttcgctgcctttc
acaagagctgaaccaggaggcgctcttcagctcatgccagagagcagtagcggtgggatt
gatcttgatctgagcaccggcgggatcgatctaaacgaagactcgtcggagccgctccag
ctgatgccggagagcagtggcagtggcggcggtggtggcagtggtgggattgatttgaac
gagccagcggaggagagttgctcgtcattcccaggatttgagaggaaggaagtcttccac
tttcccgacattctggagcgcgtagcggcagagccaacgttgcacttgggagctccattg
gtgctccaggcctccttactgtga
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integrated database retrieval system
