Selaginella moellendorffii: SELMODRAFT_61964
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Entry
SELMODRAFT_61964 CDS
T01496
Symbol
FY-1
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_61964 (FY-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_61964 (FY-1)
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SELMODRAFT_61964 (FY-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
9633955
NCBI-ProteinID:
XP_002965023
JGI:
61964
UniProt:
D8R1B2
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
KRIRKPVQRRSVDYTSTVLRYLQVRMWQQNYGQKPVLQPTTSAALDLLPTGAYLDNPATS
FSTKFVHCSTNKVRCSINRVLWTPTGRRLITGSQSGEFTLWNGLSFNFEMILQAHDSAVR
SMIWSHNENWMVTGDDGGCIKYWQTNMNNVKANKTAHREPVRDLSFSSTDLKFCSCSDDT
TVKIWDFARCQEERSLTGHGWDVKSVDWHPQKSLLVSGAKDNLVKLWDARTGRELCTLHG
HKNTVLCTKWNNNGNWVLTSSRDQVIKLFDIRTLKDIETYRGHKKEVASLAWHPFHEELF
VSGSHDGSIIHWLVGHDQPQAEVSNAHDNNILDLSWHPMGHILCSGGSDHTTKFWCRNRP
GDTTRDKYNAPLMQGASNEQMAPLGRGSGSVPMEASSLGSSFLGVGGAVDEGTIPGVGMA
MP
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
aagcgcattcgaaagcccgtgcagcgccgatccgtggattacacctctactgtcttgcgc
tacctccaggtacgaatgtggcagcaaaactatgggcaaaagccagtgctccagccaaca
acgtcggccgcgctggatcttcttccaacgggagcttatctcgacaatccggcaacgagt
ttcagcacaaagttcgtgcactgctcgactaacaaagtccgctgctcgatcaacagagtt
ttgtggactcctactggacgtcgtctcataacgggctcccagagtggagagtttactctc
tggaatgggttgtcgtttaacttcgagatgatcttacaggcgcatgatagtgccgtaagg
tcgatgatctggagccacaatgaaaactggatggttacgggcgacgacggtggatgtatc
aaatactggcaaacaaatatgaacaacgtaaaagcgaacaagacagctcacagagaaccg
gtacgagatttaagtttttcaagtacggatctgaagttctgctcgtgttccgatgatacc
acagtcaaaatctgggattttgcccggtgtcaagaagagcgttcattaactggtcacggc
tgggacgtgaagagtgtggattggcatccacaaaagtctctcctcgtttctggtgcgaag
gataatctcgtgaaattgtgggatgccaggacgggtcgtgaactctgtacactgcatggt
cacaagaatacagttctttgtacaaaatggaataacaatggaaattgggtgttaaccagc
tcaagggaccaagtaatcaagctgtttgacatccgaaccctgaaagatatcgagacttac
cgtggccataagaaagaagtagcatcattggcgtggcatcctttccacgaggaactcttt
gtgagcggaagccacgacggcagcattatacactggcttgttgggcacgatcaacctcag
gcagaagtctcaaatgctcacgacaacaacattctcgatctgtcctggcatcccatgggc
cacatactttgcagcggaggcagcgaccacaccacgaagttctggtgtcgaaatcgtccc
ggtgataccactcgcgacaagtacaacgcacctctcatgcaaggggcctcgaacgagcaa
atggcaccgctgggacgaggatctggatcggttccaatggaagcctcgagcttgggcagc
tcattcctgggtgttggaggtgctgttgacgaaggcaccatccccggcgttggcatggca
atgccg
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