KEGG   Sordaria macrospora: SMAC_00082Help
Entry
SMAC_00082        CDS       T01610                                 

Definition
(RefSeq) hypothetical protein
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
smp  Sordaria macrospora
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:smp00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SMAC_00082
Enzymes [BR:smp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SMAC_00082
DNA repair and recombination proteins [BR:smp03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     SMAC_00082
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
AA seq 1825 aa AA seqDB search
MATVNGKANVNRPVDAKQKEADVNRKLQFYGIASAFQHGKVPSNDQIDVALNSFLQSRAL
ANPSKKLSTEGQALVADFREVVRQAKNLLLSKNDGNLLQDFIWQTQQWDPKAVNVPGAPV
NKEQAQQHGNQALEGLRTLGTLIITNGQFRKLLKDATVLLRDIAGDAATNAAARVRPSQE
DLQQIDAPAADNTWHEKPELSRDQVKSKFNDFYKGNPKEDAKHIMGEATSAAHPDGSANP
RDLANTAAHDGRTGGSSGIDAQKGVSAAANTAQQKIDQNLDDETREKAKNKKEEYRARTR
EYFQKKVPQERREQTIWRLKKMVVECQQHPDYQRAITTLLNLAEEYGSHANRLAQGGTGT
VKETRTALAQAEGDLKTLIERFANGTSSDDLWASINTIYEDADRDPELKNWFKAMNSYIR
RCLREEGYILDDASNEEWNRLYDHGNYLLRNKYRAHTDRIVDELKFLADQFDQDPQNQSF
AASLNKLFADLGNDENGKPTFKPHLIKDLTDVIIPAMFENVAYIPVPRIEYSDPQIDAVI
ENLVLESDNFMPNVLEVASENYMRFGRKKIANKNRMAVDVKVAGIQMDLRDVSYYIKRKQ
GFPSLSDTGIFNILLEGDGFTFRMKMSSADAKDRQNFFKIDKVDVDVKNLRIKLVKSNHK
LLFNLFKPIMLKVLRPGLQKALEKAIRDQAARLDSMLYEIKQEADRALDEAREDPEKTPN
IYNRYVTAAQKKILQGKQKAQGVVADKKVNYAVTKEDSIFPHIHLPGGISSKATEYKDLA
RKGDKWESPVFSIGSAGKSHDIPGAPHVVRKPHAASNPHTASNPHAATNGAAHGSGNGYA
LHGGPGANVGNGGLNVPGGNYLPSDPAMGGHGMKTVGTAPNGRVAVVHISMEEADPHHMY
FQSSPLTRNPSFPNRPHNHSKTFPFSDLYRTLFNPLIDCKPSTSGGGPVRGPKPGRGGHF
SSTVSYHEQRRHIIERFMSRWRSEVGNDFYPAMRLILPDKDRDRGVYGLKENSIGRLLVK
VMKIDRNSEDGYNLMHWKLPGQSGISRSVGDFAGRVFEVVSKRAMRSEPGNMTVADVNVL
LDRLAGASGEAEQMPIFDEFYRQMNAEEVMWLVRIILKDMRVGATERTFLNLWHPDAEAL
FSVSSSLRRVCWELYDPEFRLEQQETGITLMQCFQSQLAQFQMTTTFDKLVKNLGVTEEG
QEFWIEEKLDGERMQMHMMEDDTVPGGFRFAFWSRKAKDYTYLYGESLGDEQSALTRHLR
NAFADGVRNLILDGEMITWDIDIDKMVPFGTLKTAALEQQKNPSKAGPRPLYRVFDIMLL
NDKPLTEYTLNDRRKALERAVVGVHRRLEILPFERATSPDAIEPLLRRVVAEASEGLVLK
NPRSRYSLNSRNNDWIKVKPEYMSEFGESMDCVVVGGYFGSGRRGGTLSSFLCGLRVSQN
LIESGKAATAEKCLSFFKVGGGLKAEDYAEIRHHTEGKWQDWDAANPPTEYIELGGGERL
QYEKPDVWIRPSDSVVISVKAASITPTDQFAMGWTLRFPRFRKLRLDRTWDSALDMDEFE
VLRSKIKDQEQERKKMEMESRKRKPATKRARKDLVIAGMSNPSLSSSATPFVAPRATREA
STHLFIGLDFCVLSESLKPNKMAKPALEKLIKDHGGRIYQQVVDRSGDQEKIIIPIADKN
VVKVASLKKAHPEMDIIRPKWVFDCLAQPMSRKEKGYLLPFEPIHIFHAGSEQTEQEAEE
AVDRFGDSYARDLADIDELKAVMEGMDQSDEYVSDSDWDSDSGSKKNRGGGFDMNHFLGH
LEAQGAASLDELRSFMFRRCRVFLL
NT seq 5478 nt NT seq  +upstreamnt  +downstreamnt
atggcgaccgtcaacggaaaggcaaacgtcaaccggccagttgatgccaagcagaaggag
gccgacgtcaaccgcaaacttcagttctacggaatcgccagcgctttccagcacggcaag
gttccttcgaacgaccaaatcgatgtcgcgttgaacagcttcctccagtccagggcgctc
gcaaacccatccaagaagctctccaccgagggacaggcgcttgttgccgatttccgggag
gttgtgagacaggccaagaatctcctgctctccaagaacgacggaaacctccttcaggat
ttcatttggcagacacagcaatgggaccccaaggctgtcaacgtccctggtgcccctgtg
aataaggaacaggcccagcagcatggcaaccaggccctcgagggattgcgcactctgggc
acccttattattaccaacggccagttccgtaagctgctcaaggatgccactgttctcctc
cgtgacatcgctggcgatgctgctaccaatgccgcagctcgcgtgagaccttcccaggag
gatctccagcagattgatgcgcccgctgccgataacacttggcacgagaagcctgagctt
tcccgcgatcaggtgaagagcaagttcaatgacttctacaagggaaaccccaaggaggac
gcaaagcacattatgggcgaggccacctctgctgctcaccctgatgggtctgccaacccc
agagatctagccaacaccgctgctcacgatggccgcactggcggctcttccggaatcgac
gctcagaagggtgtctctgctgctgcgaacaccgctcagcaaaagattgaccagaacctc
gatgatgagaccagggagaaggctaagaataagaaagaggagtacagggcccgcaccagg
gagtacttccagaagaaggttccccaggagcgtcgtgagcaaaccatttggcgcttgaag
aaaatggtcgttgaatgccagcaacaccctgattaccagcgtgcgattaccactttgctc
aacctcgccgaggagtacggtagccacgccaacagacttgctcaggggggcactggtact
gtgaaggagacccgtaccgctttggctcaggccgagggtgatctcaagaccctcatcgag
cgcttcgccaacggcacatccagcgatgatctgtgggcttctatcaacaccatctatgag
gatgccgacagagatcccgagttgaagaactggttcaaggctatgaatagctacattcgc
cgctgcctcagggaggagggctacattctcgacgatgcatccaacgaggagtggaaccgc
ctctacgaccacggcaactacctcctccgcaacaagtatcgcgcccatactgaccgcatt
gttgatgagctcaagttcttggccgatcagttcgaccaggatcctcaaaaccagagcttt
gcggcttccctcaacaagctgttcgccgacctgggcaacgatgagaacggcaagcctacc
ttcaagccccatctcatcaaggatttgaccgacgtaatcattcccgccatgttcgagaat
gttgcttacattccggttccccgtatcgagtactcggatccccagatcgacgccgtcatc
gagaatctcgtccttgaaagcgacaacttcatgcccaatgtcctcgaagttgctagtgaa
aactacatgcgctttggtcgcaagaagatcgccaacaagaacaggatggccgttgacgtc
aaggttgctggtatccagatggatctgcgcgatgtgagctactacatcaagcggaagcag
ggcttcccatcgctcagcgacaccggtatcttcaacattctgcttgaaggcgatggcttc
accttcaggatgaagatgtcttctgcagatgctaaggacaggcagaacttcttcaagatt
gacaaggtggatgtcgatgtcaagaacttgcgtatcaagttggtcaagtccaaccacaag
ctgcttttcaacctcttcaagcccatcatgctcaaggttctccgccctggcctccagaag
gctcttgagaaggccattcgcgaccaggctgccagacttgacagcatgctgtacgagatc
aagcaggaggctgacagggctcttgatgaggctcgtgaggatcccgagaaaactcccaac
atctacaaccgctacgtcacggcggctcagaagaagatcctccagggcaagcagaaggcc
cagggcgttgttgcagacaagaaggtcaactatgctgtcaccaaggaggacagcatattc
ccccacatccaccttcctggcggaatcagctccaaggccacggagtacaaggacctcgct
cgcaagggagacaagtgggagagccccgtcttctcaattggctctgctggcaagagccac
gacatccctggcgctcctcatgttgttcgcaagccgcacgctgccagtaacccgcacact
gccagtaacccgcacgctgccactaatggtgcagcccacggttctggcaacgggtacgcg
ctccacggcggtcctggcgcgaacgtcggcaacggtggcctgaacgttcccggtggcaac
taccttcctagcgaccctgctatgggcggccatggtatgaagactgtcggcactgcccct
aacggccgcgttgctgtcgttcacatctccatggaggaagcagatccccatcatatgtat
ttccaatccagtccactaacccgaaaccccagctttccaaaccgaccccataaccactcc
aaaaccttccccttctccgatctctaccgcaccctcttcaaccccctcatagactgcaaa
ccctccacctccgggggcggccctgtccgcggccccaagccaggtcggggcggccacttc
tcctccacggtatcttaccatgagcagcgccgccacatcatcgagcgcttcatgtcccgc
tggcgctccgaagtaggcaacgacttctatccggccatgcgcctgatcctgcccgacaag
gatcgcgatcgcggggtgtacgggctgaaggagaatagcattgggaggttgctggtgaag
gtgatgaagatcgatcgcaactccgaggatggatataatcttatgcactggaaattgcca
gggcagagcgggattagtaggtcggtgggcgactttgcggggagggtgtttgaggttgtc
agcaagcgggcgatgaggagcgagccgggaaacatgacggtggcggatgtcaatgttttg
cttgacaggctggcgggggccagtggcgaggcggagcagatgccgattttcgacgagttt
tacagacaaatgaatgccgaggaggtgatgtggttggtgaggatcattctcaaggatatg
agggtcggcgcgacggagcggacatttcttaacttgtggcatccggatgccgaggcgctg
tttagtgtgtcttcgagcttgaggagggtgtgttgggagttgtatgatccggagtttcgg
ctggagcagcaggagacggggatcacgctgatgcagtgcttccagtcgcagctggcgcag
tttcagatgacgacgacgtttgataaattggtgaagaatctgggcgttacagaggagggc
caggagttttggatcgaggagaagctggatggtgaaaggatgcagatgcatatgatggag
gacgataccgtgccgggagggttcaggtttgcgttttggtccaggaaggcgaaggattac
acatatctttatggcgagagcttgggcgatgagcagtccgctctgacacggcatctgcgc
aacgcctttgccgacggcgtaaggaacttgattcttgacggagagatgattacgtgggac
atcgatatcgacaagatggtcccctttggaacgctcaagacggccgcgctggagcagcaa
aagaacccatccaaggccggtcctcgtccgctttaccgtgtcttcgacatcatgctccta
aacgacaagccgcttaccgagtacaccctcaacgaccggcggaaagccctcgaacgcgcc
gtcgtcggcgtccaccgccgcttggagattcttcccttcgagcgagccacctccccagac
gccatcgagccgcttctacgacgagtcgtagccgaagcatcggagggtcttgtcctcaag
aacccgcgctcgcgttactcgctgaacagtcgcaacaacgactggatcaaggtcaaaccc
gagtacatgtccgagttcggcgagtcgatggactgcgtggtagtaggtggctacttcggc
tccggccggcgaggcggcacgctctcttccttcctctgcggtctgcgcgtctctcaaaac
ttgatcgaaagcggcaaagcagcgaccgccgaaaaatgtctttccttcttcaaagtcggc
ggcggtctcaaggcggaggactacgccgagatccggcatcacactgaagggaaatggcag
gactgggacgctgccaatccgcccacagaatacatcgagctcggcggaggagagaggttg
caatatgagaagccggacgtgtggatccgaccgagcgactcggtcgtcatctcagtgaaa
gccgccagcatcacgccaacggaccagttcgccatgggctggacgttgcggttcccacgg
ttccgtaagctgcggctggatcgcacgtgggactcggcgctggacatggacgagtttgaa
gtcctacgatccaagatcaaggaccaggaacaggaacgcaaaaagatggagatggagagt
cgcaagcggaaaccggcaaccaagcgcgccaggaaagatctggttattgcgggcatgtct
aatccctccttgtcatcttctgctacacccttcgttgccccgcgagcaacgcgcgaagcc
agcacccacttattcataggcttggacttttgcgtcctttcagagtctctcaaaccaaac
aagatggccaagccagctttggagaaactcataaaagaccacggcggccgcatctaccag
caggtggtagaccgctctggtgaccaggaaaagataatcatccccatagcagataagaac
gtggtcaaagtggcttccctcaaaaaggcccacccggagatggacatcatcaggccgaaa
tgggtgtttgactgtcttgcgcagccaatgtcacgaaaggaaaagggttacctcctcccc
tttgaacctatccacatcttccacgctggtagcgaacaaacagagcaagaagcagaagaa
gcagtggatagatttggagatagctacgctcgtgacttggctgacatagacgagttgaag
gcggttatggaggggatggaccagtctgatgagtatgtttctgactcggactgggattcg
gattccggttctaagaagaacagaggaggagggttcgatatgaatcacttccttggccac
ctagaagcgcagggcgcggcttcgctggatgagttgcgctcgttcatgtttcggcggtgc
cgggtttttttgctttag

DBGET integrated database retrieval system