Sordaria macrospora: SMAC_00082 Help Entry SMAC_00082        CDS       T01610                                  Name (RefSeq) uncharacterized protein   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism smp  Sordaria macrospora Pathway smp03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:smp00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     SMAC_00082  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:smp03400]     SMAC_00082 Enzymes [BR:smp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      SMAC_00082 DNA repair and recombination proteins [BR:smp03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      SMAC_00082 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF5923 DUF4449 DNA_ligase_A_M DNA_ligase_A_N RNA_ligase DNA_ligase_A_C BRCT_2 DNA_ligase_IV BRCT Motif Other DBs NCBI-GeneID:  10809135 NCBI-ProteinID:  XP_003351540 UniProt:  F7VK39 LinkDB All DBs Position Unknown AA seq 1825 aa AA seqDB search MATVNGKANVNRPVDAKQKEADVNRKLQFYGIASAFQHGKVPSNDQIDVALNSFLQSRAL ANPSKKLSTEGQALVADFREVVRQAKNLLLSKNDGNLLQDFIWQTQQWDPKAVNVPGAPV NKEQAQQHGNQALEGLRTLGTLIITNGQFRKLLKDATVLLRDIAGDAATNAAARVRPSQE DLQQIDAPAADNTWHEKPELSRDQVKSKFNDFYKGNPKEDAKHIMGEATSAAHPDGSANP RDLANTAAHDGRTGGSSGIDAQKGVSAAANTAQQKIDQNLDDETREKAKNKKEEYRARTR EYFQKKVPQERREQTIWRLKKMVVECQQHPDYQRAITTLLNLAEEYGSHANRLAQGGTGT VKETRTALAQAEGDLKTLIERFANGTSSDDLWASINTIYEDADRDPELKNWFKAMNSYIR RCLREEGYILDDASNEEWNRLYDHGNYLLRNKYRAHTDRIVDELKFLADQFDQDPQNQSF AASLNKLFADLGNDENGKPTFKPHLIKDLTDVIIPAMFENVAYIPVPRIEYSDPQIDAVI ENLVLESDNFMPNVLEVASENYMRFGRKKIANKNRMAVDVKVAGIQMDLRDVSYYIKRKQ GFPSLSDTGIFNILLEGDGFTFRMKMSSADAKDRQNFFKIDKVDVDVKNLRIKLVKSNHK LLFNLFKPIMLKVLRPGLQKALEKAIRDQAARLDSMLYEIKQEADRALDEAREDPEKTPN IYNRYVTAAQKKILQGKQKAQGVVADKKVNYAVTKEDSIFPHIHLPGGISSKATEYKDLA RKGDKWESPVFSIGSAGKSHDIPGAPHVVRKPHAASNPHTASNPHAATNGAAHGSGNGYA LHGGPGANVGNGGLNVPGGNYLPSDPAMGGHGMKTVGTAPNGRVAVVHISMEEADPHHMY FQSSPLTRNPSFPNRPHNHSKTFPFSDLYRTLFNPLIDCKPSTSGGGPVRGPKPGRGGHF SSTVSYHEQRRHIIERFMSRWRSEVGNDFYPAMRLILPDKDRDRGVYGLKENSIGRLLVK VMKIDRNSEDGYNLMHWKLPGQSGISRSVGDFAGRVFEVVSKRAMRSEPGNMTVADVNVL LDRLAGASGEAEQMPIFDEFYRQMNAEEVMWLVRIILKDMRVGATERTFLNLWHPDAEAL FSVSSSLRRVCWELYDPEFRLEQQETGITLMQCFQSQLAQFQMTTTFDKLVKNLGVTEEG QEFWIEEKLDGERMQMHMMEDDTVPGGFRFAFWSRKAKDYTYLYGESLGDEQSALTRHLR NAFADGVRNLILDGEMITWDIDIDKMVPFGTLKTAALEQQKNPSKAGPRPLYRVFDIMLL NDKPLTEYTLNDRRKALERAVVGVHRRLEILPFERATSPDAIEPLLRRVVAEASEGLVLK NPRSRYSLNSRNNDWIKVKPEYMSEFGESMDCVVVGGYFGSGRRGGTLSSFLCGLRVSQN LIESGKAATAEKCLSFFKVGGGLKAEDYAEIRHHTEGKWQDWDAANPPTEYIELGGGERL QYEKPDVWIRPSDSVVISVKAASITPTDQFAMGWTLRFPRFRKLRLDRTWDSALDMDEFE VLRSKIKDQEQERKKMEMESRKRKPATKRARKDLVIAGMSNPSLSSSATPFVAPRATREA STHLFIGLDFCVLSESLKPNKMAKPALEKLIKDHGGRIYQQVVDRSGDQEKIIIPIADKN VVKVASLKKAHPEMDIIRPKWVFDCLAQPMSRKEKGYLLPFEPIHIFHAGSEQTEQEAEE AVDRFGDSYARDLADIDELKAVMEGMDQSDEYVSDSDWDSDSGSKKNRGGGFDMNHFLGH LEAQGAASLDELRSFMFRRCRVFLL NT seq 5478 nt NT seq  +upstreamnt  +downstreamnt atggcgaccgtcaacggaaaggcaaacgtcaaccggccagttgatgccaagcagaaggag gccgacgtcaaccgcaaacttcagttctacggaatcgccagcgctttccagcacggcaag gttccttcgaacgaccaaatcgatgtcgcgttgaacagcttcctccagtccagggcgctc gcaaacccatccaagaagctctccaccgagggacaggcgcttgttgccgatttccgggag gttgtgagacaggccaagaatctcctgctctccaagaacgacggaaacctccttcaggat ttcatttggcagacacagcaatgggaccccaaggctgtcaacgtccctggtgcccctgtg aataaggaacaggcccagcagcatggcaaccaggccctcgagggattgcgcactctgggc acccttattattaccaacggccagttccgtaagctgctcaaggatgccactgttctcctc cgtgacatcgctggcgatgctgctaccaatgccgcagctcgcgtgagaccttcccaggag gatctccagcagattgatgcgcccgctgccgataacacttggcacgagaagcctgagctt tcccgcgatcaggtgaagagcaagttcaatgacttctacaagggaaaccccaaggaggac gcaaagcacattatgggcgaggccacctctgctgctcaccctgatgggtctgccaacccc agagatctagccaacaccgctgctcacgatggccgcactggcggctcttccggaatcgac gctcagaagggtgtctctgctgctgcgaacaccgctcagcaaaagattgaccagaacctc gatgatgagaccagggagaaggctaagaataagaaagaggagtacagggcccgcaccagg gagtacttccagaagaaggttccccaggagcgtcgtgagcaaaccatttggcgcttgaag aaaatggtcgttgaatgccagcaacaccctgattaccagcgtgcgattaccactttgctc aacctcgccgaggagtacggtagccacgccaacagacttgctcaggggggcactggtact gtgaaggagacccgtaccgctttggctcaggccgagggtgatctcaagaccctcatcgag cgcttcgccaacggcacatccagcgatgatctgtgggcttctatcaacaccatctatgag gatgccgacagagatcccgagttgaagaactggttcaaggctatgaatagctacattcgc cgctgcctcagggaggagggctacattctcgacgatgcatccaacgaggagtggaaccgc ctctacgaccacggcaactacctcctccgcaacaagtatcgcgcccatactgaccgcatt gttgatgagctcaagttcttggccgatcagttcgaccaggatcctcaaaaccagagcttt gcggcttccctcaacaagctgttcgccgacctgggcaacgatgagaacggcaagcctacc ttcaagccccatctcatcaaggatttgaccgacgtaatcattcccgccatgttcgagaat gttgcttacattccggttccccgtatcgagtactcggatccccagatcgacgccgtcatc gagaatctcgtccttgaaagcgacaacttcatgcccaatgtcctcgaagttgctagtgaa aactacatgcgctttggtcgcaagaagatcgccaacaagaacaggatggccgttgacgtc aaggttgctggtatccagatggatctgcgcgatgtgagctactacatcaagcggaagcag ggcttcccatcgctcagcgacaccggtatcttcaacattctgcttgaaggcgatggcttc accttcaggatgaagatgtcttctgcagatgctaaggacaggcagaacttcttcaagatt gacaaggtggatgtcgatgtcaagaacttgcgtatcaagttggtcaagtccaaccacaag ctgcttttcaacctcttcaagcccatcatgctcaaggttctccgccctggcctccagaag gctcttgagaaggccattcgcgaccaggctgccagacttgacagcatgctgtacgagatc aagcaggaggctgacagggctcttgatgaggctcgtgaggatcccgagaaaactcccaac atctacaaccgctacgtcacggcggctcagaagaagatcctccagggcaagcagaaggcc cagggcgttgttgcagacaagaaggtcaactatgctgtcaccaaggaggacagcatattc ccccacatccaccttcctggcggaatcagctccaaggccacggagtacaaggacctcgct cgcaagggagacaagtgggagagccccgtcttctcaattggctctgctggcaagagccac gacatccctggcgctcctcatgttgttcgcaagccgcacgctgccagtaacccgcacact gccagtaacccgcacgctgccactaatggtgcagcccacggttctggcaacgggtacgcg ctccacggcggtcctggcgcgaacgtcggcaacggtggcctgaacgttcccggtggcaac taccttcctagcgaccctgctatgggcggccatggtatgaagactgtcggcactgcccct aacggccgcgttgctgtcgttcacatctccatggaggaagcagatccccatcatatgtat ttccaatccagtccactaacccgaaaccccagctttccaaaccgaccccataaccactcc aaaaccttccccttctccgatctctaccgcaccctcttcaaccccctcatagactgcaaa ccctccacctccgggggcggccctgtccgcggccccaagccaggtcggggcggccacttc tcctccacggtatcttaccatgagcagcgccgccacatcatcgagcgcttcatgtcccgc tggcgctccgaagtaggcaacgacttctatccggccatgcgcctgatcctgcccgacaag gatcgcgatcgcggggtgtacgggctgaaggagaatagcattgggaggttgctggtgaag gtgatgaagatcgatcgcaactccgaggatggatataatcttatgcactggaaattgcca gggcagagcgggattagtaggtcggtgggcgactttgcggggagggtgtttgaggttgtc agcaagcgggcgatgaggagcgagccgggaaacatgacggtggcggatgtcaatgttttg cttgacaggctggcgggggccagtggcgaggcggagcagatgccgattttcgacgagttt tacagacaaatgaatgccgaggaggtgatgtggttggtgaggatcattctcaaggatatg agggtcggcgcgacggagcggacatttcttaacttgtggcatccggatgccgaggcgctg tttagtgtgtcttcgagcttgaggagggtgtgttgggagttgtatgatccggagtttcgg ctggagcagcaggagacggggatcacgctgatgcagtgcttccagtcgcagctggcgcag tttcagatgacgacgacgtttgataaattggtgaagaatctgggcgttacagaggagggc caggagttttggatcgaggagaagctggatggtgaaaggatgcagatgcatatgatggag gacgataccgtgccgggagggttcaggtttgcgttttggtccaggaaggcgaaggattac acatatctttatggcgagagcttgggcgatgagcagtccgctctgacacggcatctgcgc aacgcctttgccgacggcgtaaggaacttgattcttgacggagagatgattacgtgggac atcgatatcgacaagatggtcccctttggaacgctcaagacggccgcgctggagcagcaa aagaacccatccaaggccggtcctcgtccgctttaccgtgtcttcgacatcatgctccta aacgacaagccgcttaccgagtacaccctcaacgaccggcggaaagccctcgaacgcgcc gtcgtcggcgtccaccgccgcttggagattcttcccttcgagcgagccacctccccagac gccatcgagccgcttctacgacgagtcgtagccgaagcatcggagggtcttgtcctcaag aacccgcgctcgcgttactcgctgaacagtcgcaacaacgactggatcaaggtcaaaccc gagtacatgtccgagttcggcgagtcgatggactgcgtggtagtaggtggctacttcggc tccggccggcgaggcggcacgctctcttccttcctctgcggtctgcgcgtctctcaaaac ttgatcgaaagcggcaaagcagcgaccgccgaaaaatgtctttccttcttcaaagtcggc ggcggtctcaaggcggaggactacgccgagatccggcatcacactgaagggaaatggcag gactgggacgctgccaatccgcccacagaatacatcgagctcggcggaggagagaggttg caatatgagaagccggacgtgtggatccgaccgagcgactcggtcgtcatctcagtgaaa gccgccagcatcacgccaacggaccagttcgccatgggctggacgttgcggttcccacgg ttccgtaagctgcggctggatcgcacgtgggactcggcgctggacatggacgagtttgaa gtcctacgatccaagatcaaggaccaggaacaggaacgcaaaaagatggagatggagagt cgcaagcggaaaccggcaaccaagcgcgccaggaaagatctggttattgcgggcatgtct aatccctccttgtcatcttctgctacacccttcgttgccccgcgagcaacgcgcgaagcc agcacccacttattcataggcttggacttttgcgtcctttcagagtctctcaaaccaaac aagatggccaagccagctttggagaaactcataaaagaccacggcggccgcatctaccag caggtggtagaccgctctggtgaccaggaaaagataatcatccccatagcagataagaac gtggtcaaagtggcttccctcaaaaaggcccacccggagatggacatcatcaggccgaaa tgggtgtttgactgtcttgcgcagccaatgtcacgaaaggaaaagggttacctcctcccc tttgaacctatccacatcttccacgctggtagcgaacaaacagagcaagaagcagaagaa gcagtggatagatttggagatagctacgctcgtgacttggctgacatagacgagttgaag gcggttatggaggggatggaccagtctgatgagtatgtttctgactcggactgggattcg gattccggttctaagaagaacagaggaggagggttcgatatgaatcacttccttggccac ctagaagcgcagggcgcggcttcgctggatgagttgcgctcgttcatgtttcggcggtgc cgggtttttttgctttag

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