Sordaria macrospora: SMAC_00122
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Entry
SMAC_00122 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SMAC_00122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
SMAC_00122
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SMAC_00122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
10809174
NCBI-ProteinID:
XP_024510982
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MSYEHRGDHDKGYGGGGGHDGPPRNRGRRPVTDYGASVVHYMRHRQPRYRGSYAGEVERP
SPSYIVDILPPYARVTNPADSVPSRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFT
LWNGTGFNFETIMQAHDSAIRALVYSHSDDWLVSADHDGFIKYWQPNFNNVESIRGHTDP
IRDLAFSPNDTKFVTASDDQTLKVFDFAGGTTDMTLTGHGWDAKSCDWHPSKGLIVSGSK
DHLVKLWDPRTGRCLTTLHGHKNTITKTLFERVQGNCLATSARDQTARVFDLRMMRDIAL
LRGHEKDISTLTWHPVHSNLLSTGGNDGSLFHYLLDEPNTAPDGSVMPIPAVYDSTDPSS
APAQPIYPAHRIPYAHDFAIWSLDWHPLGHILASGSNDRITRFWSRARPGEAPESFNDRY
HIGEAAAEAQGTWDRRGGRHMRQVEEEQELEDEMDGLVDQKMPIKGQPGVGGGGMPMPGL
SFPSIPGLPLQQVPGGGVMPPPPLIPGVGGTAGVPPPLPFHIPGMPGLPAGVPPPPIPGF
DLKNPPDPSVIAEMMKKHGIQPPPPPGSVGAPMPPPGMLPPGLIPPPGATGFPMPPPGFA
PPPSIPGGVMIPGGVTHADGGNDQYDSSGRRRAPLPSQEESLRMEQSKGNYTRIR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgagcacaggggagatcatgacaagggctatggagggggaggagggcacgac
ggcccgccccgaaatagaggcagacgccccgtcaccgactatggtgcttcagtagttcac
tacatgcgccacaggcaaccgagataccgaggatcgtatgctggagaagttgaaaggccc
agtcctagttatattgtggatattctaccaccgtacgcccgagtcaccaacccagcagac
tcggtaccatcacggcatcttcactcttccctcaacaaaatcaagcaccctatcaatgtt
gtacgatggacgccagagggacgaaggttgttgactgctagcagcagtggagagtttacg
ctctggaacggcactggattcaacttcgaaacgatcatgcaggcccatgattctgccatt
cgtgctctagtatattcccacagcgacgactggctcgtgtctgcagatcacgacggtttc
atcaaatattggcagccgaatttcaacaacgtcgagagcattaggggtcatacagatccc
atccgcgacctcgccttcagccccaacgacaccaaattcgtcacggcatcagatgatcag
acactcaaagtctttgactttgctggcggcacgacggatatgaccttgacagggcatggt
tgggacgcgaaaagttgcgactggcatcccagtaaaggcctgattgtctctggttcgaaa
gatcatttggtcaagctgtgggatcccaggacaggtagatgcctgacaacgcttcacggg
cacaagaacaccatcaccaaaaccctcttcgagagggtccaaggaaactgcctggcaact
tcggccagggaccaaacagctcgagttttcgatctccgaatgatgcgggacatcgctctt
cttaggggccacgaaaaggacatatcgaccttgacgtggcatccagtccactccaacctc
ctaagcaccggcggcaacgacggctcgctattccactacctccttgacgagccgaacacc
gcacccgacggctcagttatgccgattccggcagtttacgacagcaccgacccttcctct
gcacctgcccaacccatctacccagcccatagaatcccttacgcccacgacttcgccatc
tggtcgctcgactggcatccgctcggccacatcctcgcctcgggatccaacgatcgcatc
acccgcttctggtcccgtgccagacccggcgaagctcccgagtccttcaacgaccggtat
cacatcggcgaagcagccgccgaagcccaaggcacctgggaccgccgcggcggccgtcac
atgcggcaagtcgaagaggagcaggagctggaggacgagatggacggcctggtggaccag
aagatgcccattaaggggcagcccggcgtcggcggcggcggaatgcctatgcccggtctt
tccttccccagcattcccggccttcctctccagcaagttcctggcggcggtgttatgccg
ccgccgcccctcatccctggcgtcggcggtaccgcgggtgtgccgcctcctctcccgttc
cacatacccggcatgcccggtctgcctgctggtgtccccccgccgcccattcccggcttt
gacctgaagaatcctcccgacccgagcgtgatcgccgagatgatgaagaagcacggaatc
caaccgccgccgccgccaggctcagttggtgcaccgatgccgcctcccggaatgctacct
cctggccttatccccccgccgggcgccacgggcttccctatgccccctcctgggttcgcg
cctccgccgtcgattcccggtggtgttatgatcccaggaggagttactcacgcggacggt
ggtaacgaccagtatgactcttcgggcaggagacgcgcgccgctgcctagccaggaagag
agcctgaggatggagcagagcaagggcaattatacgcgtataagataa
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